RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 SYNPO2Q9UMS6 1093 aa13.26□□□□□ -0.29
HERC1-204ENST00000559715 MOXD2PA6NHM9 499 aa13.25□□□□□ -0.29
HERC1-204ENST00000559715 PATL2C9JE40 543 aaKnown RBP13.25□□□□□ -0.29
HERC1-204ENST00000559715 TIMP1P01033 207 aa13.25□□□□□ -0.29
HERC1-204ENST00000559715 ATXN8OSP0DMR3 200 aa13.25□□□□□ -0.29
HERC1-204ENST00000559715 RAG1P15918 1043 aa13.25□□□□□ -0.29
HERC1-204ENST00000559715 GJA9P57773 515 aa13.25□□□□□ -0.29
HERC1-204ENST00000559715 CNTN2Q02246 1040 aa13.25□□□□□ -0.29
HERC1-204ENST00000559715 GRIN2CQ14957 1233 aa13.25□□□□□ -0.29
HERC1-204ENST00000559715 CCDC144BQ3MJ40 725 aa13.25□□□□□ -0.29
HERC1-204ENST00000559715 NEDD1Q8NHV4 660 aa13.25□□□□□ -0.29
HERC1-204ENST00000559715 MAFAQ8NHW3 353 aaPredicted RBP13.25□□□□□ -0.29
HERC1-204ENST00000559715 VWCEQ96DN2 955 aa13.25□□□□□ -0.29
HERC1-204ENST00000559715 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.25□□□□□ -0.29
HERC1-204ENST00000559715 MKNK2Q9HBH9 465 aa13.25□□□□□ -0.29
HERC1-204ENST00000559715 TMEM39AQ9NV64 488 aa13.25□□□□□ -0.29
HERC1-204ENST00000559715 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.25□□□□□ -0.29
HERC1-204ENST00000559715 FAM184BQ9ULE4 1060 aa13.25□□□□□ -0.29
HERC1-204ENST00000559715 CNPY2Q9Y2B0 182 aa13.25□□□□□ -0.29
HERC1-204ENST00000559715 DDX49Q9Y6V7 483 aaKnown RBP13.25□□□□□ -0.29
HERC1-204ENST00000559715 GRIN2DO15399 1336 aa13.24□□□□□ -0.29
HERC1-204ENST00000559715 ELP1O95163 1332 aa13.24□□□□□ -0.29
HERC1-204ENST00000559715 SALL3Q9BXA9 1300 aa13.24□□□□□ -0.29
HERC1-204ENST00000559715 SOWAHBA6NEL2 793 aa13.24□□□□□ -0.29
HERC1-204ENST00000559715 RAD21O60216 631 aa13.24□□□□□ -0.29
HERC1-204ENST00000559715 ASGR1P07306 291 aa13.24□□□□□ -0.29
HERC1-204ENST00000559715 PTGS1P23219 599 aa13.24□□□□□ -0.29
HERC1-204ENST00000559715 NOVP48745 357 aa13.24□□□□□ -0.29
HERC1-204ENST00000559715 OAZ1P54368 228 aa13.24□□□□□ -0.29
HERC1-204ENST00000559715 FPGSQ05932 587 aa13.24□□□□□ -0.29
HERC1-204ENST00000559715 TMEM63BQ5T3F8 832 aa13.24□□□□□ -0.29
HERC1-204ENST00000559715 LRRC47Q8N1G4 583 aaKnown RBP13.24□□□□□ -0.29
HERC1-204ENST00000559715 USP38Q8NB14 1042 aa13.24□□□□□ -0.29
HERC1-204ENST00000559715 SLC43A3Q8NBI5 491 aa13.24□□□□□ -0.29
HERC1-204ENST00000559715 KIFC2Q96AC6 838 aa13.24□□□□□ -0.29
HERC1-204ENST00000559715 DDX11Q96FC9 970 aa13.24□□□□□ -0.29
HERC1-204ENST00000559715 RNPC3Q96LT9 517 aaKnown RBP13.24□□□□□ -0.29
HERC1-204ENST00000559715 ABHD16BQ9H3Z7 469 aa13.24□□□□□ -0.29
HERC1-204ENST00000559715 CHMP4BQ9H444 224 aaKnown RBP13.24□□□□□ -0.29
HERC1-204ENST00000559715 INCENPQ9NQS7 918 aa13.24□□□□□ -0.29
HERC1-204ENST00000559715 STARD7Q9NQZ5 370 aa13.24□□□□□ -0.29
HERC1-204ENST00000559715 IL17RBQ9NRM6 502 aa13.24□□□□□ -0.29
HERC1-204ENST00000559715 FEM1BQ9UK73 627 aa13.24□□□□□ -0.29
HERC1-204ENST00000559715 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.24□□□□□ -0.29
HERC1-204ENST00000559715 TMEM265A0A087WTH1 108 aa13.23□□□□□ -0.29
HERC1-204ENST00000559715 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.23□□□□□ -0.29
HERC1-204ENST00000559715 TTLL1O95922 423 aa13.23□□□□□ -0.29
HERC1-204ENST00000559715 CD4P01730 458 aa13.23□□□□□ -0.29
HERC1-204ENST00000559715 ZFYP08048 801 aaPredicted RBP13.23□□□□□ -0.29
HERC1-204ENST00000559715 TMEM240Q5SV17 173 aa13.23□□□□□ -0.29
HERC1-204ENST00000559715 ZMYM1Q5SVZ6 1142 aa13.23□□□□□ -0.29
HERC1-204ENST00000559715 MFSD5Q6N075 450 aa13.23□□□□□ -0.29
HERC1-204ENST00000559715 ARMCX2Q7L311 632 aa13.23□□□□□ -0.29
HERC1-204ENST00000559715 RASGRP2Q7LDG7 609 aa13.23□□□□□ -0.29
HERC1-204ENST00000559715 FAM126BQ8IXS8 530 aa13.23□□□□□ -0.29
HERC1-204ENST00000559715 CCDC144CPQ8IYA2 1237 aa13.23□□□□□ -0.29
HERC1-204ENST00000559715 CHST13Q8NET6 341 aa13.23□□□□□ -0.29
HERC1-204ENST00000559715 NUP133Q8WUM0 1156 aa13.23□□□□□ -0.29
HERC1-204ENST00000559715 ZHX1Q9UKY1 873 aaPredicted RBP13.23□□□□□ -0.29
HERC1-204ENST00000559715 GNEQ9Y223 722 aaKnown RBP13.23□□□□□ -0.29
HERC1-204ENST00000559715 PCDHB15Q9Y5E8 787 aa13.23□□□□□ -0.29
HERC1-204ENST00000559715 DCDC2CA8MYV0 355 aa13.22□□□□□ -0.29
HERC1-204ENST00000559715 ARVCFO00192 962 aa13.22□□□□□ -0.29
HERC1-204ENST00000559715 ZBED4O75132 1171 aa13.22□□□□□ -0.29
HERC1-204ENST00000559715 BMP3P12645 472 aa13.22□□□□□ -0.29
HERC1-204ENST00000559715 GNAT2P19087 354 aa13.22□□□□□ -0.29
HERC1-204ENST00000559715 DNAJB2P25686 324 aa13.22□□□□□ -0.29
HERC1-204ENST00000559715 SLFN13Q68D06 897 aa13.22□□□□□ -0.29
HERC1-204ENST00000559715 ZNF444Q8N0Y2 327 aaPredicted RBP13.22□□□□□ -0.29
HERC1-204ENST00000559715 AGBL1Q96MI9 1066 aa13.22□□□□□ -0.29
HERC1-204ENST00000559715 A1CFQ9NQ94 594 aaKnown RBP13.22□□□□□ -0.29
HERC1-204ENST00000559715 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.21□□□□□ -0.29
HERC1-204ENST00000559715 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.21□□□□□ -0.29
HERC1-204ENST00000559715 GRXCR1A8MXD5 290 aa13.21□□□□□ -0.29
HERC1-204ENST00000559715 TMEM232C9JQI7 657 aa13.21□□□□□ -0.29
HERC1-204ENST00000559715 PLA2G6O60733 806 aa13.21□□□□□ -0.29
HERC1-204ENST00000559715 C6orf222P0C671 652 aaPredicted RBP13.21□□□□□ -0.29
HERC1-204ENST00000559715 CSF2RAP15509 400 aa13.21□□□□□ -0.29
HERC1-204ENST00000559715 PBX2P40425 430 aa13.21□□□□□ -0.29
HERC1-204ENST00000559715 SLC4A3P48751 1232 aa13.21□□□□□ -0.29
HERC1-204ENST00000559715 TFAP4Q01664 338 aa13.21□□□□□ -0.29
HERC1-204ENST00000559715 TAPT1Q6NXT6 567 aa13.21□□□□□ -0.29
HERC1-204ENST00000559715 ANKRD35Q8N283 1001 aa13.21□□□□□ -0.29
HERC1-204ENST00000559715 GMCL1Q96IK5 515 aa13.21□□□□□ -0.29
HERC1-204ENST00000559715 FBXO40Q9UH90 709 aa13.21□□□□□ -0.29
HERC1-204ENST00000559715 UMODL1Q5DID0 1318 aa13.2□□□□□ -0.3
HERC1-204ENST00000559715 TTC41PQ6P2S7 1318 aa13.2□□□□□ -0.3
HERC1-204ENST00000559715 NMT2O60551 498 aa13.2□□□□□ -0.3
HERC1-204ENST00000559715 FGRP09769 529 aa13.2□□□□□ -0.3
HERC1-204ENST00000559715 TDO2P48775 406 aa13.2□□□□□ -0.3
HERC1-204ENST00000559715 BEX3Q00994 111 aa13.2□□□□□ -0.3
HERC1-204ENST00000559715 PPARAQ07869 468 aa13.2□□□□□ -0.3
HERC1-204ENST00000559715 MUM1L1Q5H9M0 696 aa13.2□□□□□ -0.3
HERC1-204ENST00000559715 GNASQ5JWF2 1037 aa13.2□□□□□ -0.3
HERC1-204ENST00000559715 PCSK9Q8NBP7 692 aaKnown RBP13.2□□□□□ -0.3
HERC1-204ENST00000559715 STAG1Q8WVM7 1258 aa13.2□□□□□ -0.3
HERC1-204ENST00000559715 GLT1D1Q96MS3 346 aa13.2□□□□□ -0.3
HERC1-204ENST00000559715 PURBQ96QR8 312 aaKnown RBP13.2□□□□□ -0.3
HERC1-204ENST00000559715 PBX4Q9BYU1 374 aa13.2□□□□□ -0.3
HERC1-204ENST00000559715 ZNF576Q9H609 170 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms