RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 MFSD5Q6N075 450 aa12.56□□□□□ -0.4
CDC42BPB-207ENST00000560492 ANKRD33Q7Z3H0 272 aa12.56□□□□□ -0.4
CDC42BPB-207ENST00000560492 TOX2Q96NM4 488 aa12.56□□□□□ -0.4
CDC42BPB-207ENST00000560492 RAVER2Q9HCJ3 691 aaKnown RBP12.56□□□□□ -0.4
CDC42BPB-207ENST00000560492 HOMER2Q9NSB8 354 aa12.56□□□□□ -0.4
CDC42BPB-207ENST00000560492 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.56□□□□□ -0.4
CDC42BPB-207ENST00000560492 ARPP21Q9UBL0 812 aaPredicted RBP12.56□□□□□ -0.4
CDC42BPB-207ENST00000560492 ADAMTS5Q9UNA0 930 aa12.56□□□□□ -0.4
CDC42BPB-207ENST00000560492 SYNGAP1Q96PV0 1343 aa12.56□□□□□ -0.4
CDC42BPB-207ENST00000560492 GREB1LQ9C091 1923 aaPredicted RBP12.55□□□□□ -0.4
CDC42BPB-207ENST00000560492 A0A0U1RQG5 324 aaPredicted RBP12.55□□□□□ -0.4
CDC42BPB-207ENST00000560492 SNAI1O95863 264 aaPredicted RBP12.55□□□□□ -0.4
CDC42BPB-207ENST00000560492 CHGBP05060 677 aa12.55□□□□□ -0.4
CDC42BPB-207ENST00000560492 CSF2RAP15509 400 aa12.55□□□□□ -0.4
CDC42BPB-207ENST00000560492 PBX2P40425 430 aa12.55□□□□□ -0.4
CDC42BPB-207ENST00000560492 IRX5P78411 483 aaPredicted RBP12.55□□□□□ -0.4
CDC42BPB-207ENST00000560492 IKQ13123 557 aaPredicted RBP12.55□□□□□ -0.4
CDC42BPB-207ENST00000560492 ACVR2BQ13705 512 aa12.55□□□□□ -0.4
CDC42BPB-207ENST00000560492 CTR9Q6PD62 1173 aa12.55□□□□□ -0.4
CDC42BPB-207ENST00000560492 MICALL1Q8N3F8 863 aa12.55□□□□□ -0.4
CDC42BPB-207ENST00000560492 MSL3Q8N5Y2 521 aaKnown RBP12.55□□□□□ -0.4
CDC42BPB-207ENST00000560492 PRPF38AQ8NAV1 312 aaKnown RBP12.55□□□□□ -0.4
CDC42BPB-207ENST00000560492 MTIF3Q9H2K0 278 aaKnown RBP12.55□□□□□ -0.4
CDC42BPB-207ENST00000560492 THEGQ9P2T0 379 aa12.55□□□□□ -0.4
CDC42BPB-207ENST00000560492 MSRAQ9UJ68 235 aa12.55□□□□□ -0.4
CDC42BPB-207ENST00000560492 ZBED9Q6R2W3 1325 aa12.55□□□□□ -0.4
CDC42BPB-207ENST00000560492 TTLL13PA6NNM8 815 aa12.54□□□□□ -0.4
CDC42BPB-207ENST00000560492 F5H6K3 240 aa12.54□□□□□ -0.4
CDC42BPB-207ENST00000560492 RAB11FIP3O75154 756 aa12.54□□□□□ -0.4
CDC42BPB-207ENST00000560492 NDUFB10O96000 172 aa12.54□□□□□ -0.4
CDC42BPB-207ENST00000560492 MS4A1P11836 297 aa12.54□□□□□ -0.4
CDC42BPB-207ENST00000560492 ATP5JP18859 108 aa12.54□□□□□ -0.4
CDC42BPB-207ENST00000560492 COL9A1P20849 921 aa12.54□□□□□ -0.4
CDC42BPB-207ENST00000560492 KLRC3Q07444 240 aa12.54□□□□□ -0.4
CDC42BPB-207ENST00000560492 CCDC144BQ3MJ40 725 aa12.54□□□□□ -0.4
CDC42BPB-207ENST00000560492 TMEM240Q5SV17 173 aa12.54□□□□□ -0.4
CDC42BPB-207ENST00000560492 PSRC1Q6PGN9 363 aaPredicted RBP12.54□□□□□ -0.4
CDC42BPB-207ENST00000560492 ZNF365Q70YC5 407 aa12.54□□□□□ -0.4
CDC42BPB-207ENST00000560492 RPAP2Q8IXW5 612 aaPredicted RBP12.54□□□□□ -0.4
CDC42BPB-207ENST00000560492 KLHDC9Q8NEP7 349 aa12.54□□□□□ -0.4
CDC42BPB-207ENST00000560492 REPS2Q8NFH8 660 aa12.54□□□□□ -0.4
CDC42BPB-207ENST00000560492 CHMP4CQ96CF2 233 aa12.54□□□□□ -0.4
CDC42BPB-207ENST00000560492 HAUS7Q99871 368 aa12.54□□□□□ -0.4
CDC42BPB-207ENST00000560492 PBX4Q9BYU1 374 aa12.54□□□□□ -0.4
CDC42BPB-207ENST00000560492 ABHD16BQ9H3Z7 469 aa12.54□□□□□ -0.4
CDC42BPB-207ENST00000560492 CLIP2Q9UDT6 1046 aa12.54□□□□□ -0.4
CDC42BPB-207ENST00000560492 TBX21Q9UL17 535 aa12.54□□□□□ -0.4
CDC42BPB-207ENST00000560492 RIPK3Q9Y572 518 aa12.54□□□□□ -0.4
CDC42BPB-207ENST00000560492 ELP1O95163 1332 aa12.54□□□□□ -0.4
CDC42BPB-207ENST00000560492 POTEMA6NI47 508 aa12.53□□□□□ -0.4
CDC42BPB-207ENST00000560492 ARVCFO00192 962 aa12.53□□□□□ -0.4
CDC42BPB-207ENST00000560492 APPP05067 770 aa12.53□□□□□ -0.4
CDC42BPB-207ENST00000560492 CYP2C18P33260 490 aa12.53□□□□□ -0.4
CDC42BPB-207ENST00000560492 TDO2P48775 406 aa12.53□□□□□ -0.4
CDC42BPB-207ENST00000560492 BEX3Q00994 111 aa12.53□□□□□ -0.4
CDC42BPB-207ENST00000560492 UBE3CQ15386 1083 aa12.53□□□□□ -0.4
CDC42BPB-207ENST00000560492 RAB30Q15771 203 aa12.53□□□□□ -0.4
CDC42BPB-207ENST00000560492 ARMCX2Q7L311 632 aa12.53□□□□□ -0.4
CDC42BPB-207ENST00000560492 ZNF444Q8N0Y2 327 aaPredicted RBP12.53□□□□□ -0.4
CDC42BPB-207ENST00000560492 PUS7LQ9H0K6 701 aaKnown RBP12.53□□□□□ -0.4
CDC42BPB-207ENST00000560492 SLC28A3Q9HAS3 691 aa12.53□□□□□ -0.4
CDC42BPB-207ENST00000560492 FBXO40Q9UH90 709 aa12.53□□□□□ -0.4
CDC42BPB-207ENST00000560492 PCDHB13Q9Y5F0 798 aa12.53□□□□□ -0.4
CDC42BPB-207ENST00000560492 TCF20Q9UGU0 1960 aaKnown RBP12.52□□□□□ -0.4
CDC42BPB-207ENST00000560492 RASA1P20936 1047 aa12.52□□□□□ -0.41
CDC42BPB-207ENST00000560492 MAMDC4Q6UXC1 1216 aa12.52□□□□□ -0.41
CDC42BPB-207ENST00000560492 ZNF467Q7Z7K2 595 aaPredicted RBP12.52□□□□□ -0.41
CDC42BPB-207ENST00000560492 CCDC144CPQ8IYA2 1237 aa12.52□□□□□ -0.41
CDC42BPB-207ENST00000560492 LRRC47Q8N1G4 583 aaKnown RBP12.52□□□□□ -0.41
CDC42BPB-207ENST00000560492 NKX2-4Q9H2Z4 354 aa12.52□□□□□ -0.41
CDC42BPB-207ENST00000560492 NYAP2Q9P242 653 aa12.52□□□□□ -0.41
CDC42BPB-207ENST00000560492 DDX19BQ9UMR2 479 aa12.52□□□□□ -0.41
CDC42BPB-207ENST00000560492 COG6Q9Y2V7 657 aa12.52□□□□□ -0.41
CDC42BPB-207ENST00000560492 DNAJC25-GNG10A0A024R161 153 aa12.51□□□□□ -0.41
CDC42BPB-207ENST00000560492 ZBBXA8MT70 800 aa12.51□□□□□ -0.41
CDC42BPB-207ENST00000560492 ADCY6O43306 1168 aa12.51□□□□□ -0.41
CDC42BPB-207ENST00000560492 PRDM1O75626 825 aa12.51□□□□□ -0.41
CDC42BPB-207ENST00000560492 FGBP02675 491 aa12.51□□□□□ -0.41
CDC42BPB-207ENST00000560492 CST5P28325 142 aaPredicted RBP12.51□□□□□ -0.41
CDC42BPB-207ENST00000560492 GJA9P57773 515 aa12.51□□□□□ -0.41
CDC42BPB-207ENST00000560492 TNFAIP2Q03169 654 aa12.51□□□□□ -0.41
CDC42BPB-207ENST00000560492 SKIV2LQ15477 1246 aaKnown RBP12.51□□□□□ -0.41
CDC42BPB-207ENST00000560492 CXCL17Q6UXB2 119 aa12.51□□□□□ -0.41
CDC42BPB-207ENST00000560492 OTOP2Q7RTS6 562 aa12.51□□□□□ -0.41
CDC42BPB-207ENST00000560492 FAM126BQ8IXS8 530 aa12.51□□□□□ -0.41
CDC42BPB-207ENST00000560492 CHST13Q8NET6 341 aa12.51□□□□□ -0.41
CDC42BPB-207ENST00000560492 ADAMTS19Q8TE59 1207 aa12.51□□□□□ -0.41
CDC42BPB-207ENST00000560492 ATXN2LQ8WWM7 1075 aaKnown RBP12.51□□□□□ -0.41
CDC42BPB-207ENST00000560492 FAM212AQ96EL1 285 aa12.51□□□□□ -0.41
CDC42BPB-207ENST00000560492 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.51□□□□□ -0.41
CDC42BPB-207ENST00000560492 AP5M1Q9H0R1 490 aa12.51□□□□□ -0.41
CDC42BPB-207ENST00000560492 HIPK3Q9H422 1215 aa12.51□□□□□ -0.41
CDC42BPB-207ENST00000560492 ZNF287Q9HBT7 754 aa12.51□□□□□ -0.41
CDC42BPB-207ENST00000560492 IL23AQ9NPF7 189 aa12.51□□□□□ -0.41
CDC42BPB-207ENST00000560492 FEM1BQ9UK73 627 aa12.51□□□□□ -0.41
CDC42BPB-207ENST00000560492 SPTBN5Q9NRC6 3674 aaKnown RBP12.5□□□□□ -0.41
CDC42BPB-207ENST00000560492 SMARCA5O60264 1052 aaPredicted RBP12.5□□□□□ -0.41
CDC42BPB-207ENST00000560492 ZEB2O60315 1214 aa12.5□□□□□ -0.41
CDC42BPB-207ENST00000560492 CDK7P50613 346 aa12.5□□□□□ -0.41
CDC42BPB-207ENST00000560492 CCL23P55773 120 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms