RNA–Protein interactions for RNA: ENST00000559604.1

KNSTRN-208, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 4

Gene KNSTRN, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-208ENST00000559604 ZNF467Q7Z7K2 595 aaPredicted RBP22.56■■□□□ 1.2
KNSTRN-208ENST00000559604 LENG1Q96BZ8 264 aaPredicted RBP22.56■■□□□ 1.2
KNSTRN-208ENST00000559604 LRCH3Q96II8 777 aa22.56■■□□□ 1.2
KNSTRN-208ENST00000559604 AGBL1Q96MI9 1066 aa22.56■■□□□ 1.2
KNSTRN-208ENST00000559604 UBE2OQ9C0C9 1292 aaKnown RBP22.56■■□□□ 1.2
KNSTRN-208ENST00000559604 HOMER2Q9NSB8 354 aa22.56■■□□□ 1.2
KNSTRN-208ENST00000559604 PGK1P00558 417 aa22.55■■□□□ 1.2
KNSTRN-208ENST00000559604 MDM2Q00987 491 aaPredicted RBP22.55■■□□□ 1.2
KNSTRN-208ENST00000559604 SNX17Q15036 470 aa22.55■■□□□ 1.2
KNSTRN-208ENST00000559604 FERMT2Q96AC1 680 aa22.55■■□□□ 1.2
KNSTRN-208ENST00000559604 TCP11L1Q9NUJ3 509 aa22.55■■□□□ 1.2
KNSTRN-208ENST00000559604 PRR12Q9ULL5 1215 aa22.55■■□□□ 1.2
KNSTRN-208ENST00000559604 PHF24Q9UPV7 400 aa22.55■■□□□ 1.2
KNSTRN-208ENST00000559604 MTMR7Q9Y216 660 aa22.55■■□□□ 1.2
KNSTRN-208ENST00000559604 ATP11BQ9Y2G3 1177 aa22.55■■□□□ 1.2
KNSTRN-208ENST00000559604 SUPT16HQ9Y5B9 1047 aaKnown RBP22.55■■□□□ 1.2
KNSTRN-208ENST00000559604 LTBP2Q14767 1821 aa22.54■■□□□ 1.2
KNSTRN-208ENST00000559604 SNAP25P60880 206 aa22.54■■□□□ 1.2
KNSTRN-208ENST00000559604 TBC1D10CQ8IV04 446 aa22.54■■□□□ 1.2
KNSTRN-208ENST00000559604 TDHQ8IZJ6 230 aa22.54■■□□□ 1.2
KNSTRN-208ENST00000559604 TMEM47Q9BQJ4 181 aa22.54■■□□□ 1.2
KNSTRN-208ENST00000559604 ACAD9Q9H845 621 aa22.54■■□□□ 1.2
KNSTRN-208ENST00000559604 RNF146Q9NTX7 359 aa22.54■■□□□ 1.2
KNSTRN-208ENST00000559604 LAMA4Q16363 1823 aa22.54■■□□□ 1.2
KNSTRN-208ENST00000559604 ADAMTS4O75173 837 aa22.53■■□□□ 1.2
KNSTRN-208ENST00000559604 MFAP1P55081 439 aaKnown RBP22.53■■□□□ 1.2
KNSTRN-208ENST00000559604 CNTN2Q02246 1040 aa22.53■■□□□ 1.2
KNSTRN-208ENST00000559604 TRIM60Q495X7 471 aa22.53■■□□□ 1.2
KNSTRN-208ENST00000559604 AKNAD1Q5T1N1 836 aa22.53■■□□□ 1.2
KNSTRN-208ENST00000559604 CCDC174Q6PII3 467 aa22.53■■□□□ 1.2
KNSTRN-208ENST00000559604 RNF180Q86T96 592 aa22.53■■□□□ 1.2
KNSTRN-208ENST00000559604 DCAF4Q8WV16 495 aa22.53■■□□□ 1.2
KNSTRN-208ENST00000559604 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.53■■□□□ 1.2
KNSTRN-208ENST00000559604 ZHX1Q9UKY1 873 aaPredicted RBP22.53■■□□□ 1.2
KNSTRN-208ENST00000559604 TOP1P11387 765 aaKnown RBP22.52■■□□□ 1.2
KNSTRN-208ENST00000559604 CCDC96Q2M329 555 aa22.52■■□□□ 1.2
KNSTRN-208ENST00000559604 TKFCQ3LXA3 575 aa22.52■■□□□ 1.2
KNSTRN-208ENST00000559604 C1orf53Q5VUE5 145 aa22.52■■□□□ 1.2
KNSTRN-208ENST00000559604 TTBK2Q6IQ55 1244 aa22.52■■□□□ 1.2
KNSTRN-208ENST00000559604 CWC27Q6UX04 472 aaKnown RBP22.52■■□□□ 1.2
KNSTRN-208ENST00000559604 FAM133AQ8N9E0 248 aa22.52■■□□□ 1.2
KNSTRN-208ENST00000559604 TRERF1Q96PN7 1200 aa22.52■■□□□ 1.2
KNSTRN-208ENST00000559604 A1CFQ9NQ94 594 aaKnown RBP22.52■■□□□ 1.2
KNSTRN-208ENST00000559604 FAM184BQ9ULE4 1060 aa22.52■■□□□ 1.2
KNSTRN-208ENST00000559604 PCP11498 1178 aaKnown RBP22.51■■□□□ 1.19
KNSTRN-208ENST00000559604 ALAS1P13196 640 aa22.51■■□□□ 1.19
KNSTRN-208ENST00000559604 ACVR2BQ13705 512 aa22.51■■□□□ 1.19
KNSTRN-208ENST00000559604 LRIT3Q3SXY7 679 aa22.51■■□□□ 1.19
KNSTRN-208ENST00000559604 MFSD6Q6ZSS7 791 aa22.51■■□□□ 1.19
KNSTRN-208ENST00000559604 ARMCX2Q7L311 632 aa22.51■■□□□ 1.19
KNSTRN-208ENST00000559604 DIAPH3Q9NSV4 1193 aa22.51■■□□□ 1.19
KNSTRN-208ENST00000559604 SYNRGQ9UMZ2 1314 aa22.51■■□□□ 1.19
KNSTRN-208ENST00000559604 POTEB2H3BUK9 544 aa22.5■■□□□ 1.19
KNSTRN-208ENST00000559604 ADCY6O43306 1168 aa22.5■■□□□ 1.19
KNSTRN-208ENST00000559604 BTNL9Q6UXG8 535 aa22.5■■□□□ 1.19
KNSTRN-208ENST00000559604 CCDC144CPQ8IYA2 1237 aa22.5■■□□□ 1.19
KNSTRN-208ENST00000559604 KATNBL1Q9H079 304 aa22.5■■□□□ 1.19
KNSTRN-208ENST00000559604 ABHD16BQ9H3Z7 469 aa22.5■■□□□ 1.19
KNSTRN-208ENST00000559604 PRKAG2Q9UGJ0 569 aa22.5■■□□□ 1.19
KNSTRN-208ENST00000559604 LCTP09848 1927 aa22.5■■□□□ 1.19
KNSTRN-208ENST00000559604 A0A1W2PQ45 241 aaPredicted RBP22.49■■□□□ 1.19
KNSTRN-208ENST00000559604 A0A1W2PQY0 241 aa22.49■■□□□ 1.19
KNSTRN-208ENST00000559604 SOWAHBA6NEL2 793 aa22.49■■□□□ 1.19
KNSTRN-208ENST00000559604 SLC16A2P36021 539 aa22.49■■□□□ 1.19
KNSTRN-208ENST00000559604 MUM1L1Q5H9M0 696 aa22.49■■□□□ 1.19
KNSTRN-208ENST00000559604 KLHDC9Q8NEP7 349 aa22.49■■□□□ 1.19
KNSTRN-208ENST00000559604 LBHD1Q9BQE6 289 aaPredicted RBP22.49■■□□□ 1.19
KNSTRN-208ENST00000559604 TSEN34Q9BSV6 310 aaKnown RBP22.49■■□□□ 1.19
KNSTRN-208ENST00000559604 RANBP17Q9H2T7 1088 aaKnown RBP22.49■■□□□ 1.19
KNSTRN-208ENST00000559604 NEDD4P46934 1319 aa22.49■■□□□ 1.19
KNSTRN-208ENST00000559604 HIP1O00291 1037 aa22.48■■□□□ 1.19
KNSTRN-208ENST00000559604 ZNF213O14771 459 aa22.48■■□□□ 1.19
KNSTRN-208ENST00000559604 DUSP11O75319 330 aaKnown RBP22.48■■□□□ 1.19
KNSTRN-208ENST00000559604 TLE2Q04725 743 aa22.48■■□□□ 1.19
KNSTRN-208ENST00000559604 CCDC144BQ3MJ40 725 aa22.48■■□□□ 1.19
KNSTRN-208ENST00000559604 TTC14Q96N46 770 aa22.48■■□□□ 1.19
KNSTRN-208ENST00000559604 RNF41Q9H4P4 317 aaPredicted RBP22.48■■□□□ 1.19
KNSTRN-208ENST00000559604 GPCPD1Q9NPB8 672 aa22.48■■□□□ 1.19
KNSTRN-208ENST00000559604 PRDM5Q9NQX1 630 aaPredicted RBP22.48■■□□□ 1.19
KNSTRN-208ENST00000559604 PDLIM7Q9NR12 457 aa22.48■■□□□ 1.19
KNSTRN-208ENST00000559604 CCPG1Q9ULG6 757 aa22.48■■□□□ 1.19
KNSTRN-208ENST00000559604 FRMPD2Q68DX3 1309 aaPredicted RBP22.48■■□□□ 1.19
KNSTRN-208ENST00000559604 LRRC37A2A6NM11 1700 aa22.48■■□□□ 1.19
KNSTRN-208ENST00000559604 MYADML2A6NDP7 307 aa22.47■■□□□ 1.19
KNSTRN-208ENST00000559604 ICAM1P05362 532 aa22.47■■□□□ 1.19
KNSTRN-208ENST00000559604 PDHBP11177 359 aa22.47■■□□□ 1.19
KNSTRN-208ENST00000559604 PDE4AP27815 886 aa22.47■■□□□ 1.19
KNSTRN-208ENST00000559604 ACLYP53396 1101 aa22.47■■□□□ 1.19
KNSTRN-208ENST00000559604 IRX5P78411 483 aaPredicted RBP22.47■■□□□ 1.19
KNSTRN-208ENST00000559604 SYDE2Q5VT97 1194 aa22.47■■□□□ 1.19
KNSTRN-208ENST00000559604 CCSAPQ6IQ19 270 aaPredicted RBP22.47■■□□□ 1.19
KNSTRN-208ENST00000559604 SH3RF1Q7Z6J0 888 aa22.47■■□□□ 1.19
KNSTRN-208ENST00000559604 CYP39A1Q9NYL5 469 aa22.47■■□□□ 1.19
KNSTRN-208ENST00000559604 ASTN1O14525 1302 aa22.47■■□□□ 1.19
KNSTRN-208ENST00000559604 TRIM43BA6NCK2 446 aa22.46■■□□□ 1.19
KNSTRN-208ENST00000559604 ESR2Q92731 530 aa22.46■■□□□ 1.19
KNSTRN-208ENST00000559604 TRIM43Q96BQ3 446 aaPredicted RBP22.46■■□□□ 1.19
KNSTRN-208ENST00000559604 ZKSCAN3Q9BRR0 538 aa22.46■■□□□ 1.19
KNSTRN-208ENST00000559604 DDX49Q9Y6V7 483 aaKnown RBP22.46■■□□□ 1.19
KNSTRN-208ENST00000559604 SNHG28P0DPA3 235 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms