RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 ABHD16BQ9H3Z7 469 aa16.59■□□□□ 0.25
TPM1-223ENST00000560445 ASB14A6NK59 587 aa16.58■□□□□ 0.24
TPM1-223ENST00000560445 POTEB2H3BUK9 544 aa16.58■□□□□ 0.24
TPM1-223ENST00000560445 MAGEA10P43363 369 aaPredicted RBP16.58■□□□□ 0.24
TPM1-223ENST00000560445 LRRC41Q15345 812 aa16.58■□□□□ 0.24
TPM1-223ENST00000560445 C1orf53Q5VUE5 145 aa16.58■□□□□ 0.24
TPM1-223ENST00000560445 GPR153Q6NV75 609 aa16.58■□□□□ 0.24
TPM1-223ENST00000560445 NUP133Q8WUM0 1156 aa16.58■□□□□ 0.24
TPM1-223ENST00000560445 MPHOSPH6Q99547 160 aaKnown RBP16.58■□□□□ 0.24
TPM1-223ENST00000560445 TSEN34Q9BSV6 310 aaKnown RBP16.58■□□□□ 0.24
TPM1-223ENST00000560445 RNF146Q9NTX7 359 aa16.58■□□□□ 0.24
TPM1-223ENST00000560445 ZHX1Q9UKY1 873 aaPredicted RBP16.58■□□□□ 0.24
TPM1-223ENST00000560445 MOXD2PA6NHM9 499 aa16.57■□□□□ 0.24
TPM1-223ENST00000560445 RTP1P59025 263 aa16.57■□□□□ 0.24
TPM1-223ENST00000560445 PRAMEF19Q5SWL8 479 aa16.57■□□□□ 0.24
TPM1-223ENST00000560445 TDHQ8IZJ6 230 aa16.57■□□□□ 0.24
TPM1-223ENST00000560445 IL17RBQ9NRM6 502 aa16.57■□□□□ 0.24
TPM1-223ENST00000560445 PHF24Q9UPV7 400 aa16.57■□□□□ 0.24
TPM1-223ENST00000560445 RIPK3Q9Y572 518 aa16.57■□□□□ 0.24
TPM1-223ENST00000560445 LAMA4Q16363 1823 aa16.56■□□□□ 0.24
TPM1-223ENST00000560445 RAD50Q92878 1312 aa16.56■□□□□ 0.24
TPM1-223ENST00000560445 LOC102724159A0A0B4J2E5 919 aa16.56■□□□□ 0.24
TPM1-223ENST00000560445 DUSP11O75319 330 aaKnown RBP16.56■□□□□ 0.24
TPM1-223ENST00000560445 IGHDP01880 384 aa16.56■□□□□ 0.24
TPM1-223ENST00000560445 ZNF865P0CJ78 1059 aaPredicted RBP16.56■□□□□ 0.24
TPM1-223ENST00000560445 SYN1P17600 705 aa16.56■□□□□ 0.24
TPM1-223ENST00000560445 ATN1P54259 1190 aaPredicted RBP16.56■□□□□ 0.24
TPM1-223ENST00000560445 PWP2Q15269 919 aaKnown RBP16.56■□□□□ 0.24
TPM1-223ENST00000560445 IMMTQ16891 758 aaKnown RBP16.56■□□□□ 0.24
TPM1-223ENST00000560445 GPATCH4Q5T3I0 446 aaKnown RBP16.56■□□□□ 0.24
TPM1-223ENST00000560445 CWC27Q6UX04 472 aaKnown RBP16.56■□□□□ 0.24
TPM1-223ENST00000560445 SLC39A5Q6ZMH5 540 aa16.56■□□□□ 0.24
TPM1-223ENST00000560445 KCTD1Q719H9 257 aa16.56■□□□□ 0.24
TPM1-223ENST00000560445 ZNF589Q86UQ0 364 aaPredicted RBP16.56■□□□□ 0.24
TPM1-223ENST00000560445 PCSK9Q8NBP7 692 aaKnown RBP16.56■□□□□ 0.24
TPM1-223ENST00000560445 RUFY2Q8WXA3 655 aa16.56■□□□□ 0.24
TPM1-223ENST00000560445 DSCC1Q9BVC3 393 aa16.56■□□□□ 0.24
TPM1-223ENST00000560445 CNNM2Q9H8M5 875 aa16.56■□□□□ 0.24
TPM1-223ENST00000560445 HOMER2Q9NSB8 354 aa16.56■□□□□ 0.24
TPM1-223ENST00000560445 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.56■□□□□ 0.24
TPM1-223ENST00000560445 CCPG1Q9ULG6 757 aa16.56■□□□□ 0.24
TPM1-223ENST00000560445 PRR12Q9ULL5 1215 aa16.56■□□□□ 0.24
TPM1-223ENST00000560445 ATP11BQ9Y2G3 1177 aa16.56■□□□□ 0.24
TPM1-223ENST00000560445 ICAM1P05362 532 aa16.55■□□□□ 0.24
TPM1-223ENST00000560445 ALAS1P13196 640 aa16.55■□□□□ 0.24
TPM1-223ENST00000560445 ADCYAP1R1P41586 468 aa16.55■□□□□ 0.24
TPM1-223ENST00000560445 ACVR2BQ13705 512 aa16.55■□□□□ 0.24
TPM1-223ENST00000560445 SNX17Q15036 470 aa16.55■□□□□ 0.24
TPM1-223ENST00000560445 LRIT3Q3SXY7 679 aa16.55■□□□□ 0.24
TPM1-223ENST00000560445 SYDE2Q5VT97 1194 aa16.55■□□□□ 0.24
TPM1-223ENST00000560445 ANO1Q5XXA6 986 aa16.55■□□□□ 0.24
TPM1-223ENST00000560445 BTNL9Q6UXG8 535 aa16.55■□□□□ 0.24
TPM1-223ENST00000560445 DGKHQ86XP1 1220 aa16.55■□□□□ 0.24
TPM1-223ENST00000560445 TRERF1Q96PN7 1200 aa16.55■□□□□ 0.24
TPM1-223ENST00000560445 KRT23Q9C075 422 aa16.55■□□□□ 0.24
TPM1-223ENST00000560445 ADD3Q9UEY8 706 aaKnown RBP16.55■□□□□ 0.24
TPM1-223ENST00000560445 RANBP2P49792 3224 aaKnown RBP16.54■□□□□ 0.24
TPM1-223ENST00000560445 MROH7Q68CQ1 1323 aa16.54■□□□□ 0.24
TPM1-223ENST00000560445 B4DLN1 442 aa16.54■□□□□ 0.24
TPM1-223ENST00000560445 NMT2O60551 498 aa16.54■□□□□ 0.24
TPM1-223ENST00000560445 MRPL12P52815 198 aaKnown RBP16.54■□□□□ 0.24
TPM1-223ENST00000560445 HAND2P61296 217 aa16.54■□□□□ 0.24
TPM1-223ENST00000560445 CCDC174Q6PII3 467 aa16.54■□□□□ 0.24
TPM1-223ENST00000560445 ARMCX2Q7L311 632 aa16.54■□□□□ 0.24
TPM1-223ENST00000560445 TMEM47Q9BQJ4 181 aa16.54■□□□□ 0.24
TPM1-223ENST00000560445 MAF1Q9H063 256 aa16.54■□□□□ 0.24
TPM1-223ENST00000560445 RANBP17Q9H2T7 1088 aaKnown RBP16.54■□□□□ 0.24
TPM1-223ENST00000560445 MTMR7Q9Y216 660 aa16.54■□□□□ 0.24
TPM1-223ENST00000560445 PGK1P00558 417 aa16.53■□□□□ 0.24
TPM1-223ENST00000560445 CST5P28325 142 aaPredicted RBP16.53■□□□□ 0.24
TPM1-223ENST00000560445 FAM133AQ8N9E0 248 aa16.53■□□□□ 0.24
TPM1-223ENST00000560445 AGBL1Q96MI9 1066 aa16.53■□□□□ 0.24
TPM1-223ENST00000560445 GLT1D1Q96MS3 346 aa16.53■□□□□ 0.24
TPM1-223ENST00000560445 KAT14Q9H8E8 782 aa16.53■□□□□ 0.24
TPM1-223ENST00000560445 A1CFQ9NQ94 594 aaKnown RBP16.53■□□□□ 0.24
TPM1-223ENST00000560445 TACC3Q9Y6A5 838 aa16.53■□□□□ 0.24
TPM1-223ENST00000560445 ZNF536O15090 1300 aa16.52■□□□□ 0.24
TPM1-223ENST00000560445 WDR19Q8NEZ3 1342 aa16.52■□□□□ 0.24
TPM1-223ENST00000560445 SYNRGQ9UMZ2 1314 aa16.52■□□□□ 0.24
TPM1-223ENST00000560445 SMCHD1A6NHR9 2005 aa16.52■□□□□ 0.24
TPM1-223ENST00000560445 ZEB2O60315 1214 aa16.52■□□□□ 0.24
TPM1-223ENST00000560445 SNAI1O95863 264 aaPredicted RBP16.52■□□□□ 0.24
TPM1-223ENST00000560445 PDHBP11177 359 aa16.52■□□□□ 0.24
TPM1-223ENST00000560445 TRDNQ13061 729 aa16.52■□□□□ 0.24
TPM1-223ENST00000560445 CCDC144CPQ8IYA2 1237 aa16.52■□□□□ 0.24
TPM1-223ENST00000560445 UBAC1Q9BSL1 405 aa16.52■□□□□ 0.24
TPM1-223ENST00000560445 SEZ6LQ9BYH1 1024 aa16.52■□□□□ 0.24
TPM1-223ENST00000560445 INCENPQ9NQS7 918 aa16.52■□□□□ 0.24
TPM1-223ENST00000560445 PRDM5Q9NQX1 630 aaPredicted RBP16.52■□□□□ 0.24
TPM1-223ENST00000560445 STARD7Q9NQZ5 370 aa16.52■□□□□ 0.24
TPM1-223ENST00000560445 ELP1O95163 1332 aa16.51■□□□□ 0.23
TPM1-223ENST00000560445 A0A1W2PQ45 241 aaPredicted RBP16.51■□□□□ 0.23
TPM1-223ENST00000560445 A0A1W2PQY0 241 aa16.51■□□□□ 0.23
TPM1-223ENST00000560445 DCDC2CA8MYV0 355 aa16.51■□□□□ 0.23
TPM1-223ENST00000560445 ADAMTS4O75173 837 aa16.51■□□□□ 0.23
TPM1-223ENST00000560445 C6orf222P0C671 652 aaPredicted RBP16.51■□□□□ 0.23
TPM1-223ENST00000560445 TAL1P17542 331 aaPredicted RBP16.51■□□□□ 0.23
TPM1-223ENST00000560445 ACLYP53396 1101 aa16.51■□□□□ 0.23
TPM1-223ENST00000560445 ZNF543Q08ER8 600 aa16.51■□□□□ 0.23
TPM1-223ENST00000560445 CCDC144BQ3MJ40 725 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms