RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 TTC38Q5R3I4 469 aa12.14□□□□□ -0.47
CRTC3-209ENST00000560320 L1TD1Q5T7N2 865 aaKnown RBP12.14□□□□□ -0.47
CRTC3-209ENST00000560320 PIK3AP1Q6ZUJ8 805 aa12.14□□□□□ -0.47
CRTC3-209ENST00000560320 USP50Q70EL3 339 aaPredicted RBP12.14□□□□□ -0.47
CRTC3-209ENST00000560320 FSIP1Q8NA03 581 aa12.14□□□□□ -0.47
CRTC3-209ENST00000560320 MRPS27Q92552 414 aaKnown RBP12.14□□□□□ -0.47
CRTC3-209ENST00000560320 L3MBTL3Q96JM7 780 aaPredicted RBP12.14□□□□□ -0.47
CRTC3-209ENST00000560320 PGBD1Q96JS3 809 aa12.14□□□□□ -0.47
CRTC3-209ENST00000560320 ZMYND12Q9H0C1 365 aa12.14□□□□□ -0.47
CRTC3-209ENST00000560320 NUP62CLQ9H1M0 184 aa12.14□□□□□ -0.47
CRTC3-209ENST00000560320 TMEM63CQ9P1W3 806 aa12.14□□□□□ -0.47
CRTC3-209ENST00000560320 PCDHA7Q9UN72 937 aa12.14□□□□□ -0.47
CRTC3-209ENST00000560320 A0A1W2PRG0 241 aa12.13□□□□□ -0.47
CRTC3-209ENST00000560320 MARCKSP29966 332 aaPredicted RBP12.13□□□□□ -0.47
CRTC3-209ENST00000560320 ECE1P42892 770 aa12.13□□□□□ -0.47
CRTC3-209ENST00000560320 HIRAP54198 1017 aaPredicted RBP12.13□□□□□ -0.47
CRTC3-209ENST00000560320 ZNF445P59923 1031 aa12.13□□□□□ -0.47
CRTC3-209ENST00000560320 NONOQ15233 471 aaKnown RBP eCLIP12.13□□□□□ -0.47
CRTC3-209ENST00000560320 ZYXQ15942 572 aaKnown RBP12.13□□□□□ -0.47
CRTC3-209ENST00000560320 CDC37Q16543 378 aaPredicted RBP12.13□□□□□ -0.47
CRTC3-209ENST00000560320 MCTP2Q6DN12 878 aa12.13□□□□□ -0.47
CRTC3-209ENST00000560320 CHADLQ6NUI6 762 aa12.13□□□□□ -0.47
CRTC3-209ENST00000560320 BTNL9Q6UXG8 535 aa12.13□□□□□ -0.47
CRTC3-209ENST00000560320 FBXO11Q86XK2 927 aa12.13□□□□□ -0.47
CRTC3-209ENST00000560320 SCYL3Q8IZE3 742 aa12.13□□□□□ -0.47
CRTC3-209ENST00000560320 REXO1Q8N1G1 1221 aaKnown RBP12.13□□□□□ -0.47
CRTC3-209ENST00000560320 KRI1Q8N9T8 703 aaKnown RBP12.13□□□□□ -0.47
CRTC3-209ENST00000560320 ACER1Q8TDN7 264 aa12.13□□□□□ -0.47
CRTC3-209ENST00000560320 LPAR1Q92633 364 aa12.13□□□□□ -0.47
CRTC3-209ENST00000560320 CUL5Q93034 780 aa12.13□□□□□ -0.47
CRTC3-209ENST00000560320 COA7Q96BR5 231 aa12.13□□□□□ -0.47
CRTC3-209ENST00000560320 MTMR8Q96EF0 704 aa12.13□□□□□ -0.47
CRTC3-209ENST00000560320 WRNIP1Q96S55 665 aa12.13□□□□□ -0.47
CRTC3-209ENST00000560320 AMNQ9BXJ7 453 aa12.13□□□□□ -0.47
CRTC3-209ENST00000560320 FEM1BQ9UK73 627 aa12.13□□□□□ -0.47
CRTC3-209ENST00000560320 WDR46O15213 610 aaKnown RBP12.12□□□□□ -0.47
CRTC3-209ENST00000560320 CTAGE5O15320 804 aa12.12□□□□□ -0.47
CRTC3-209ENST00000560320 PPP1R12BO60237 982 aaPredicted RBP12.12□□□□□ -0.47
CRTC3-209ENST00000560320 PLA2G6O60733 806 aa12.12□□□□□ -0.47
CRTC3-209ENST00000560320 KINO60870 393 aaKnown RBP12.12□□□□□ -0.47
CRTC3-209ENST00000560320 EPHX2P34913 555 aa12.12□□□□□ -0.47
CRTC3-209ENST00000560320 MAP2K1Q02750 393 aaPredicted RBP12.12□□□□□ -0.47
CRTC3-209ENST00000560320 FAM160A1Q05DH4 1040 aa12.12□□□□□ -0.47
CRTC3-209ENST00000560320 PTPAQ15257 358 aa12.12□□□□□ -0.47
CRTC3-209ENST00000560320 NPY5RQ15761 445 aa12.12□□□□□ -0.47
CRTC3-209ENST00000560320 QRICH1Q2TAL8 776 aa12.12□□□□□ -0.47
CRTC3-209ENST00000560320 FAM83BQ5T0W9 1011 aa12.12□□□□□ -0.47
CRTC3-209ENST00000560320 SPICE1Q8N0Z3 855 aa12.12□□□□□ -0.47
CRTC3-209ENST00000560320 ZC3H15Q8WU90 426 aaKnown RBP12.12□□□□□ -0.47
CRTC3-209ENST00000560320 TNFRSF25Q93038 417 aa12.12□□□□□ -0.47
CRTC3-209ENST00000560320 SHISA4Q96DD7 197 aa12.12□□□□□ -0.47
CRTC3-209ENST00000560320 NUP88Q99567 741 aaPredicted RBP12.12□□□□□ -0.47
CRTC3-209ENST00000560320 TNMDQ9H2S6 317 aa12.12□□□□□ -0.47
CRTC3-209ENST00000560320 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.12□□□□□ -0.47
CRTC3-209ENST00000560320 FAM13BQ9NYF5 915 aa12.12□□□□□ -0.47
CRTC3-209ENST00000560320 ZNF112Q9UJU3 913 aa12.12□□□□□ -0.47
CRTC3-209ENST00000560320 PCDHA6Q9UN73 950 aa12.12□□□□□ -0.47
CRTC3-209ENST00000560320 CTDP1Q9Y5B0 961 aaPredicted RBP12.12□□□□□ -0.47
CRTC3-209ENST00000560320 PCDHB6Q9Y5E3 794 aa12.12□□□□□ -0.47
CRTC3-209ENST00000560320 PCDHA8Q9Y5H6 950 aa12.12□□□□□ -0.47
CRTC3-209ENST00000560320 PCDHA1Q9Y5I3 950 aa12.12□□□□□ -0.47
CRTC3-209ENST00000560320 MORC2Q9Y6X9 1032 aaPredicted RBP12.12□□□□□ -0.47
CRTC3-209ENST00000560320 THSD7BQ9C0I4 1608 aa12.11□□□□□ -0.47
CRTC3-209ENST00000560320 LIG1P18858 919 aa12.11□□□□□ -0.47
CRTC3-209ENST00000560320 CMA1P23946 247 aa12.11□□□□□ -0.47
CRTC3-209ENST00000560320 INPP5BP32019 993 aa12.11□□□□□ -0.47
CRTC3-209ENST00000560320 TOB1P50616 345 aaPredicted RBP12.11□□□□□ -0.47
CRTC3-209ENST00000560320 ZNF174Q15697 407 aa12.11□□□□□ -0.47
CRTC3-209ENST00000560320 MAP3K11Q16584 847 aa12.11□□□□□ -0.47
CRTC3-209ENST00000560320 TYW1BQ6NUM6 668 aa12.11□□□□□ -0.47
CRTC3-209ENST00000560320 LRSAM1Q6UWE0 723 aa12.11□□□□□ -0.47
CRTC3-209ENST00000560320 KRT26Q7Z3Y9 468 aa12.11□□□□□ -0.47
CRTC3-209ENST00000560320 FERMT2Q96AC1 680 aa12.11□□□□□ -0.47
CRTC3-209ENST00000560320 WDR18Q9BV38 432 aa12.11□□□□□ -0.47
CRTC3-209ENST00000560320 MCOLN1Q9GZU1 580 aa12.11□□□□□ -0.47
CRTC3-209ENST00000560320 KIAA1683Q9H0B3 1180 aa12.11□□□□□ -0.47
CRTC3-209ENST00000560320 PSTPIP2Q9H939 334 aa12.11□□□□□ -0.47
CRTC3-209ENST00000560320 RIC8AQ9NPQ8 531 aa12.11□□□□□ -0.47
CRTC3-209ENST00000560320 DACT1Q9NYF0 836 aa12.11□□□□□ -0.47
CRTC3-209ENST00000560320 PRR12Q9ULL5 1215 aa12.11□□□□□ -0.47
CRTC3-209ENST00000560320 PASKQ96RG2 1323 aa12.11□□□□□ -0.47
CRTC3-209ENST00000560320 MYH7BA7E2Y1 1941 aa12.1□□□□□ -0.47
CRTC3-209ENST00000560320 PHIPQ8WWQ0 1821 aa12.1□□□□□ -0.47
CRTC3-209ENST00000560320 SYCE3A1L190 88 aa12.1□□□□□ -0.47
CRTC3-209ENST00000560320 FAM205CA6NFA0 338 aa12.1□□□□□ -0.47
CRTC3-209ENST00000560320 IREB2P48200 963 aaKnown RBP12.1□□□□□ -0.47
CRTC3-209ENST00000560320 ORC2Q13416 577 aaPredicted RBP12.1□□□□□ -0.47
CRTC3-209ENST00000560320 NOL9Q5SY16 702 aaKnown RBP12.1□□□□□ -0.47
CRTC3-209ENST00000560320 PRAMEF18Q5VWM3 479 aa12.1□□□□□ -0.47
CRTC3-209ENST00000560320 PNMA8AQ86V59 439 aaPredicted RBP12.1□□□□□ -0.47
CRTC3-209ENST00000560320 TEX2Q8IWB9 1127 aa12.1□□□□□ -0.47
CRTC3-209ENST00000560320 RASGRP4Q8TDF6 673 aa12.1□□□□□ -0.47
CRTC3-209ENST00000560320 KIFC2Q96AC6 838 aa12.1□□□□□ -0.47
CRTC3-209ENST00000560320 CCDC34Q96HJ3 373 aa12.1□□□□□ -0.47
CRTC3-209ENST00000560320 NAP1L4Q99733 375 aaKnown RBP12.1□□□□□ -0.47
CRTC3-209ENST00000560320 CLSTN2Q9H4D0 955 aa12.1□□□□□ -0.47
CRTC3-209ENST00000560320 BIN2Q9UBW5 565 aaPredicted RBP12.1□□□□□ -0.47
CRTC3-209ENST00000560320 PNMA2Q9UL42 364 aa12.1□□□□□ -0.47
CRTC3-209ENST00000560320 SRPRBQ9Y5M8 271 aaKnown RBP12.1□□□□□ -0.47
CRTC3-209ENST00000560320 CSADQ9Y600 493 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms