RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 MAPKAPK5Q8IW41 473 aa6.49□□□□□ -1.37
ZEB1-220ENST00000560909 DEFB129Q9H1M3 183 aa6.49□□□□□ -1.37
ZEB1-220ENST00000560909 ALDH8A1Q9H2A2 487 aaPredicted RBP6.49□□□□□ -1.37
ZEB1-220ENST00000560909 FAM217BQ9NTX9 383 aaPredicted RBP6.49□□□□□ -1.37
ZEB1-220ENST00000560909 MCM9Q9NXL9 1143 aa6.49□□□□□ -1.37
ZEB1-220ENST00000560909 PI4KBQ9UBF8 816 aa6.49□□□□□ -1.37
ZEB1-220ENST00000560909 WDR19Q8NEZ3 1342 aa6.49□□□□□ -1.37
ZEB1-220ENST00000560909 AK9Q5TCS8 1911 aa6.48□□□□□ -1.37
ZEB1-220ENST00000560909 TIAM2Q8IVF5 1701 aa6.48□□□□□ -1.37
ZEB1-220ENST00000560909 CLRN2A0PK11 232 aa6.48□□□□□ -1.37
ZEB1-220ENST00000560909 E7EWF7 191 aa6.48□□□□□ -1.37
ZEB1-220ENST00000560909 APPP05067 770 aa6.48□□□□□ -1.37
ZEB1-220ENST00000560909 CYP2D6P10635 497 aa6.48□□□□□ -1.37
ZEB1-220ENST00000560909 ZKSCAN1P17029 563 aaPredicted RBP6.48□□□□□ -1.37
ZEB1-220ENST00000560909 MCCP23508 829 aa6.48□□□□□ -1.37
ZEB1-220ENST00000560909 TDO2P48775 406 aa6.48□□□□□ -1.37
ZEB1-220ENST00000560909 CACNB3P54284 484 aa6.48□□□□□ -1.37
ZEB1-220ENST00000560909 EXOSC10Q01780 885 aaKnown RBP6.48□□□□□ -1.37
ZEB1-220ENST00000560909 AKNAD1Q5T1N1 836 aa6.48□□□□□ -1.37
ZEB1-220ENST00000560909 TBC1D10CQ8IV04 446 aa6.48□□□□□ -1.37
ZEB1-220ENST00000560909 MB21D2Q8IYB1 491 aaPredicted RBP6.48□□□□□ -1.37
ZEB1-220ENST00000560909 GOLGA6L1Q8N7Z2 621 aa6.48□□□□□ -1.37
ZEB1-220ENST00000560909 ANKS1AQ92625 1134 aa6.48□□□□□ -1.37
ZEB1-220ENST00000560909 DDRGK1Q96HY6 314 aa6.48□□□□□ -1.37
ZEB1-220ENST00000560909 AGXT2Q9BYV1 514 aa6.48□□□□□ -1.37
ZEB1-220ENST00000560909 RNF41Q9H4P4 317 aaPredicted RBP6.48□□□□□ -1.37
ZEB1-220ENST00000560909 DNAJC18Q9H819 358 aa6.48□□□□□ -1.37
ZEB1-220ENST00000560909 UPF2Q9HAU5 1272 aaKnown RBP6.48□□□□□ -1.37
ZEB1-220ENST00000560909 TMOD2Q9NZR1 351 aa6.48□□□□□ -1.37
ZEB1-220ENST00000560909 SWAP70Q9UH65 585 aa6.48□□□□□ -1.37
ZEB1-220ENST00000560909 HERC5Q9UII4 1024 aaKnown RBP6.48□□□□□ -1.37
ZEB1-220ENST00000560909 ZNF112Q9UJU3 913 aa6.48□□□□□ -1.37
ZEB1-220ENST00000560909 SCN4AP35499 1836 aa6.48□□□□□ -1.37
ZEB1-220ENST00000560909 DDX60LQ5H9U9 1706 aaKnown RBP6.47□□□□□ -1.37
ZEB1-220ENST00000560909 CYP2D7A0A087X1C5 515 aa6.47□□□□□ -1.37
ZEB1-220ENST00000560909 IGKV6D-41A0A0C4DH26 115 aa6.47□□□□□ -1.37
ZEB1-220ENST00000560909 TCP10L2B9ZVM9 353 aa6.47□□□□□ -1.37
ZEB1-220ENST00000560909 POLR3DP05423 398 aaPredicted RBP6.47□□□□□ -1.37
ZEB1-220ENST00000560909 HMGB1P09429 215 aaKnown RBP6.47□□□□□ -1.37
ZEB1-220ENST00000560909 SPATA31C1P0DKV0 1188 aa6.47□□□□□ -1.37
ZEB1-220ENST00000560909 SHMT1P34896 483 aa6.47□□□□□ -1.37
ZEB1-220ENST00000560909 TNNI2P48788 182 aa6.47□□□□□ -1.37
ZEB1-220ENST00000560909 CDK8P49336 464 aa6.47□□□□□ -1.37
ZEB1-220ENST00000560909 EVCP57679 992 aa6.47□□□□□ -1.37
ZEB1-220ENST00000560909 COL9A3Q14050 684 aaPredicted RBP6.47□□□□□ -1.37
ZEB1-220ENST00000560909 ADCK5Q3MIX3 580 aa6.47□□□□□ -1.37
ZEB1-220ENST00000560909 ANGEL2Q5VTE6 544 aaKnown RBP6.47□□□□□ -1.37
ZEB1-220ENST00000560909 LDHDQ86WU2 507 aa6.47□□□□□ -1.37
ZEB1-220ENST00000560909 TTC14Q96N46 770 aa6.47□□□□□ -1.37
ZEB1-220ENST00000560909 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.47□□□□□ -1.37
ZEB1-220ENST00000560909 TMEM39BQ9GZU3 492 aa6.47□□□□□ -1.37
ZEB1-220ENST00000560909 CNNM2Q9H8M5 875 aa6.47□□□□□ -1.37
ZEB1-220ENST00000560909 GINM1Q9NU53 330 aa6.47□□□□□ -1.37
ZEB1-220ENST00000560909 TCP11L1Q9NUJ3 509 aa6.47□□□□□ -1.37
ZEB1-220ENST00000560909 GGA3Q9NZ52 723 aa6.47□□□□□ -1.37
ZEB1-220ENST00000560909 SERPINB13Q9UIV8 391 aa6.47□□□□□ -1.37
ZEB1-220ENST00000560909 ADAMTSL1Q8N6G6 1762 aa6.46□□□□□ -1.37
ZEB1-220ENST00000560909 PLIN4Q96Q06 1357 aa6.46□□□□□ -1.37
ZEB1-220ENST00000560909 UNCXA6NJT0 531 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 MINDY4BA8MYZ0 360 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 HLA-DOAP06340 250 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 SLC3A2P08195 630 aaKnown RBP6.46□□□□□ -1.38
ZEB1-220ENST00000560909 TAL1P17542 331 aaPredicted RBP6.46□□□□□ -1.38
ZEB1-220ENST00000560909 RASA1P20936 1047 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 PSMA5P28066 241 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 ANTXR2P58335 489 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 HAND2P61296 217 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 CTDSPL2Q05D32 466 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 PDE4BQ07343 736 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 TCP10Q12799 353 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 PICALMQ13492 652 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 RABEP1Q15276 862 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 MAP3K11Q16584 847 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 LCE5AQ5TCM9 118 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 MFSD6Q6ZSS7 791 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 RUFY3Q7L099 469 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 CDC37L1Q7L3B6 337 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 DHX32Q7L7V1 743 aaKnown RBP6.46□□□□□ -1.38
ZEB1-220ENST00000560909 PRICKLE2Q7Z3G6 844 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 AMOTL1Q8IY63 956 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 NCOA7Q8NI08 942 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 IGDCC4Q8TDY8 1250 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 SNX21Q969T3 373 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 HOOK2Q96ED9 719 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 DYNLL2Q96FJ2 89 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 BTBD6Q96KE9 485 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 CCDC17Q96LX7 622 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 NEK1Q96PY6 1258 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 CSRNP1Q96S65 589 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 C1QTNF2Q9BXJ5 285 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 KRT23Q9C075 422 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 VEZTQ9HBM0 779 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 ZNF287Q9HBT7 754 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 NMRK2Q9NPI5 230 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 INCENPQ9NQS7 918 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 ZSWIM5Q9P217 1185 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 SAP30BPQ9UHR5 308 aaKnown RBP6.46□□□□□ -1.38
ZEB1-220ENST00000560909 FOCADQ5VW36 1801 aa6.46□□□□□ -1.38
ZEB1-220ENST00000560909 SSC5DA1L4H1 1573 aa6.45□□□□□ -1.38
ZEB1-220ENST00000560909 RPS6KB1P23443 525 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms