RNA–Protein interactions for RNA: ENST00000560920.6

TRIP4-211, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-211ENST00000560920 A0A0U1RQG5 324 aaPredicted RBP22.29■■□□□ 1.16
TRIP4-211ENST00000560920 ACRP10323 421 aa22.29■■□□□ 1.16
TRIP4-211ENST00000560920 GIMAP6Q6P9H5 292 aa22.29■■□□□ 1.16
TRIP4-211ENST00000560920 ZNF365Q70YC5 407 aa22.29■■□□□ 1.16
TRIP4-211ENST00000560920 ARMCX2Q7L311 632 aa22.29■■□□□ 1.16
TRIP4-211ENST00000560920 FAM126BQ8IXS8 530 aa22.29■■□□□ 1.16
TRIP4-211ENST00000560920 SPC25Q9HBM1 224 aa22.29■■□□□ 1.16
TRIP4-211ENST00000560920 SMARCA5O60264 1052 aaPredicted RBP22.28■■□□□ 1.16
TRIP4-211ENST00000560920 NKX3-2P78367 333 aa22.28■■□□□ 1.16
TRIP4-211ENST00000560920 CCDC174Q6PII3 467 aa22.28■■□□□ 1.16
TRIP4-211ENST00000560920 CCDC144CPQ8IYA2 1237 aa22.28■■□□□ 1.16
TRIP4-211ENST00000560920 TMEM199Q8N511 208 aa22.28■■□□□ 1.16
TRIP4-211ENST00000560920 CHST13Q8NET6 341 aa22.28■■□□□ 1.16
TRIP4-211ENST00000560920 OSBP2Q969R2 916 aa22.28■■□□□ 1.16
TRIP4-211ENST00000560920 PPP1R12CQ9BZL4 782 aa22.28■■□□□ 1.16
TRIP4-211ENST00000560920 FEM1BQ9UK73 627 aa22.28■■□□□ 1.16
TRIP4-211ENST00000560920 CTDP1Q9Y5B0 961 aaPredicted RBP22.28■■□□□ 1.16
TRIP4-211ENST00000560920 CD4P01730 458 aa22.27■■□□□ 1.16
TRIP4-211ENST00000560920 CCDC129Q6ZRS4 1044 aa22.27■■□□□ 1.16
TRIP4-211ENST00000560920 CEP95Q96GE4 821 aa22.27■■□□□ 1.16
TRIP4-211ENST00000560920 LRRCC1Q9C099 1032 aa22.27■■□□□ 1.16
TRIP4-211ENST00000560920 PRDM12Q9H4Q4 367 aa22.27■■□□□ 1.16
TRIP4-211ENST00000560920 MTMR4Q9NYA4 1195 aa22.27■■□□□ 1.16
TRIP4-211ENST00000560920 FBXO40Q9UH90 709 aa22.27■■□□□ 1.16
TRIP4-211ENST00000560920 MYO9BQ13459 2157 aa22.26■■□□□ 1.15
TRIP4-211ENST00000560920 MYH4Q9Y623 1939 aa22.26■■□□□ 1.15
TRIP4-211ENST00000560920 TNFRSF10AO00220 468 aa22.26■■□□□ 1.15
TRIP4-211ENST00000560920 PRDM1O75626 825 aa22.26■■□□□ 1.15
TRIP4-211ENST00000560920 CYP2C18P33260 490 aa22.26■■□□□ 1.15
TRIP4-211ENST00000560920 OAZ1P54368 228 aa22.26■■□□□ 1.15
TRIP4-211ENST00000560920 CNTN2Q02246 1040 aa22.26■■□□□ 1.15
TRIP4-211ENST00000560920 PPM1EQ8WY54 764 aa22.26■■□□□ 1.15
TRIP4-211ENST00000560920 EPB41L4AQ9HCS5 686 aaPredicted RBP22.26■■□□□ 1.15
TRIP4-211ENST00000560920 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.25■■□□□ 1.15
TRIP4-211ENST00000560920 BEX3Q00994 111 aa22.25■■□□□ 1.15
TRIP4-211ENST00000560920 AKNAD1Q5T1N1 836 aa22.25■■□□□ 1.15
TRIP4-211ENST00000560920 PSRC1Q6PGN9 363 aaPredicted RBP22.25■■□□□ 1.15
TRIP4-211ENST00000560920 ZNF444Q8N0Y2 327 aaPredicted RBP22.25■■□□□ 1.15
TRIP4-211ENST00000560920 LRRC47Q8N1G4 583 aaKnown RBP22.25■■□□□ 1.15
TRIP4-211ENST00000560920 FAM133AQ8N9E0 248 aa22.25■■□□□ 1.15
TRIP4-211ENST00000560920 KBTBD3Q8NAB2 608 aa22.25■■□□□ 1.15
TRIP4-211ENST00000560920 SLC43A3Q8NBI5 491 aa22.25■■□□□ 1.15
TRIP4-211ENST00000560920 GMCL1P1Q8NEA9 526 aa22.25■■□□□ 1.15
TRIP4-211ENST00000560920 GAS2L1Q99501 681 aaPredicted RBP22.25■■□□□ 1.15
TRIP4-211ENST00000560920 ECHDC1Q9NTX5 307 aa22.25■■□□□ 1.15
TRIP4-211ENST00000560920 CHD9Q3L8U1 2897 aa22.25■■□□□ 1.15
TRIP4-211ENST00000560920 ASTN1O14525 1302 aa22.25■■□□□ 1.15
TRIP4-211ENST00000560920 TLR3O15455 904 aaKnown RBP22.24■■□□□ 1.15
TRIP4-211ENST00000560920 ADGRE1Q14246 886 aa22.24■■□□□ 1.15
TRIP4-211ENST00000560920 HERVK_113Q902F9 699 aa22.24■■□□□ 1.15
TRIP4-211ENST00000560920 APPBP2Q92624 585 aa22.24■■□□□ 1.15
TRIP4-211ENST00000560920 IL23AQ9NPF7 189 aa22.24■■□□□ 1.15
TRIP4-211ENST00000560920 HOMER2Q9NSB8 354 aa22.24■■□□□ 1.15
TRIP4-211ENST00000560920 CXXC1Q9P0U4 656 aaPredicted RBP22.24■■□□□ 1.15
TRIP4-211ENST00000560920 SYNPO2Q9UMS6 1093 aa22.24■■□□□ 1.15
TRIP4-211ENST00000560920 RNF113AO15541 343 aaKnown RBP22.23■■□□□ 1.15
TRIP4-211ENST00000560920 TTLL1O95922 423 aa22.23■■□□□ 1.15
TRIP4-211ENST00000560920 BMP3P12645 472 aa22.23■■□□□ 1.15
TRIP4-211ENST00000560920 TNFAIP2Q03169 654 aa22.23■■□□□ 1.15
TRIP4-211ENST00000560920 SLFN13Q68D06 897 aa22.23■■□□□ 1.15
TRIP4-211ENST00000560920 CXCL17Q6UXB2 119 aa22.23■■□□□ 1.15
TRIP4-211ENST00000560920 ATXN2LQ8WWM7 1075 aaKnown RBP22.23■■□□□ 1.15
TRIP4-211ENST00000560920 GNEQ9Y223 722 aaKnown RBP22.23■■□□□ 1.15
TRIP4-211ENST00000560920 SOWAHBA6NEL2 793 aa22.22■■□□□ 1.15
TRIP4-211ENST00000560920 GPAA1O43292 621 aa22.22■■□□□ 1.15
TRIP4-211ENST00000560920 ZNF536O15090 1300 aa22.22■■□□□ 1.15
TRIP4-211ENST00000560920 GRIN2DO15399 1336 aa22.22■■□□□ 1.15
TRIP4-211ENST00000560920 TMEM232C9JQI7 657 aa22.21■■□□□ 1.15
TRIP4-211ENST00000560920 M0R2C6 588 aa22.21■■□□□ 1.15
TRIP4-211ENST00000560920 FGBP02675 491 aa22.21■■□□□ 1.15
TRIP4-211ENST00000560920 PTGS1P23219 599 aa22.21■■□□□ 1.15
TRIP4-211ENST00000560920 TDO2P48775 406 aa22.21■■□□□ 1.15
TRIP4-211ENST00000560920 MIER1Q8N108 512 aa22.21■■□□□ 1.15
TRIP4-211ENST00000560920 NEDD1Q8NHV4 660 aa22.21■■□□□ 1.15
TRIP4-211ENST00000560920 AGBL1Q96MI9 1066 aa22.21■■□□□ 1.15
TRIP4-211ENST00000560920 ASB2Q96Q27 587 aa22.21■■□□□ 1.15
TRIP4-211ENST00000560920 CHMP4BQ9H444 224 aaKnown RBP22.21■■□□□ 1.15
TRIP4-211ENST00000560920 ACAD9Q9H845 621 aa22.21■■□□□ 1.15
TRIP4-211ENST00000560920 ZNF287Q9HBT7 754 aa22.21■■□□□ 1.15
TRIP4-211ENST00000560920 A1CFQ9NQ94 594 aaKnown RBP22.21■■□□□ 1.15
TRIP4-211ENST00000560920 MSRAQ9UJ68 235 aa22.21■■□□□ 1.15
TRIP4-211ENST00000560920 UMODL1Q5DID0 1318 aa22.21■■□□□ 1.15
TRIP4-211ENST00000560920 PATL2C9JE40 543 aaKnown RBP22.2■■□□□ 1.14
TRIP4-211ENST00000560920 APPP05067 770 aa22.2■■□□□ 1.14
TRIP4-211ENST00000560920 FDX1P10109 184 aa22.2■■□□□ 1.14
TRIP4-211ENST00000560920 GNAT2P19087 354 aa22.2■■□□□ 1.14
TRIP4-211ENST00000560920 ITGA7Q13683 1181 aa22.2■■□□□ 1.14
TRIP4-211ENST00000560920 RAB30Q15771 203 aa22.2■■□□□ 1.14
TRIP4-211ENST00000560920 CCDC85BQ15834 202 aaPredicted RBP22.2■■□□□ 1.14
TRIP4-211ENST00000560920 NOL8Q76FK4 1167 aaKnown RBP22.2■■□□□ 1.14
TRIP4-211ENST00000560920 IFNL3Q8IZI9 196 aa22.2■■□□□ 1.14
TRIP4-211ENST00000560920 NKX2-4Q9H2Z4 354 aa22.2■■□□□ 1.14
TRIP4-211ENST00000560920 HIPK3Q9H422 1215 aa22.2■■□□□ 1.14
TRIP4-211ENST00000560920 YBX2Q9Y2T7 364 aaKnown RBP22.2■■□□□ 1.14
TRIP4-211ENST00000560920 DDX49Q9Y6V7 483 aaKnown RBP22.2■■□□□ 1.14
TRIP4-211ENST00000560920 CABYRO75952 493 aa22.19■■□□□ 1.14
TRIP4-211ENST00000560920 COL9A1P20849 921 aa22.19■■□□□ 1.14
TRIP4-211ENST00000560920 FSCN1Q16658 493 aaKnown RBP22.19■■□□□ 1.14
TRIP4-211ENST00000560920 TSHZ3Q63HK5 1081 aa22.19■■□□□ 1.14
TRIP4-211ENST00000560920 TLK2Q86UE8 772 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms