RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 CYP2C18P33260 490 aa23.74■■□□□ 1.39
RABGGTA-214ENST00000560163 UBE3CQ15386 1083 aa23.74■■□□□ 1.39
RABGGTA-214ENST00000560163 SPC25Q9HBM1 224 aa23.74■■□□□ 1.39
RABGGTA-214ENST00000560163 YBX2Q9Y2T7 364 aaKnown RBP23.74■■□□□ 1.39
RABGGTA-214ENST00000560163 SLC4A4Q9Y6R1 1079 aa23.74■■□□□ 1.39
RABGGTA-214ENST00000560163 TLR3O15455 904 aaKnown RBP23.73■■□□□ 1.39
RABGGTA-214ENST00000560163 NDUFB10O96000 172 aa23.73■■□□□ 1.39
RABGGTA-214ENST00000560163 ATP5JP18859 108 aa23.73■■□□□ 1.39
RABGGTA-214ENST00000560163 RASA1P20936 1047 aa23.73■■□□□ 1.39
RABGGTA-214ENST00000560163 ARMCX2Q7L311 632 aa23.73■■□□□ 1.39
RABGGTA-214ENST00000560163 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.73■■□□□ 1.39
RABGGTA-214ENST00000560163 NKX2-4Q9H2Z4 354 aa23.73■■□□□ 1.39
RABGGTA-214ENST00000560163 BOLA2Q9H3K6 86 aa23.73■■□□□ 1.39
RABGGTA-214ENST00000560163 FGBP02675 491 aa23.72■■□□□ 1.39
RABGGTA-214ENST00000560163 IGFBP4P22692 258 aa23.72■■□□□ 1.39
RABGGTA-214ENST00000560163 CPXCR1Q8N123 301 aa23.72■■□□□ 1.39
RABGGTA-214ENST00000560163 HAUS7Q99871 368 aa23.72■■□□□ 1.39
RABGGTA-214ENST00000560163 PUS7LQ9H0K6 701 aaKnown RBP23.72■■□□□ 1.39
RABGGTA-214ENST00000560163 SLC28A3Q9HAS3 691 aa23.72■■□□□ 1.39
RABGGTA-214ENST00000560163 SLC38A10Q9HBR0 1119 aa23.72■■□□□ 1.39
RABGGTA-214ENST00000560163 ASTN1O14525 1302 aa23.71■■□□□ 1.39
RABGGTA-214ENST00000560163 UMODL1Q5DID0 1318 aa23.71■■□□□ 1.39
RABGGTA-214ENST00000560163 ZBED4O75132 1171 aa23.71■■□□□ 1.39
RABGGTA-214ENST00000560163 PLA2G5P39877 138 aa23.71■■□□□ 1.39
RABGGTA-214ENST00000560163 CCDC144CPQ8IYA2 1237 aa23.71■■□□□ 1.39
RABGGTA-214ENST00000560163 ANKRD35Q8N283 1001 aa23.71■■□□□ 1.39
RABGGTA-214ENST00000560163 DDRGK1Q96HY6 314 aa23.71■■□□□ 1.39
RABGGTA-214ENST00000560163 RAVER2Q9HCJ3 691 aaKnown RBP23.71■■□□□ 1.39
RABGGTA-214ENST00000560163 GRIN2DO15399 1336 aa23.7■■□□□ 1.38
RABGGTA-214ENST00000560163 APBB1O00213 710 aa23.7■■□□□ 1.38
RABGGTA-214ENST00000560163 BMP1P13497 986 aa23.7■■□□□ 1.38
RABGGTA-214ENST00000560163 SBK1Q52WX2 424 aa23.7■■□□□ 1.38
RABGGTA-214ENST00000560163 SIRT2Q8IXJ6 389 aa23.7■■□□□ 1.38
RABGGTA-214ENST00000560163 CHST13Q8NET6 341 aa23.7■■□□□ 1.38
RABGGTA-214ENST00000560163 VWCEQ96DN2 955 aa23.7■■□□□ 1.38
RABGGTA-214ENST00000560163 ARPP21Q9UBL0 812 aaPredicted RBP23.7■■□□□ 1.38
RABGGTA-214ENST00000560163 FBXO40Q9UH90 709 aa23.7■■□□□ 1.38
RABGGTA-214ENST00000560163 MYH7P12883 1935 aa23.7■■□□□ 1.38
RABGGTA-214ENST00000560163 IGKV6D-41A0A0C4DH26 115 aa23.69■■□□□ 1.38
RABGGTA-214ENST00000560163 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.69■■□□□ 1.38
RABGGTA-214ENST00000560163 SLC4A3P48751 1232 aa23.69■■□□□ 1.38
RABGGTA-214ENST00000560163 BEX3Q00994 111 aa23.69■■□□□ 1.38
RABGGTA-214ENST00000560163 PANK1Q8TE04 598 aa23.69■■□□□ 1.38
RABGGTA-214ENST00000560163 MKL1Q969V6 931 aa23.69■■□□□ 1.38
RABGGTA-214ENST00000560163 HIPK3Q9H422 1215 aa23.69■■□□□ 1.38
RABGGTA-214ENST00000560163 GNEQ9Y223 722 aaKnown RBP23.69■■□□□ 1.38
RABGGTA-214ENST00000560163 OAZ1P54368 228 aa23.68■■□□□ 1.38
RABGGTA-214ENST00000560163 CNTN2Q02246 1040 aa23.68■■□□□ 1.38
RABGGTA-214ENST00000560163 CXCL17Q6UXB2 119 aa23.68■■□□□ 1.38
RABGGTA-214ENST00000560163 OTOP2Q7RTS6 562 aa23.68■■□□□ 1.38
RABGGTA-214ENST00000560163 RPAP2Q8IXW5 612 aaPredicted RBP23.68■■□□□ 1.38
RABGGTA-214ENST00000560163 MTIF3Q9H2K0 278 aaKnown RBP23.68■■□□□ 1.38
RABGGTA-214ENST00000560163 CLIP2Q9UDT6 1046 aa23.68■■□□□ 1.38
RABGGTA-214ENST00000560163 CABYRO75952 493 aa23.67■■□□□ 1.38
RABGGTA-214ENST00000560163 TNFAIP2Q03169 654 aa23.67■■□□□ 1.38
RABGGTA-214ENST00000560163 FAM133AQ8N9E0 248 aa23.67■■□□□ 1.38
RABGGTA-214ENST00000560163 KIFC2Q96AC6 838 aa23.67■■□□□ 1.38
RABGGTA-214ENST00000560163 STRBPQ96SI9 672 aaKnown RBP23.67■■□□□ 1.38
RABGGTA-214ENST00000560163 FEM1BQ9UK73 627 aa23.67■■□□□ 1.38
RABGGTA-214ENST00000560163 GSG1L2A8MUP6 293 aa23.66■■□□□ 1.38
RABGGTA-214ENST00000560163 RAB11FIP3O75154 756 aa23.66■■□□□ 1.38
RABGGTA-214ENST00000560163 RABGGTBP53611 331 aa23.66■■□□□ 1.38
RABGGTA-214ENST00000560163 ITGA7Q13683 1181 aa23.66■■□□□ 1.38
RABGGTA-214ENST00000560163 NECAB3Q96P71 396 aaPredicted RBP23.66■■□□□ 1.38
RABGGTA-214ENST00000560163 NOC4LQ9BVI4 516 aaKnown RBP23.66■■□□□ 1.38
RABGGTA-214ENST00000560163 WNT8AQ9H1J5 351 aa23.66■■□□□ 1.38
RABGGTA-214ENST00000560163 MYH4Q9Y623 1939 aa23.66■■□□□ 1.38
RABGGTA-214ENST00000560163 TCF20Q9UGU0 1960 aaKnown RBP23.65■■□□□ 1.38
RABGGTA-214ENST00000560163 CCL23P55773 120 aa23.65■■□□□ 1.38
RABGGTA-214ENST00000560163 GIMAP6Q6P9H5 292 aa23.65■■□□□ 1.38
RABGGTA-214ENST00000560163 SEZ6LQ9BYH1 1024 aa23.65■■□□□ 1.38
RABGGTA-214ENST00000560163 TRPV6Q9H1D0 765 aa23.65■■□□□ 1.38
RABGGTA-214ENST00000560163 MKNK2Q9HBH9 465 aa23.65■■□□□ 1.38
RABGGTA-214ENST00000560163 SYNPO2Q9UMS6 1093 aa23.65■■□□□ 1.38
RABGGTA-214ENST00000560163 SOWAHBA6NEL2 793 aa23.64■■□□□ 1.37
RABGGTA-214ENST00000560163 MYOGP15173 224 aa23.64■■□□□ 1.37
RABGGTA-214ENST00000560163 ZSCAN25Q6NSZ9 544 aa23.64■■□□□ 1.37
RABGGTA-214ENST00000560163 IL27Q8NEV9 243 aa23.64■■□□□ 1.37
RABGGTA-214ENST00000560163 FAM122AQ96E09 287 aa23.64■■□□□ 1.37
RABGGTA-214ENST00000560163 CTDP1Q9Y5B0 961 aaPredicted RBP23.64■■□□□ 1.37
RABGGTA-214ENST00000560163 PCDHA11Q9Y5I1 949 aa23.64■■□□□ 1.37
RABGGTA-214ENST00000560163 B4GALT4O60513 344 aa23.63■■□□□ 1.37
RABGGTA-214ENST00000560163 POU3F3P20264 500 aaPredicted RBP23.63■■□□□ 1.37
RABGGTA-214ENST00000560163 PTGS1P23219 599 aa23.63■■□□□ 1.37
RABGGTA-214ENST00000560163 TFF2Q03403 129 aa23.63■■□□□ 1.37
RABGGTA-214ENST00000560163 FSCN1Q16658 493 aaKnown RBP23.63■■□□□ 1.37
RABGGTA-214ENST00000560163 TLK2Q86UE8 772 aa23.63■■□□□ 1.37
RABGGTA-214ENST00000560163 STK11IPQ8N1F8 1099 aa23.63■■□□□ 1.37
RABGGTA-214ENST00000560163 GMCL1P1Q8NEA9 526 aa23.63■■□□□ 1.37
RABGGTA-214ENST00000560163 AGBL1Q96MI9 1066 aa23.63■■□□□ 1.37
RABGGTA-214ENST00000560163 BCL11AQ9H165 835 aa23.63■■□□□ 1.37
RABGGTA-214ENST00000560163 TSPYL2Q9H2G4 693 aaPredicted RBP23.63■■□□□ 1.37
RABGGTA-214ENST00000560163 A1CFQ9NQ94 594 aaKnown RBP23.63■■□□□ 1.37
RABGGTA-214ENST00000560163 MTMR4Q9NYA4 1195 aa23.63■■□□□ 1.37
RABGGTA-214ENST00000560163 SLC4A7Q9Y6M7 1214 aa23.63■■□□□ 1.37
RABGGTA-214ENST00000560163 ZNF536O15090 1300 aa23.62■■□□□ 1.37
RABGGTA-214ENST00000560163 HMMRO75330 724 aa23.62■■□□□ 1.37
RABGGTA-214ENST00000560163 SMPD1P17405 629 aa23.62■■□□□ 1.37
RABGGTA-214ENST00000560163 PPP2R2DQ66LE6 453 aa23.62■■□□□ 1.37
RABGGTA-214ENST00000560163 RPUSD2Q8IZ73 545 aaKnown RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms