RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 STAT2P52630 851 aa10.9□□□□□ -0.66
HDDC3-204ENST00000559834 GJA9P57773 515 aa10.9□□□□□ -0.66
HDDC3-204ENST00000559834 TFAP4Q01664 338 aa10.9□□□□□ -0.66
HDDC3-204ENST00000559834 IKQ13123 557 aaPredicted RBP10.9□□□□□ -0.66
HDDC3-204ENST00000559834 TKFCQ3LXA3 575 aa10.9□□□□□ -0.66
HDDC3-204ENST00000559834 CCDC144BQ3MJ40 725 aa10.9□□□□□ -0.66
HDDC3-204ENST00000559834 MFSD5Q6N075 450 aa10.9□□□□□ -0.66
HDDC3-204ENST00000559834 NOL8Q76FK4 1167 aaKnown RBP10.9□□□□□ -0.66
HDDC3-204ENST00000559834 ARMCX2Q7L311 632 aa10.9□□□□□ -0.66
HDDC3-204ENST00000559834 STAG1Q8WVM7 1258 aa10.9□□□□□ -0.66
HDDC3-204ENST00000559834 LENG1Q96BZ8 264 aaPredicted RBP10.9□□□□□ -0.66
HDDC3-204ENST00000559834 NAPBQ9H115 298 aa10.9□□□□□ -0.66
HDDC3-204ENST00000559834 TTYH1Q9H313 450 aaPredicted RBP10.9□□□□□ -0.66
HDDC3-204ENST00000559834 ACAD9Q9H845 621 aa10.9□□□□□ -0.66
HDDC3-204ENST00000559834 EPB41L4AQ9HCS5 686 aaPredicted RBP10.9□□□□□ -0.66
HDDC3-204ENST00000559834 LAMA3Q16787 3333 aa10.89□□□□□ -0.67
HDDC3-204ENST00000559834 A0A0U1RQG5 324 aaPredicted RBP10.89□□□□□ -0.67
HDDC3-204ENST00000559834 ASB14A6NK59 587 aa10.89□□□□□ -0.67
HDDC3-204ENST00000559834 M0R2C6 588 aa10.89□□□□□ -0.67
HDDC3-204ENST00000559834 ARVCFO00192 962 aa10.89□□□□□ -0.67
HDDC3-204ENST00000559834 ASGR1P07306 291 aa10.89□□□□□ -0.67
HDDC3-204ENST00000559834 CDK7P50613 346 aa10.89□□□□□ -0.67
HDDC3-204ENST00000559834 EPHB4P54760 987 aa10.89□□□□□ -0.67
HDDC3-204ENST00000559834 PPIGQ13427 754 aaKnown RBP eCLIP10.89□□□□□ -0.67
HDDC3-204ENST00000559834 TSHZ3Q63HK5 1081 aa10.89□□□□□ -0.67
HDDC3-204ENST00000559834 CCDC129Q6ZRS4 1044 aa10.89□□□□□ -0.67
HDDC3-204ENST00000559834 CCDC144CPQ8IYA2 1237 aa10.89□□□□□ -0.67
HDDC3-204ENST00000559834 LRRC47Q8N1G4 583 aaKnown RBP10.89□□□□□ -0.67
HDDC3-204ENST00000559834 TMEM199Q8N511 208 aa10.89□□□□□ -0.67
HDDC3-204ENST00000559834 MYLIPQ8WY64 445 aa10.89□□□□□ -0.67
HDDC3-204ENST00000559834 GMCL1Q96IK5 515 aa10.89□□□□□ -0.67
HDDC3-204ENST00000559834 FSD1Q9BTV5 496 aa10.89□□□□□ -0.67
HDDC3-204ENST00000559834 UPF3AQ9H1J1 476 aaKnown RBP10.89□□□□□ -0.67
HDDC3-204ENST00000559834 HOMER2Q9NSB8 354 aa10.89□□□□□ -0.67
HDDC3-204ENST00000559834 ZBTB47Q9UFB7 747 aaPredicted RBP10.89□□□□□ -0.67
HDDC3-204ENST00000559834 COL11A1P12107 1806 aaPredicted RBP10.88□□□□□ -0.67
HDDC3-204ENST00000559834 LTBP2Q14767 1821 aa10.88□□□□□ -0.67
HDDC3-204ENST00000559834 PARP14Q460N5 1801 aa10.88□□□□□ -0.67
HDDC3-204ENST00000559834 TSPY2A6NKD2 308 aa10.88□□□□□ -0.67
HDDC3-204ENST00000559834 ZEB2O60315 1214 aa10.88□□□□□ -0.67
HDDC3-204ENST00000559834 PLA2G6O60733 806 aa10.88□□□□□ -0.67
HDDC3-204ENST00000559834 CABYRO75952 493 aa10.88□□□□□ -0.67
HDDC3-204ENST00000559834 MCCP23508 829 aa10.88□□□□□ -0.67
HDDC3-204ENST00000559834 NKX3-2P78367 333 aa10.88□□□□□ -0.67
HDDC3-204ENST00000559834 TNFAIP2Q03169 654 aa10.88□□□□□ -0.67
HDDC3-204ENST00000559834 PPARAQ07869 468 aa10.88□□□□□ -0.67
HDDC3-204ENST00000559834 RCSD1Q6JBY9 416 aa10.88□□□□□ -0.67
HDDC3-204ENST00000559834 FAM133AQ8N9E0 248 aa10.88□□□□□ -0.67
HDDC3-204ENST00000559834 SYMPKQ92797 1274 aaKnown RBP10.88□□□□□ -0.67
HDDC3-204ENST00000559834 TRERF1Q96PN7 1200 aa10.88□□□□□ -0.67
HDDC3-204ENST00000559834 SEZ6LQ9BYH1 1024 aa10.88□□□□□ -0.67
HDDC3-204ENST00000559834 AP5M1Q9H0R1 490 aa10.88□□□□□ -0.67
HDDC3-204ENST00000559834 TBX21Q9UL17 535 aa10.88□□□□□ -0.67
HDDC3-204ENST00000559834 MYH7P12883 1935 aa10.88□□□□□ -0.67
HDDC3-204ENST00000559834 PLXNA1Q9UIW2 1896 aa10.87□□□□□ -0.67
HDDC3-204ENST00000559834 MYADML2A6NDP7 307 aa10.87□□□□□ -0.67
HDDC3-204ENST00000559834 DNAJB2P25686 324 aa10.87□□□□□ -0.67
HDDC3-204ENST00000559834 CNTN2Q02246 1040 aa10.87□□□□□ -0.67
HDDC3-204ENST00000559834 ZMYM1Q5SVZ6 1142 aa10.87□□□□□ -0.67
HDDC3-204ENST00000559834 IQSEC1Q6DN90 963 aa10.87□□□□□ -0.67
HDDC3-204ENST00000559834 TIFAQ96CG3 184 aa10.87□□□□□ -0.67
HDDC3-204ENST00000559834 FGD4Q96M96 766 aa10.87□□□□□ -0.67
HDDC3-204ENST00000559834 AGBL1Q96MI9 1066 aa10.87□□□□□ -0.67
HDDC3-204ENST00000559834 SEC62Q99442 399 aaKnown RBP10.87□□□□□ -0.67
HDDC3-204ENST00000559834 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.87□□□□□ -0.67
HDDC3-204ENST00000559834 ZNF576Q9H609 170 aa10.87□□□□□ -0.67
HDDC3-204ENST00000559834 RNF146Q9NTX7 359 aa10.87□□□□□ -0.67
HDDC3-204ENST00000559834 STX8Q9UNK0 236 aa10.87□□□□□ -0.67
HDDC3-204ENST00000559834 PLIN4Q96Q06 1357 aa10.87□□□□□ -0.67
HDDC3-204ENST00000559834 ALAS1P13196 640 aa10.86□□□□□ -0.67
HDDC3-204ENST00000559834 CSF2RAP15509 400 aa10.86□□□□□ -0.67
HDDC3-204ENST00000559834 TMEM240Q5SV17 173 aa10.86□□□□□ -0.67
HDDC3-204ENST00000559834 PSRC1Q6PGN9 363 aaPredicted RBP10.86□□□□□ -0.67
HDDC3-204ENST00000559834 FAM126BQ8IXS8 530 aa10.86□□□□□ -0.67
HDDC3-204ENST00000559834 MTIF3Q9H2K0 278 aaKnown RBP10.86□□□□□ -0.67
HDDC3-204ENST00000559834 A1CFQ9NQ94 594 aaKnown RBP10.86□□□□□ -0.67
HDDC3-204ENST00000559834 Q9Y3F1 56 aa10.86□□□□□ -0.67
HDDC3-204ENST00000559834 ZNF536O15090 1300 aa10.85□□□□□ -0.67
HDDC3-204ENST00000559834 SOWAHBA6NEL2 793 aa10.85□□□□□ -0.67
HDDC3-204ENST00000559834 DYNC1LI2O43237 492 aaPredicted RBP10.85□□□□□ -0.67
HDDC3-204ENST00000559834 ADCY6O43306 1168 aa10.85□□□□□ -0.67
HDDC3-204ENST00000559834 MX1P20591 662 aa10.85□□□□□ -0.67
HDDC3-204ENST00000559834 IRX5P78411 483 aaPredicted RBP10.85□□□□□ -0.67
HDDC3-204ENST00000559834 BEX3Q00994 111 aa10.85□□□□□ -0.67
HDDC3-204ENST00000559834 ITGA7Q13683 1181 aa10.85□□□□□ -0.67
HDDC3-204ENST00000559834 GRIN2CQ14957 1233 aa10.85□□□□□ -0.67
HDDC3-204ENST00000559834 FSCN1Q16658 493 aaKnown RBP10.85□□□□□ -0.67
HDDC3-204ENST00000559834 ZNF365Q70YC5 407 aa10.85□□□□□ -0.67
HDDC3-204ENST00000559834 TLK2Q86UE8 772 aa10.85□□□□□ -0.67
HDDC3-204ENST00000559834 PI4K2BQ8TCG2 481 aa10.85□□□□□ -0.67
HDDC3-204ENST00000559834 GAS2L1Q99501 681 aaPredicted RBP10.85□□□□□ -0.67
HDDC3-204ENST00000559834 PPP1R12CQ9BZL4 782 aa10.85□□□□□ -0.67
HDDC3-204ENST00000559834 KATNBL1Q9H079 304 aa10.85□□□□□ -0.67
HDDC3-204ENST00000559834 MSRAQ9UJ68 235 aa10.85□□□□□ -0.67
HDDC3-204ENST00000559834 PNMA2Q9UL42 364 aa10.85□□□□□ -0.67
HDDC3-204ENST00000559834 PRR12Q9ULL5 1215 aa10.85□□□□□ -0.67
HDDC3-204ENST00000559834 GNEQ9Y223 722 aaKnown RBP10.85□□□□□ -0.67
HDDC3-204ENST00000559834 GREB1LQ9C091 1923 aaPredicted RBP10.85□□□□□ -0.67
HDDC3-204ENST00000559834 COL6A3P12111 3177 aa10.84□□□□□ -0.67
HDDC3-204ENST00000559834 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms