RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 TLE2Q04725 743 aa16.06■□□□□ 0.16
SMAD3-214ENST00000560402 TKFCQ3LXA3 575 aa16.06■□□□□ 0.16
SMAD3-214ENST00000560402 OTUD7AQ8TE49 926 aaPredicted RBP16.06■□□□□ 0.16
SMAD3-214ENST00000560402 ACAD9Q9H845 621 aa16.06■□□□□ 0.16
SMAD3-214ENST00000560402 SPC25Q9HBM1 224 aa16.06■□□□□ 0.16
SMAD3-214ENST00000560402 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.06■□□□□ 0.16
SMAD3-214ENST00000560402 TMEM232C9JQI7 657 aa16.05■□□□□ 0.16
SMAD3-214ENST00000560402 POTEB2H3BUK9 544 aa16.05■□□□□ 0.16
SMAD3-214ENST00000560402 KIAA0355O15063 1070 aa16.05■□□□□ 0.16
SMAD3-214ENST00000560402 IKQ13123 557 aaPredicted RBP16.05■□□□□ 0.16
SMAD3-214ENST00000560402 HDAC1Q13547 482 aaPredicted RBP16.05■□□□□ 0.16
SMAD3-214ENST00000560402 ACVR2BQ13705 512 aa16.05■□□□□ 0.16
SMAD3-214ENST00000560402 ZNF697Q5TEC3 545 aa16.05■□□□□ 0.16
SMAD3-214ENST00000560402 KLHDC9Q8NEP7 349 aa16.05■□□□□ 0.16
SMAD3-214ENST00000560402 BADQ92934 168 aa16.05■□□□□ 0.16
SMAD3-214ENST00000560402 LENG1Q96BZ8 264 aaPredicted RBP16.05■□□□□ 0.16
SMAD3-214ENST00000560402 EVI5LQ96CN4 794 aa16.05■□□□□ 0.16
SMAD3-214ENST00000560402 TOX2Q96NM4 488 aa16.05■□□□□ 0.16
SMAD3-214ENST00000560402 STARD7Q9NQZ5 370 aa16.05■□□□□ 0.16
SMAD3-214ENST00000560402 ANAPC4Q9UJX5 808 aa16.05■□□□□ 0.16
SMAD3-214ENST00000560402 ISY1Q9ULR0 285 aaKnown RBP16.05■□□□□ 0.16
SMAD3-214ENST00000560402 ELP1O95163 1332 aa16.04■□□□□ 0.16
SMAD3-214ENST00000560402 ZMYM6O95789 1325 aa16.04■□□□□ 0.16
SMAD3-214ENST00000560402 LAMA4Q16363 1823 aa16.04■□□□□ 0.16
SMAD3-214ENST00000560402 TRIM43BA6NCK2 446 aa16.04■□□□□ 0.16
SMAD3-214ENST00000560402 SLC4A3P48751 1232 aa16.04■□□□□ 0.16
SMAD3-214ENST00000560402 ACLYP53396 1101 aa16.04■□□□□ 0.16
SMAD3-214ENST00000560402 ARMCX2Q7L311 632 aa16.04■□□□□ 0.16
SMAD3-214ENST00000560402 ANKRD33Q7Z3H0 272 aa16.04■□□□□ 0.16
SMAD3-214ENST00000560402 PCSK9Q8NBP7 692 aaKnown RBP16.04■□□□□ 0.16
SMAD3-214ENST00000560402 STAG1Q8WVM7 1258 aa16.04■□□□□ 0.16
SMAD3-214ENST00000560402 TRIM43Q96BQ3 446 aaPredicted RBP16.04■□□□□ 0.16
SMAD3-214ENST00000560402 FGD4Q96M96 766 aa16.04■□□□□ 0.16
SMAD3-214ENST00000560402 UPF3AQ9H1J1 476 aaKnown RBP16.04■□□□□ 0.16
SMAD3-214ENST00000560402 HELLSQ9NRZ9 838 aa16.04■□□□□ 0.16
SMAD3-214ENST00000560402 STX8Q9UNK0 236 aa16.04■□□□□ 0.16
SMAD3-214ENST00000560402 LCTP09848 1927 aa16.04■□□□□ 0.16
SMAD3-214ENST00000560402 FOXP2O15409 715 aa16.03■□□□□ 0.16
SMAD3-214ENST00000560402 ORC4O43929 436 aa16.03■□□□□ 0.16
SMAD3-214ENST00000560402 PQBP1O60828 265 aaKnown RBP16.03■□□□□ 0.16
SMAD3-214ENST00000560402 SMAD3P84022 425 aaKnown RBP16.03■□□□□ 0.16
SMAD3-214ENST00000560402 SHHQ15465 462 aa16.03■□□□□ 0.16
SMAD3-214ENST00000560402 ALX1Q15699 326 aa16.03■□□□□ 0.16
SMAD3-214ENST00000560402 ANKRD45Q5TZF3 282 aa16.03■□□□□ 0.16
SMAD3-214ENST00000560402 CCSAPQ6IQ19 270 aaPredicted RBP16.03■□□□□ 0.16
SMAD3-214ENST00000560402 SH3RF1Q7Z6J0 888 aa16.03■□□□□ 0.16
SMAD3-214ENST00000560402 GLT1D1Q96MS3 346 aa16.03■□□□□ 0.16
SMAD3-214ENST00000560402 RNF146Q9NTX7 359 aa16.03■□□□□ 0.16
SMAD3-214ENST00000560402 ZNF536O15090 1300 aa16.02■□□□□ 0.16
SMAD3-214ENST00000560402 TMEM265A0A087WTH1 108 aa16.02■□□□□ 0.16
SMAD3-214ENST00000560402 DCDC2CA8MYV0 355 aa16.02■□□□□ 0.16
SMAD3-214ENST00000560402 C6orf222P0C671 652 aaPredicted RBP16.02■□□□□ 0.16
SMAD3-214ENST00000560402 RAG1P15918 1043 aa16.02■□□□□ 0.16
SMAD3-214ENST00000560402 NOVP48745 357 aa16.02■□□□□ 0.16
SMAD3-214ENST00000560402 GJA9P57773 515 aa16.02■□□□□ 0.16
SMAD3-214ENST00000560402 NKX3-2P78367 333 aa16.02■□□□□ 0.16
SMAD3-214ENST00000560402 KCNA10Q16322 511 aa16.02■□□□□ 0.16
SMAD3-214ENST00000560402 C9orf50Q5SZB4 431 aa16.02■□□□□ 0.16
SMAD3-214ENST00000560402 RCSD1Q6JBY9 416 aa16.02■□□□□ 0.16
SMAD3-214ENST00000560402 CCDC129Q6ZRS4 1044 aa16.02■□□□□ 0.16
SMAD3-214ENST00000560402 CCDC144CPQ8IYA2 1237 aa16.02■□□□□ 0.16
SMAD3-214ENST00000560402 FAM133AQ8N9E0 248 aa16.02■□□□□ 0.16
SMAD3-214ENST00000560402 DCAF4Q8WV16 495 aa16.02■□□□□ 0.16
SMAD3-214ENST00000560402 A1CFQ9NQ94 594 aaKnown RBP16.02■□□□□ 0.16
SMAD3-214ENST00000560402 HOMER2Q9NSB8 354 aa16.02■□□□□ 0.16
SMAD3-214ENST00000560402 ASB14A6NK59 587 aa16.01■□□□□ 0.15
SMAD3-214ENST00000560402 FGRP09769 529 aa16.01■□□□□ 0.15
SMAD3-214ENST00000560402 MCCP23508 829 aa16.01■□□□□ 0.15
SMAD3-214ENST00000560402 PDE1AP54750 535 aa16.01■□□□□ 0.15
SMAD3-214ENST00000560402 FPGSQ05932 587 aa16.01■□□□□ 0.15
SMAD3-214ENST00000560402 CTDSPL2Q05D32 466 aa16.01■□□□□ 0.15
SMAD3-214ENST00000560402 CCDC144BQ3MJ40 725 aa16.01■□□□□ 0.15
SMAD3-214ENST00000560402 KATNBL1Q9H079 304 aa16.01■□□□□ 0.15
SMAD3-214ENST00000560402 TMEM39AQ9NV64 488 aa16.01■□□□□ 0.15
SMAD3-214ENST00000560402 A0A0U1RQG5 324 aaPredicted RBP16■□□□□ 0.15
SMAD3-214ENST00000560402 RANBP6O60518 1105 aaKnown RBP16■□□□□ 0.15
SMAD3-214ENST00000560402 IGHDP01880 384 aa16■□□□□ 0.15
SMAD3-214ENST00000560402 PCP11498 1178 aaKnown RBP16■□□□□ 0.15
SMAD3-214ENST00000560402 FAAP100Q0VG06 881 aa16■□□□□ 0.15
SMAD3-214ENST00000560402 KCTD1Q719H9 257 aa16■□□□□ 0.15
SMAD3-214ENST00000560402 RNPC3Q96LT9 517 aaKnown RBP16■□□□□ 0.15
SMAD3-214ENST00000560402 GUCD1Q96NT3 240 aa16■□□□□ 0.15
SMAD3-214ENST00000560402 TRERF1Q96PN7 1200 aa16■□□□□ 0.15
SMAD3-214ENST00000560402 IL17RBQ9NRM6 502 aa16■□□□□ 0.15
SMAD3-214ENST00000560402 PRR12Q9ULL5 1215 aa16■□□□□ 0.15
SMAD3-214ENST00000560402 LOC102724159A0A0B4J2E5 919 aa15.99■□□□□ 0.15
SMAD3-214ENST00000560402 MYADML2A6NDP7 307 aa15.99■□□□□ 0.15
SMAD3-214ENST00000560402 DLL1O00548 723 aa15.99■□□□□ 0.15
SMAD3-214ENST00000560402 ADCY6O43306 1168 aa15.99■□□□□ 0.15
SMAD3-214ENST00000560402 ASGR1P07306 291 aa15.99■□□□□ 0.15
SMAD3-214ENST00000560402 ALAS1P13196 640 aa15.99■□□□□ 0.15
SMAD3-214ENST00000560402 NT5C2P49902 561 aa15.99■□□□□ 0.15
SMAD3-214ENST00000560402 CNTN2Q02246 1040 aa15.99■□□□□ 0.15
SMAD3-214ENST00000560402 PWP2Q15269 919 aaKnown RBP15.99■□□□□ 0.15
SMAD3-214ENST00000560402 MCMDC2Q4G0Z9 681 aa15.99■□□□□ 0.15
SMAD3-214ENST00000560402 VPS53Q5VIR6 699 aa15.99■□□□□ 0.15
SMAD3-214ENST00000560402 CCDC174Q6PII3 467 aa15.99■□□□□ 0.15
SMAD3-214ENST00000560402 AGBL1Q96MI9 1066 aa15.99■□□□□ 0.15
SMAD3-214ENST00000560402 TCP11L1Q9NUJ3 509 aa15.99■□□□□ 0.15
SMAD3-214ENST00000560402 TBX21Q9UL17 535 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms