RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 NCAPG2Q86XI2 1143 aa16.28■□□□□ 0.2
PKNOX1-209ENST00000560448 AGXT2Q9BYV1 514 aa16.28■□□□□ 0.2
PKNOX1-209ENST00000560448 ZSWIM6Q9HCJ5 1215 aa16.28■□□□□ 0.2
PKNOX1-209ENST00000560448 GPCPD1Q9NPB8 672 aa16.28■□□□□ 0.2
PKNOX1-209ENST00000560448 GJD2Q9UKL4 321 aa16.28■□□□□ 0.2
PKNOX1-209ENST00000560448 CYP46A1Q9Y6A2 500 aa16.28■□□□□ 0.2
PKNOX1-209ENST00000560448 KLRF2D3W0D1 207 aa16.28■□□□□ 0.2
PKNOX1-209ENST00000560448 CASTP20810 708 aaKnown RBP16.28■□□□□ 0.2
PKNOX1-209ENST00000560448 CAP1Q01518 475 aa16.28■□□□□ 0.2
PKNOX1-209ENST00000560448 MAP2K5Q13163 448 aa16.28■□□□□ 0.2
PKNOX1-209ENST00000560448 KCTD2Q14681 263 aa16.28■□□□□ 0.2
PKNOX1-209ENST00000560448 SLC9C1Q4G0N8 1177 aa16.28■□□□□ 0.2
PKNOX1-209ENST00000560448 WDR78Q5VTH9 848 aa16.28■□□□□ 0.2
PKNOX1-209ENST00000560448 ARMC5Q96C12 935 aa16.28■□□□□ 0.2
PKNOX1-209ENST00000560448 APBA2Q99767 749 aa16.28■□□□□ 0.2
PKNOX1-209ENST00000560448 UPF2Q9HAU5 1272 aaKnown RBP16.28■□□□□ 0.2
PKNOX1-209ENST00000560448 RBM28Q9NW13 759 aaKnown RBP16.28■□□□□ 0.2
PKNOX1-209ENST00000560448 MAD2L2Q9UI95 211 aa16.28■□□□□ 0.2
PKNOX1-209ENST00000560448 CAPN2P17655 700 aa16.27■□□□□ 0.19
PKNOX1-209ENST00000560448 TTBK2Q6IQ55 1244 aa16.27■□□□□ 0.19
PKNOX1-209ENST00000560448 CPXCR1Q8N123 301 aa16.27■□□□□ 0.19
PKNOX1-209ENST00000560448 USP6NLQ92738 828 aa16.27■□□□□ 0.19
PKNOX1-209ENST00000560448 ACAD9Q9H845 621 aa16.27■□□□□ 0.19
PKNOX1-209ENST00000560448 RAVER2Q9HCJ3 691 aaKnown RBP16.27■□□□□ 0.19
PKNOX1-209ENST00000560448 HPS5Q9UPZ3 1129 aa16.27■□□□□ 0.19
PKNOX1-209ENST00000560448 DIS3Q9Y2L1 958 aaKnown RBP16.27■□□□□ 0.19
PKNOX1-209ENST00000560448 PTCH2Q9Y6C5 1203 aa16.27■□□□□ 0.19
PKNOX1-209ENST00000560448 ZSWIM8A7E2V4 1837 aa16.26■□□□□ 0.19
PKNOX1-209ENST00000560448 ZNF536O15090 1300 aa16.26■□□□□ 0.19
PKNOX1-209ENST00000560448 CCDC196A0A1B0GTZ2 297 aa16.26■□□□□ 0.19
PKNOX1-209ENST00000560448 GOLGA8HP0CJ92 632 aa16.26■□□□□ 0.19
PKNOX1-209ENST00000560448 GRK4P32298 578 aa16.26■□□□□ 0.19
PKNOX1-209ENST00000560448 SLC16A2P36021 539 aa16.26■□□□□ 0.19
PKNOX1-209ENST00000560448 APOA5Q6Q788 366 aa16.26■□□□□ 0.19
PKNOX1-209ENST00000560448 RASGRP2Q7LDG7 609 aa16.26■□□□□ 0.19
PKNOX1-209ENST00000560448 NUP133Q8WUM0 1156 aa16.26■□□□□ 0.19
PKNOX1-209ENST00000560448 SPZ1Q9BXG8 430 aa16.26■□□□□ 0.19
PKNOX1-209ENST00000560448 RIOX1Q9H6W3 641 aa16.26■□□□□ 0.19
PKNOX1-209ENST00000560448 CCPG1Q9ULG6 757 aa16.26■□□□□ 0.19
PKNOX1-209ENST00000560448 PFASO15067 1338 aa16.26■□□□□ 0.19
PKNOX1-209ENST00000560448 DOCK3Q8IZD9 2030 aa16.25■□□□□ 0.19
PKNOX1-209ENST00000560448 PLXNB2O15031 1838 aa16.25■□□□□ 0.19
PKNOX1-209ENST00000560448 ZBTB43O43298 467 aa16.25■□□□□ 0.19
PKNOX1-209ENST00000560448 PEX10O60683 326 aa16.25■□□□□ 0.19
PKNOX1-209ENST00000560448 ADORA2AP29274 412 aa16.25■□□□□ 0.19
PKNOX1-209ENST00000560448 EVCP57679 992 aa16.25■□□□□ 0.19
PKNOX1-209ENST00000560448 UBXN2AP68543 259 aa16.25■□□□□ 0.19
PKNOX1-209ENST00000560448 DPP9Q86TI2 863 aa16.25■□□□□ 0.19
PKNOX1-209ENST00000560448 ADGRF4Q8IZF3 695 aa16.25■□□□□ 0.19
PKNOX1-209ENST00000560448 SAMD3Q8N6K7 520 aa16.25■□□□□ 0.19
PKNOX1-209ENST00000560448 FANCBQ8NB91 859 aa16.25■□□□□ 0.19
PKNOX1-209ENST00000560448 MTMR8Q96EF0 704 aa16.25■□□□□ 0.19
PKNOX1-209ENST00000560448 ABHD8Q96I13 439 aa16.25■□□□□ 0.19
PKNOX1-209ENST00000560448 MMP19Q99542 508 aa16.25■□□□□ 0.19
PKNOX1-209ENST00000560448 SENP2Q9HC62 589 aa16.25■□□□□ 0.19
PKNOX1-209ENST00000560448 GABRQQ9UN88 632 aa16.25■□□□□ 0.19
PKNOX1-209ENST00000560448 ZBTB5O15062 677 aa16.24■□□□□ 0.19
PKNOX1-209ENST00000560448 DHX16O60231 1041 aaKnown RBP16.24■□□□□ 0.19
PKNOX1-209ENST00000560448 ADCY3O60266 1144 aa16.24■□□□□ 0.19
PKNOX1-209ENST00000560448 HMGCRP04035 888 aa16.24■□□□□ 0.19
PKNOX1-209ENST00000560448 ANKRD1Q15327 319 aa16.24■□□□□ 0.19
PKNOX1-209ENST00000560448 CDC37Q16543 378 aaPredicted RBP16.24■□□□□ 0.19
PKNOX1-209ENST00000560448 OLFML2BQ68BL8 750 aa16.24■□□□□ 0.19
PKNOX1-209ENST00000560448 STAG2Q8N3U4 1231 aa16.24■□□□□ 0.19
PKNOX1-209ENST00000560448 MSL3Q8N5Y2 521 aaKnown RBP16.24■□□□□ 0.19
PKNOX1-209ENST00000560448 UBA5Q9GZZ9 404 aa16.24■□□□□ 0.19
PKNOX1-209ENST00000560448 ALDH8A1Q9H2A2 487 aaPredicted RBP16.24■□□□□ 0.19
PKNOX1-209ENST00000560448 NID2Q14112 1375 aa16.24■□□□□ 0.19
PKNOX1-209ENST00000560448 LOC102724159A0A0B4J2E5 919 aa16.23■□□□□ 0.19
PKNOX1-209ENST00000560448 CAPN15O75808 1086 aa16.23■□□□□ 0.19
PKNOX1-209ENST00000560448 PWP2Q15269 919 aaKnown RBP16.23■□□□□ 0.19
PKNOX1-209ENST00000560448 CCDC174Q6PII3 467 aa16.23■□□□□ 0.19
PKNOX1-209ENST00000560448 Q6ZUG5 572 aa16.23■□□□□ 0.19
PKNOX1-209ENST00000560448 ZNF467Q7Z7K2 595 aaPredicted RBP16.23■□□□□ 0.19
PKNOX1-209ENST00000560448 MICU3Q86XE3 530 aa16.23■□□□□ 0.19
PKNOX1-209ENST00000560448 RGS22Q8NE09 1264 aa16.23■□□□□ 0.19
PKNOX1-209ENST00000560448 DDX11Q96FC9 970 aa16.23■□□□□ 0.19
PKNOX1-209ENST00000560448 AGBL1Q96MI9 1066 aa16.23■□□□□ 0.19
PKNOX1-209ENST00000560448 TRERF1Q96PN7 1200 aa16.23■□□□□ 0.19
PKNOX1-209ENST00000560448 AMNQ9BXJ7 453 aa16.23■□□□□ 0.19
PKNOX1-209ENST00000560448 LRRC2Q9BYS8 371 aa16.23■□□□□ 0.19
PKNOX1-209ENST00000560448 JMJD4Q9H9V9 463 aa16.23■□□□□ 0.19
PKNOX1-209ENST00000560448 RNF146Q9NTX7 359 aa16.23■□□□□ 0.19
PKNOX1-209ENST00000560448 MAP3K20Q9NYL2 800 aaKnown RBP16.23■□□□□ 0.19
PKNOX1-209ENST00000560448 RIPK3Q9Y572 518 aa16.23■□□□□ 0.19
PKNOX1-209ENST00000560448 ABCB11O95342 1321 aa16.23■□□□□ 0.19
PKNOX1-209ENST00000560448 KLF18A0A0U1RQI7 1052 aa16.22■□□□□ 0.19
PKNOX1-209ENST00000560448 ALAS1P13196 640 aa16.22■□□□□ 0.19
PKNOX1-209ENST00000560448 CYP2B6P20813 491 aa16.22■□□□□ 0.19
PKNOX1-209ENST00000560448 TEX2Q8IWB9 1127 aa16.22■□□□□ 0.19
PKNOX1-209ENST00000560448 ANKRD35Q8N283 1001 aa16.22■□□□□ 0.19
PKNOX1-209ENST00000560448 BRF1Q92994 677 aa16.22■□□□□ 0.19
PKNOX1-209ENST00000560448 CHMP4CQ96CF2 233 aa16.22■□□□□ 0.19
PKNOX1-209ENST00000560448 ZNF333Q96JL9 665 aa16.22■□□□□ 0.19
PKNOX1-209ENST00000560448 C22orf23Q9BZE7 217 aa16.22■□□□□ 0.19
PKNOX1-209ENST00000560448 GPHNQ9NQX3 736 aaPredicted RBP16.22■□□□□ 0.19
PKNOX1-209ENST00000560448 RBM27Q9P2N5 1060 aaKnown RBP16.22■□□□□ 0.19
PKNOX1-209ENST00000560448 SEC63Q9UGP8 760 aaKnown RBP16.22■□□□□ 0.19
PKNOX1-209ENST00000560448 PNMA6FA0A0J9YX94 578 aa16.21■□□□□ 0.19
PKNOX1-209ENST00000560448 ECM2O94769 699 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms