RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 PPP1R12CQ9BZL4 782 aa24.37■■□□□ 1.49
PSEN1-225ENST00000560005 GOPCQ9HD26 462 aa24.37■■□□□ 1.49
PSEN1-225ENST00000560005 BAZ2AQ9UIF9 1905 aaKnown RBP24.37■■□□□ 1.49
PSEN1-225ENST00000560005 XIRP2A4UGR9 3374 aa24.37■■□□□ 1.49
PSEN1-225ENST00000560005 DUSP11O75319 330 aaKnown RBP24.36■■□□□ 1.49
PSEN1-225ENST00000560005 ASGR1P07306 291 aa24.36■■□□□ 1.49
PSEN1-225ENST00000560005 C6orf222P0C671 652 aaPredicted RBP24.36■■□□□ 1.49
PSEN1-225ENST00000560005 CST5P28325 142 aaPredicted RBP24.36■■□□□ 1.49
PSEN1-225ENST00000560005 PSRC1Q6PGN9 363 aaPredicted RBP24.36■■□□□ 1.49
PSEN1-225ENST00000560005 VTI1AQ96AJ9 217 aa24.36■■□□□ 1.49
PSEN1-225ENST00000560005 MBD4O95243 580 aa24.35■■□□□ 1.49
PSEN1-225ENST00000560005 GSPT1P15170 499 aaKnown RBP24.35■■□□□ 1.49
PSEN1-225ENST00000560005 SLFNL1Q499Z3 407 aa24.35■■□□□ 1.49
PSEN1-225ENST00000560005 C12orf60Q5U649 245 aa24.35■■□□□ 1.49
PSEN1-225ENST00000560005 MAMDC4Q6UXC1 1216 aa24.35■■□□□ 1.49
PSEN1-225ENST00000560005 PCSK9Q8NBP7 692 aaKnown RBP24.35■■□□□ 1.49
PSEN1-225ENST00000560005 IL27Q8NEV9 243 aa24.35■■□□□ 1.49
PSEN1-225ENST00000560005 DDX11Q96FC9 970 aa24.35■■□□□ 1.49
PSEN1-225ENST00000560005 TEX13BQ9BXU2 312 aa24.35■■□□□ 1.49
PSEN1-225ENST00000560005 KANSL2Q9H9L4 492 aa24.35■■□□□ 1.49
PSEN1-225ENST00000560005 ATP8A2Q9NTI2 1148 aa24.35■■□□□ 1.49
PSEN1-225ENST00000560005 MSRAQ9UJ68 235 aa24.35■■□□□ 1.49
PSEN1-225ENST00000560005 ADCY6O43306 1168 aa24.34■■□□□ 1.49
PSEN1-225ENST00000560005 PLA2G5P39877 138 aa24.34■■□□□ 1.49
PSEN1-225ENST00000560005 SNRNP48Q6IEG0 339 aaKnown RBP24.34■■□□□ 1.49
PSEN1-225ENST00000560005 C16orf86Q6ZW13 317 aa24.34■■□□□ 1.49
PSEN1-225ENST00000560005 FAM126BQ8IXS8 530 aa24.34■■□□□ 1.49
PSEN1-225ENST00000560005 RIPK3Q9Y572 518 aa24.34■■□□□ 1.49
PSEN1-225ENST00000560005 REV3LO60673 3130 aa24.33■■□□□ 1.49
PSEN1-225ENST00000560005 DNAJC25-GNG10A0A024R161 153 aa24.33■■□□□ 1.49
PSEN1-225ENST00000560005 A0A0U1RQG5 324 aaPredicted RBP24.33■■□□□ 1.49
PSEN1-225ENST00000560005 USP17L12C9JPN9 530 aa24.33■■□□□ 1.49
PSEN1-225ENST00000560005 USP17L21D6R901 530 aa24.33■■□□□ 1.49
PSEN1-225ENST00000560005 ARVCFO00192 962 aa24.33■■□□□ 1.49
PSEN1-225ENST00000560005 SDSP20132 328 aa24.33■■□□□ 1.49
PSEN1-225ENST00000560005 ACVR2BQ13705 512 aa24.33■■□□□ 1.49
PSEN1-225ENST00000560005 RAB30Q15771 203 aa24.33■■□□□ 1.49
PSEN1-225ENST00000560005 AMOTL1Q8IY63 956 aa24.33■■□□□ 1.49
PSEN1-225ENST00000560005 NUP88Q99567 741 aaPredicted RBP24.33■■□□□ 1.49
PSEN1-225ENST00000560005 SPC25Q9HBM1 224 aa24.33■■□□□ 1.49
PSEN1-225ENST00000560005 CXXC1Q9P0U4 656 aaPredicted RBP24.33■■□□□ 1.49
PSEN1-225ENST00000560005 CYP2C18P33260 490 aa24.32■■□□□ 1.48
PSEN1-225ENST00000560005 SLC4A3P48751 1232 aa24.32■■□□□ 1.48
PSEN1-225ENST00000560005 SLF1Q9BQI6 1058 aa24.32■■□□□ 1.48
PSEN1-225ENST00000560005 NKX2-4Q9H2Z4 354 aa24.32■■□□□ 1.48
PSEN1-225ENST00000560005 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.32■■□□□ 1.48
PSEN1-225ENST00000560005 TRIM6-TRIM34B2RNG4 842 aa24.31■■□□□ 1.48
PSEN1-225ENST00000560005 TLR3O15455 904 aaKnown RBP24.31■■□□□ 1.48
PSEN1-225ENST00000560005 GJA9P57773 515 aa24.31■■□□□ 1.48
PSEN1-225ENST00000560005 CCDC144BQ3MJ40 725 aa24.31■■□□□ 1.48
PSEN1-225ENST00000560005 GNASQ5JWF2 1037 aa24.31■■□□□ 1.48
PSEN1-225ENST00000560005 ZNF467Q7Z7K2 595 aaPredicted RBP24.31■■□□□ 1.48
PSEN1-225ENST00000560005 PI4K2BQ8TCG2 481 aa24.31■■□□□ 1.48
PSEN1-225ENST00000560005 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.31■■□□□ 1.48
PSEN1-225ENST00000560005 HERVK_113Q902F9 699 aa24.31■■□□□ 1.48
PSEN1-225ENST00000560005 FAM122AQ96E09 287 aa24.31■■□□□ 1.48
PSEN1-225ENST00000560005 UPF3AQ9H1J1 476 aaKnown RBP24.31■■□□□ 1.48
PSEN1-225ENST00000560005 IL23AQ9NPF7 189 aa24.31■■□□□ 1.48
PSEN1-225ENST00000560005 ADD2P35612 726 aa24.3■■□□□ 1.48
PSEN1-225ENST00000560005 NECAB3Q96P71 396 aaPredicted RBP24.3■■□□□ 1.48
PSEN1-225ENST00000560005 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.3■■□□□ 1.48
PSEN1-225ENST00000560005 ABHD16BQ9H3Z7 469 aa24.3■■□□□ 1.48
PSEN1-225ENST00000560005 SLC28A3Q9HAS3 691 aa24.3■■□□□ 1.48
PSEN1-225ENST00000560005 YBX2Q9Y2T7 364 aaKnown RBP24.3■■□□□ 1.48
PSEN1-225ENST00000560005 MCM3APO60318 1980 aa24.29■■□□□ 1.48
PSEN1-225ENST00000560005 ATP5JP18859 108 aa24.29■■□□□ 1.48
PSEN1-225ENST00000560005 TICAM2Q86XR7 235 aa24.29■■□□□ 1.48
PSEN1-225ENST00000560005 CPXCR1Q8N123 301 aa24.29■■□□□ 1.48
PSEN1-225ENST00000560005 MTIF3Q9H2K0 278 aaKnown RBP24.29■■□□□ 1.48
PSEN1-225ENST00000560005 GBF1Q92538 1859 aa24.29■■□□□ 1.48
PSEN1-225ENST00000560005 CD4P01730 458 aa24.28■■□□□ 1.48
PSEN1-225ENST00000560005 ANP32AP39687 249 aaKnown RBP24.28■■□□□ 1.48
PSEN1-225ENST00000560005 DDRGK1Q96HY6 314 aa24.28■■□□□ 1.48
PSEN1-225ENST00000560005 FGD4Q96M96 766 aa24.28■■□□□ 1.48
PSEN1-225ENST00000560005 FGBP02675 491 aa24.27■■□□□ 1.48
PSEN1-225ENST00000560005 CHGBP05060 677 aa24.27■■□□□ 1.48
PSEN1-225ENST00000560005 ARMCX2Q7L311 632 aa24.27■■□□□ 1.48
PSEN1-225ENST00000560005 OTOP2Q7RTS6 562 aa24.27■■□□□ 1.48
PSEN1-225ENST00000560005 ANKRD35Q8N283 1001 aa24.27■■□□□ 1.48
PSEN1-225ENST00000560005 RILPL2Q969X0 211 aa24.27■■□□□ 1.48
PSEN1-225ENST00000560005 EVI5LQ96CN4 794 aa24.27■■□□□ 1.48
PSEN1-225ENST00000560005 PAG1Q9NWQ8 432 aa24.27■■□□□ 1.48
PSEN1-225ENST00000560005 TCF20Q9UGU0 1960 aaKnown RBP24.26■■□□□ 1.47
PSEN1-225ENST00000560005 CTAGE5O15320 804 aa24.26■■□□□ 1.47
PSEN1-225ENST00000560005 NDUFB10O96000 172 aa24.26■■□□□ 1.47
PSEN1-225ENST00000560005 BEX3Q00994 111 aa24.26■■□□□ 1.47
PSEN1-225ENST00000560005 CTR9Q6PD62 1173 aa24.26■■□□□ 1.47
PSEN1-225ENST00000560005 MICALL1Q8N3F8 863 aa24.26■■□□□ 1.47
PSEN1-225ENST00000560005 PRPF38AQ8NAV1 312 aaKnown RBP24.26■■□□□ 1.47
PSEN1-225ENST00000560005 TSPYL2Q9H2G4 693 aaPredicted RBP24.26■■□□□ 1.47
PSEN1-225ENST00000560005 HIPK3Q9H422 1215 aa24.26■■□□□ 1.47
PSEN1-225ENST00000560005 SLC4A4Q9Y6R1 1079 aa24.26■■□□□ 1.47
PSEN1-225ENST00000560005 UMODL1Q5DID0 1318 aa24.26■■□□□ 1.47
PSEN1-225ENST00000560005 F5H6K3 240 aa24.25■■□□□ 1.47
PSEN1-225ENST00000560005 HIP1O00291 1037 aa24.25■■□□□ 1.47
PSEN1-225ENST00000560005 ATP2A1O14983 1001 aa24.25■■□□□ 1.47
PSEN1-225ENST00000560005 RABGGTBP53611 331 aa24.25■■□□□ 1.47
PSEN1-225ENST00000560005 KLRC3Q07444 240 aa24.25■■□□□ 1.47
PSEN1-225ENST00000560005 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.25■■□□□ 1.47
PSEN1-225ENST00000560005 BOLA2Q9H3K6 86 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms