RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 MMS22LQ6ZRQ5 1243 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 EPM2AIP1Q7L775 607 aaPredicted RBP7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 C3orf58Q8NDZ4 430 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 SLC10A4Q96EP9 437 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 EXOC2Q96KP1 924 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 TSPAN18Q96SJ8 248 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 KNDC1Q76NI1 1749 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 POLR3GO15318 223 aaPredicted RBP7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 ADCY3O60266 1144 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 GARTP22102 1010 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 PTPREP23469 700 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 HDGFP51858 240 aaKnown RBP7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 FCGRTP55899 365 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 TNNI3KQ59H18 835 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 NYAP1Q6ZVC0 841 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 GALNT12Q8IXK2 581 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 CCDC24Q8N4L8 307 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 ANKRD20A12PQ8NF67 263 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 NKD1Q969G9 470 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 IFT43Q96FT9 208 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 PRAM1Q96QH2 718 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 FUCA2Q9BTY2 467 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 CD248Q9HCU0 757 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 EVA1BQ9NVM1 165 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 PSD3Q9NYI0 1048 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 ZNF232Q9UNY5 417 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 UBR1Q8IWV7 1749 aa7.67□□□□□ -1.18
TSPAN3-209ENST00000560715 M0R2N6 131 aa7.66□□□□□ -1.18
TSPAN3-209ENST00000560715 NXNQ6DKJ4 435 aa7.66□□□□□ -1.18
TSPAN3-209ENST00000560715 PPP4R3AQ6IN85 833 aa7.66□□□□□ -1.18
TSPAN3-209ENST00000560715 RASSF3Q86WH2 238 aa7.66□□□□□ -1.18
TSPAN3-209ENST00000560715 USP26Q9BXU7 913 aa7.66□□□□□ -1.18
TSPAN3-209ENST00000560715 DDX19BQ9UMR2 479 aa7.66□□□□□ -1.18
TSPAN3-209ENST00000560715 CCDC171Q6TFL3 1326 aa7.66□□□□□ -1.18
TSPAN3-209ENST00000560715 MED14O60244 1454 aa7.66□□□□□ -1.18
TSPAN3-209ENST00000560715 CTC1Q2NKJ3 1217 aa7.66□□□□□ -1.18
TSPAN3-209ENST00000560715 FAM209AQ5JX71 171 aa7.66□□□□□ -1.18
TSPAN3-209ENST00000560715 AGAP9Q5VTM2 703 aa7.66□□□□□ -1.18
TSPAN3-209ENST00000560715 ALDH16A1Q8IZ83 802 aa7.66□□□□□ -1.18
TSPAN3-209ENST00000560715 TTC16Q8NEE8 873 aa7.66□□□□□ -1.18
TSPAN3-209ENST00000560715 NT5C1AQ9BXI3 368 aa7.66□□□□□ -1.18
TSPAN3-209ENST00000560715 FBXO2Q9UK22 296 aaPredicted RBP7.66□□□□□ -1.18
TSPAN3-209ENST00000560715 EXOC6BQ9Y2D4 811 aa7.66□□□□□ -1.18
TSPAN3-209ENST00000560715 ABCC11Q96J66 1382 aa7.66□□□□□ -1.18
TSPAN3-209ENST00000560715 FRMPD2Q68DX3 1309 aaPredicted RBP7.66□□□□□ -1.18
TSPAN3-209ENST00000560715 A0A1W2PRQ8 180 aa7.65□□□□□ -1.18
TSPAN3-209ENST00000560715 ATP8B1O43520 1251 aa7.65□□□□□ -1.18
TSPAN3-209ENST00000560715 CPP00450 1065 aa7.65□□□□□ -1.18
TSPAN3-209ENST00000560715 IVLP07476 585 aa7.65□□□□□ -1.18
TSPAN3-209ENST00000560715 LRMPQ12912 555 aa7.65□□□□□ -1.18
TSPAN3-209ENST00000560715 CAMK2GQ13555 558 aaPredicted RBP7.65□□□□□ -1.18
TSPAN3-209ENST00000560715 FXNQ16595 210 aa7.65□□□□□ -1.18
TSPAN3-209ENST00000560715 ZSCAN25Q6NSZ9 544 aa7.65□□□□□ -1.18
TSPAN3-209ENST00000560715 CCDC186Q7Z3E2 898 aa7.65□□□□□ -1.18
TSPAN3-209ENST00000560715 PHC3Q8NDX5 983 aa7.65□□□□□ -1.18
TSPAN3-209ENST00000560715 UNC93B1Q9H1C4 597 aa7.65□□□□□ -1.18
TSPAN3-209ENST00000560715 NCOA5Q9HCD5 579 aaKnown RBP7.65□□□□□ -1.18
TSPAN3-209ENST00000560715 TNRQ92752 1358 aa7.65□□□□□ -1.18
TSPAN3-209ENST00000560715 KIF20BQ96Q89 1820 aa7.65□□□□□ -1.18
TSPAN3-209ENST00000560715 SEPT2Q15019 361 aa7.65□□□□□ -1.18
TSPAN3-209ENST00000560715 C11orf91Q3C1V1 193 aa7.65□□□□□ -1.18
TSPAN3-209ENST00000560715 LSRQ86X29 649 aaPredicted RBP7.65□□□□□ -1.18
TSPAN3-209ENST00000560715 JMYQ8N9B5 988 aa7.65□□□□□ -1.18
TSPAN3-209ENST00000560715 FLCNQ8NFG4 579 aa7.65□□□□□ -1.18
TSPAN3-209ENST00000560715 EXOC4Q96A65 974 aa7.65□□□□□ -1.18
TSPAN3-209ENST00000560715 TMPRSS4Q9NRS4 437 aa7.65□□□□□ -1.18
TSPAN3-209ENST00000560715 SCHIP1Q9P0W5 487 aaPredicted RBP7.65□□□□□ -1.18
TSPAN3-209ENST00000560715 A0A1W2PP64 1363 aa7.65□□□□□ -1.18
TSPAN3-209ENST00000560715 MYBL2P10244 700 aa7.65□□□□□ -1.19
TSPAN3-209ENST00000560715 ACTN2P35609 894 aa7.65□□□□□ -1.19
TSPAN3-209ENST00000560715 DGKGP49619 791 aa7.65□□□□□ -1.19
TSPAN3-209ENST00000560715 PURAQ00577 322 aaKnown RBP7.65□□□□□ -1.19
TSPAN3-209ENST00000560715 NBPF9Q3BBW0 867 aa7.65□□□□□ -1.19
TSPAN3-209ENST00000560715 NBPF10Q6P3W6 841 aaKnown RBP7.65□□□□□ -1.19
TSPAN3-209ENST00000560715 NBPF11Q86T75 865 aa7.65□□□□□ -1.19
TSPAN3-209ENST00000560715 OR8H2Q8N162 312 aa7.65□□□□□ -1.19
TSPAN3-209ENST00000560715 DHRS4Q9BTZ2 278 aa7.65□□□□□ -1.19
TSPAN3-209ENST00000560715 CRB3Q9BUF7 120 aa7.65□□□□□ -1.19
TSPAN3-209ENST00000560715 OSBPL3Q9H4L5 887 aa7.65□□□□□ -1.19
TSPAN3-209ENST00000560715 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.65□□□□□ -1.19
TSPAN3-209ENST00000560715 PCDHGB6Q9Y5F9 930 aa7.65□□□□□ -1.19
TSPAN3-209ENST00000560715 DGKBQ9Y6T7 804 aa7.65□□□□□ -1.19
TSPAN3-209ENST00000560715 EIF3CLB5ME19 914 aaKnown RBP7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 EREGO14944 169 aa7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 MBD4O95243 580 aa7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 F13A1P00488 732 aa7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 MYCP01106 439 aaPredicted RBP7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 JUNDP17535 347 aa7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 CASP2P42575 452 aa7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 PTPN14Q15678 1187 aa7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 HEATR6Q6AI08 1181 aaKnown RBP7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 CASC1Q6TDU7 716 aa7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 REXO1L1PQ8IX06 675 aa7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 CFAP53Q96M91 514 aa7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 EIF3CQ99613 913 aaKnown RBP7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 NOC4LQ9BVI4 516 aaKnown RBP7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 CD163L1Q9NR16 1453 aa7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 KIF2AO00139 706 aaPredicted RBP7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 NEMP1O14524 444 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms