RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 DHX32Q7L7V1 743 aaKnown RBP9.99□□□□□ -0.81
USP3-217ENST00000560070 ANKRD35Q8N283 1001 aa9.99□□□□□ -0.81
USP3-217ENST00000560070 CCDC82Q8N4S0 544 aa9.99□□□□□ -0.81
USP3-217ENST00000560070 SLAIN1Q8ND83 568 aa9.99□□□□□ -0.81
USP3-217ENST00000560070 SHCBP1Q8NEM2 672 aa9.99□□□□□ -0.81
USP3-217ENST00000560070 USP6NLQ92738 828 aa9.99□□□□□ -0.81
USP3-217ENST00000560070 TRERF1Q96PN7 1200 aa9.99□□□□□ -0.81
USP3-217ENST00000560070 TMEM106CQ9BVX2 250 aa9.99□□□□□ -0.81
USP3-217ENST00000560070 RNF208Q9H0X6 261 aa9.99□□□□□ -0.81
USP3-217ENST00000560070 UNC93B1Q9H1C4 597 aa9.99□□□□□ -0.81
USP3-217ENST00000560070 FLRT1Q9NZU1 646 aa9.99□□□□□ -0.81
USP3-217ENST00000560070 CCPG1Q9ULG6 757 aa9.99□□□□□ -0.81
USP3-217ENST00000560070 POTEFA5A3E0 1075 aa9.98□□□□□ -0.81
USP3-217ENST00000560070 PLA2G6O60733 806 aa9.98□□□□□ -0.81
USP3-217ENST00000560070 EN2P19622 333 aaPredicted RBP9.98□□□□□ -0.81
USP3-217ENST00000560070 CNGA1P29973 690 aa9.98□□□□□ -0.81
USP3-217ENST00000560070 CYP2C19P33261 490 aa9.98□□□□□ -0.81
USP3-217ENST00000560070 EXOSC10Q01780 885 aaKnown RBP9.98□□□□□ -0.81
USP3-217ENST00000560070 TSGA10IPQ3SY00 556 aa9.98□□□□□ -0.81
USP3-217ENST00000560070 USH1GQ495M9 461 aa9.98□□□□□ -0.81
USP3-217ENST00000560070 ASPRV1Q53RT3 343 aa9.98□□□□□ -0.81
USP3-217ENST00000560070 MUM1L1Q5H9M0 696 aa9.98□□□□□ -0.81
USP3-217ENST00000560070 NSMFQ6X4W1 530 aa9.98□□□□□ -0.81
USP3-217ENST00000560070 CMTR1Q8N1G2 835 aaKnown RBP9.98□□□□□ -0.81
USP3-217ENST00000560070 SOCS4Q8WXH5 440 aa9.98□□□□□ -0.81
USP3-217ENST00000560070 TRIB2Q92519 343 aa9.98□□□□□ -0.81
USP3-217ENST00000560070 ARMC5Q96C12 935 aa9.98□□□□□ -0.81
USP3-217ENST00000560070 ZNF333Q96JL9 665 aa9.98□□□□□ -0.81
USP3-217ENST00000560070 TMEM87BQ96K49 555 aa9.98□□□□□ -0.81
USP3-217ENST00000560070 LARP6Q9BRS8 491 aaKnown RBP9.98□□□□□ -0.81
USP3-217ENST00000560070 RANBP17Q9H2T7 1088 aaKnown RBP9.98□□□□□ -0.81
USP3-217ENST00000560070 JMJD4Q9H9V9 463 aa9.98□□□□□ -0.81
USP3-217ENST00000560070 RNF146Q9NTX7 359 aa9.98□□□□□ -0.81
USP3-217ENST00000560070 MAD2L2Q9UI95 211 aa9.98□□□□□ -0.81
USP3-217ENST00000560070 ZNF536O15090 1300 aa9.98□□□□□ -0.81
USP3-217ENST00000560070 BAZ2AQ9UIF9 1905 aaKnown RBP9.97□□□□□ -0.81
USP3-217ENST00000560070 ATP2A1O14983 1001 aa9.97□□□□□ -0.81
USP3-217ENST00000560070 TFRCP02786 760 aaKnown RBP9.97□□□□□ -0.81
USP3-217ENST00000560070 FDX1P10109 184 aa9.97□□□□□ -0.81
USP3-217ENST00000560070 CASTP20810 708 aaKnown RBP9.97□□□□□ -0.81
USP3-217ENST00000560070 CNTN2Q02246 1040 aa9.97□□□□□ -0.81
USP3-217ENST00000560070 CACNB2Q08289 660 aaPredicted RBP9.97□□□□□ -0.81
USP3-217ENST00000560070 GRB14Q14449 540 aa9.97□□□□□ -0.81
USP3-217ENST00000560070 GRM4Q14833 912 aa9.97□□□□□ -0.81
USP3-217ENST00000560070 MFSD14CQ5VZR4 134 aa9.97□□□□□ -0.81
USP3-217ENST00000560070 BLOC1S2Q6QNY1 142 aa9.97□□□□□ -0.81
USP3-217ENST00000560070 SYNE3Q6ZMZ3 975 aa9.97□□□□□ -0.81
USP3-217ENST00000560070 Q6ZUG5 572 aa9.97□□□□□ -0.81
USP3-217ENST00000560070 HOMER1Q86YM7 354 aa9.97□□□□□ -0.81
USP3-217ENST00000560070 ZNF654Q8IZM8 581 aa9.97□□□□□ -0.81
USP3-217ENST00000560070 TMTC2Q8N394 836 aa9.97□□□□□ -0.81
USP3-217ENST00000560070 CHST13Q8NET6 341 aa9.97□□□□□ -0.81
USP3-217ENST00000560070 PXYLP1Q8TE99 480 aa9.97□□□□□ -0.81
USP3-217ENST00000560070 KCNB2Q92953 911 aa9.97□□□□□ -0.81
USP3-217ENST00000560070 PURBQ96QR8 312 aaKnown RBP9.97□□□□□ -0.81
USP3-217ENST00000560070 APBA2Q99767 749 aa9.97□□□□□ -0.81
USP3-217ENST00000560070 BRPF3Q9ULD4 1205 aa9.97□□□□□ -0.81
USP3-217ENST00000560070 SLC12A7Q9Y666 1083 aa9.97□□□□□ -0.81
USP3-217ENST00000560070 FOCADQ5VW36 1801 aa9.97□□□□□ -0.81
USP3-217ENST00000560070 CDK5RAP2Q96SN8 1893 aa9.96□□□□□ -0.81
USP3-217ENST00000560070 hCG_1642624A0A1W2PR95 340 aa9.96□□□□□ -0.82
USP3-217ENST00000560070 PALM3A6NDB9 673 aaPredicted RBP9.96□□□□□ -0.82
USP3-217ENST00000560070 POTEB2H3BUK9 544 aa9.96□□□□□ -0.82
USP3-217ENST00000560070 HMGCRP04035 888 aa9.96□□□□□ -0.82
USP3-217ENST00000560070 ICAM1P05362 532 aa9.96□□□□□ -0.82
USP3-217ENST00000560070 XRCC5P13010 732 aaKnown RBP9.96□□□□□ -0.82
USP3-217ENST00000560070 PSMA5P28066 241 aa9.96□□□□□ -0.82
USP3-217ENST00000560070 CCND3P30281 292 aaPredicted RBP9.96□□□□□ -0.82
USP3-217ENST00000560070 COPB2P35606 906 aa9.96□□□□□ -0.82
USP3-217ENST00000560070 OAZ1P54368 228 aa9.96□□□□□ -0.82
USP3-217ENST00000560070 APOBRQ0VD83 1088 aa9.96□□□□□ -0.82
USP3-217ENST00000560070 TROAPQ12815 778 aa9.96□□□□□ -0.82
USP3-217ENST00000560070 BAATQ14032 418 aaPredicted RBP9.96□□□□□ -0.82
USP3-217ENST00000560070 CDC37Q16543 378 aaPredicted RBP9.96□□□□□ -0.82
USP3-217ENST00000560070 SLC35G1Q2M3R5 365 aa9.96□□□□□ -0.82
USP3-217ENST00000560070 QRICH1Q2TAL8 776 aa9.96□□□□□ -0.82
USP3-217ENST00000560070 ZNF792Q3KQV3 632 aa9.96□□□□□ -0.82
USP3-217ENST00000560070 FBXO11Q86XK2 927 aa9.96□□□□□ -0.82
USP3-217ENST00000560070 CTCFLQ8NI51 663 aaPredicted RBP9.96□□□□□ -0.82
USP3-217ENST00000560070 TBC1D5Q92609 795 aa9.96□□□□□ -0.82
USP3-217ENST00000560070 DEFB118Q96PH6 123 aa9.96□□□□□ -0.82
USP3-217ENST00000560070 PIGSQ96S52 555 aa9.96□□□□□ -0.82
USP3-217ENST00000560070 UPF3BQ9BZI7 483 aaKnown RBP9.96□□□□□ -0.82
USP3-217ENST00000560070 ACAD9Q9H845 621 aa9.96□□□□□ -0.82
USP3-217ENST00000560070 SLC5A4Q9NY91 659 aa9.96□□□□□ -0.82
USP3-217ENST00000560070 FBXO40Q9UH90 709 aa9.96□□□□□ -0.82
USP3-217ENST00000560070 DDX49Q9Y6V7 483 aaKnown RBP9.96□□□□□ -0.82
USP3-217ENST00000560070 CASP8AP2Q9UKL3 1982 aa9.95□□□□□ -0.82
USP3-217ENST00000560070 KLF18A0A0U1RQI7 1052 aa9.95□□□□□ -0.82
USP3-217ENST00000560070 PTPDC1A2A3K4 754 aa9.95□□□□□ -0.82
USP3-217ENST00000560070 NFIBO00712 420 aa9.95□□□□□ -0.82
USP3-217ENST00000560070 PLEKHA8P1O95397 391 aa9.95□□□□□ -0.82
USP3-217ENST00000560070 MYCNP04198 464 aaPredicted RBP9.95□□□□□ -0.82
USP3-217ENST00000560070 HMGB1P09429 215 aaKnown RBP9.95□□□□□ -0.82
USP3-217ENST00000560070 PRKAR2AP13861 404 aaKnown RBP9.95□□□□□ -0.82
USP3-217ENST00000560070 RPS6KB1P23443 525 aa9.95□□□□□ -0.82
USP3-217ENST00000560070 CALML3P27482 149 aa9.95□□□□□ -0.82
USP3-217ENST00000560070 LIFRP42702 1097 aa9.95□□□□□ -0.82
USP3-217ENST00000560070 TKFCQ3LXA3 575 aa9.95□□□□□ -0.82
USP3-217ENST00000560070 ANO1Q5XXA6 986 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms