RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 EFCC1Q9HA90 598 aa14.46□□□□□ -0.1
CSPG4P11-201ENST00000560634 STAM2O75886 525 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 BAG2O95816 211 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 TNNC2P02585 160 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 CDC25BP30305 580 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 IL9RQ01113 521 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 GPIHBP1Q8IV16 184 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 MAP7D3Q8IWC1 876 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 THEGQ9P2T0 379 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 RNF14Q9UBS8 474 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 ZMYM4Q5VZL5 1548 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 hCG_1642624A0A1W2PR95 340 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 RPN1P04843 607 aaKnown RBP14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 POLR2FP61218 127 aaKnown RBP14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 ADAM9Q13443 819 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 TRIM42Q8IWZ5 723 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 IFNL3Q8IZI9 196 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 TDRD7Q8NHU6 1098 aaKnown RBP14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 GLG1Q92896 1179 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 SDCCAG3Q96C92 435 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 PANK4Q9NVE7 773 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 CD2APQ9Y5K6 639 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 TRAPPC8Q9Y2L5 1435 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 EIF3CLB5ME19 914 aaKnown RBP14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 DDAH1O94760 285 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 LIG4P49917 911 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 TCIRG1Q13488 830 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 PDE1CQ14123 709 aaPredicted RBP14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 FBXO18Q8NFZ0 1043 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 EIF3CQ99613 913 aaKnown RBP14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 SPZ1Q9BXG8 430 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 MRPL11Q9Y3B7 192 aaKnown RBP14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 SOS2Q07890 1332 aaPredicted RBP14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 RNF123Q5XPI4 1314 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 SART1O43290 800 aaKnown RBP14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 TRAPPC10P48553 1259 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 EIF4A1P60842 406 aaKnown RBP14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 SF3A3Q12874 501 aaKnown RBP eCLIP14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 ARMC9Q7Z3E5 817 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 KRT26Q7Z3Y9 468 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 CSRNP1Q96S65 589 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 ZNF148Q9UQR1 794 aa14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 COL17A1Q9UMD9 1497 aaPredicted RBP14.45□□□□□ -0.1
CSPG4P11-201ENST00000560634 FOSP01100 380 aaPredicted RBP14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 TECP42680 631 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 LIG3P49916 1009 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 COPB1P53618 953 aaKnown RBP14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 RPS8P62241 208 aaKnown RBP14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 SNCBQ16143 134 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 FAM47AQ5JRC9 791 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 RASIP1Q5U651 963 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 CCDC197Q8NCU1 140 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 INTS9Q9NV88 658 aaKnown RBP14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 RTEL1Q9NZ71 1219 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 ZNF518AQ6AHZ1 1483 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 PTPRKQ15262 1439 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 NEURL1BA8MQ27 555 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 BUB1O43683 1085 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 GPC4O75487 556 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 CLTAP09496 248 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 ATF7P17544 494 aaPredicted RBP14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 LMNB1P20700 586 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 EEF1GP26641 437 aaKnown RBP14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 NXNQ6DKJ4 435 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 PNMA1Q8ND90 353 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 NLRP7Q8WX94 980 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 CCDC68Q9H2F9 335 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 TSPYL2Q9H2G4 693 aaPredicted RBP14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 ASXL2Q76L83 1435 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 ABCC4O15439 1325 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 LAD1O00515 517 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 ADD1P35611 737 aaKnown RBP14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 VPS41P49754 854 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 GUCY2DQ02846 1103 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 PLCB4Q15147 1175 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 LARGE2Q8N3Y3 721 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 IFT122Q9HBG6 1241 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 LGR6Q9HBX8 967 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 TPCN1Q9ULQ1 816 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 RAPGEF6Q8TEU7 1601 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 LRRD1A4D1F6 860 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 GOLGA8CPA6NN73 597 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 IKBKBO14920 756 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 DNAJC8O75937 253 aaPredicted RBP14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 NSFP46459 744 aaKnown RBP14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 PRR16Q569H4 304 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 PPP1R2P3Q6NXS1 205 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 ADPGKQ9BRR6 497 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 GJA3Q9Y6H8 435 aa14.44□□□□□ -0.1
CSPG4P11-201ENST00000560634 KAT6BQ8WYB5 2073 aa14.43□□□□□ -0.1
CSPG4P11-201ENST00000560634 CAPN9O14815 690 aa14.43□□□□□ -0.1
CSPG4P11-201ENST00000560634 GSTA1P08263 222 aa14.43□□□□□ -0.1
CSPG4P11-201ENST00000560634 GSTA2P09210 222 aa14.43□□□□□ -0.1
CSPG4P11-201ENST00000560634 HSPD1P10809 573 aaKnown RBP14.43□□□□□ -0.1
CSPG4P11-201ENST00000560634 PPARDQ03181 441 aa14.43□□□□□ -0.1
CSPG4P11-201ENST00000560634 EXOC3L4Q17RC7 722 aa14.43□□□□□ -0.1
CSPG4P11-201ENST00000560634 SCYL2Q6P3W7 929 aa14.43□□□□□ -0.1
CSPG4P11-201ENST00000560634 BTG4Q9NY30 223 aa14.43□□□□□ -0.1
CSPG4P11-201ENST00000560634 TNKSO95271 1327 aa14.43□□□□□ -0.1
CSPG4P11-201ENST00000560634 RGS12O14924 1447 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms