RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 BADQ92934 168 aa17.67■□□□□ 0.42
LRRC28-213ENST00000559399 LNPKQ9C0E8 428 aa17.67■□□□□ 0.42
LRRC28-213ENST00000559399 ABHD16BQ9H3Z7 469 aa17.67■□□□□ 0.42
LRRC28-213ENST00000559399 RNF146Q9NTX7 359 aa17.67■□□□□ 0.42
LRRC28-213ENST00000559399 TACC3Q9Y6A5 838 aa17.67■□□□□ 0.42
LRRC28-213ENST00000559399 ZNF536O15090 1300 aa17.67■□□□□ 0.42
LRRC28-213ENST00000559399 TRIM43BA6NCK2 446 aa17.66■□□□□ 0.42
LRRC28-213ENST00000559399 MOXD2PA6NHM9 499 aa17.66■□□□□ 0.42
LRRC28-213ENST00000559399 TRIM6-TRIM34B2RNG4 842 aa17.66■□□□□ 0.42
LRRC28-213ENST00000559399 POTEB2H3BUK9 544 aa17.66■□□□□ 0.42
LRRC28-213ENST00000559399 PQBP1O60828 265 aaKnown RBP17.66■□□□□ 0.42
LRRC28-213ENST00000559399 CLTBP09497 229 aa17.66■□□□□ 0.42
LRRC28-213ENST00000559399 FGRP09769 529 aa17.66■□□□□ 0.42
LRRC28-213ENST00000559399 NOVP48745 357 aa17.66■□□□□ 0.42
LRRC28-213ENST00000559399 ACLYP53396 1101 aa17.66■□□□□ 0.42
LRRC28-213ENST00000559399 TKFCQ3LXA3 575 aa17.66■□□□□ 0.42
LRRC28-213ENST00000559399 RCSD1Q6JBY9 416 aa17.66■□□□□ 0.42
LRRC28-213ENST00000559399 SH3RF1Q7Z6J0 888 aa17.66■□□□□ 0.42
LRRC28-213ENST00000559399 KLHDC9Q8NEP7 349 aa17.66■□□□□ 0.42
LRRC28-213ENST00000559399 NUP133Q8WUM0 1156 aa17.66■□□□□ 0.42
LRRC28-213ENST00000559399 TRIM43Q96BQ3 446 aaPredicted RBP17.66■□□□□ 0.42
LRRC28-213ENST00000559399 AGBL1Q96MI9 1066 aa17.66■□□□□ 0.42
LRRC28-213ENST00000559399 YTHDC1Q96MU7 727 aaKnown RBP17.66■□□□□ 0.42
LRRC28-213ENST00000559399 A1CFQ9NQ94 594 aaKnown RBP17.66■□□□□ 0.42
LRRC28-213ENST00000559399 STARD7Q9NQZ5 370 aa17.66■□□□□ 0.42
LRRC28-213ENST00000559399 TOMM22Q9NS69 142 aa17.66■□□□□ 0.42
LRRC28-213ENST00000559399 DNAH12Q6ZR08 3092 aa17.66■□□□□ 0.42
LRRC28-213ENST00000559399 FGAP02671 866 aa17.65■□□□□ 0.42
LRRC28-213ENST00000559399 CCDC96Q2M329 555 aa17.65■□□□□ 0.42
LRRC28-213ENST00000559399 CCDC144BQ3MJ40 725 aa17.65■□□□□ 0.42
LRRC28-213ENST00000559399 CCDC174Q6PII3 467 aa17.65■□□□□ 0.42
LRRC28-213ENST00000559399 RASGRP2Q7LDG7 609 aa17.65■□□□□ 0.42
LRRC28-213ENST00000559399 CCDC144CPQ8IYA2 1237 aa17.65■□□□□ 0.42
LRRC28-213ENST00000559399 FAM133AQ8N9E0 248 aa17.65■□□□□ 0.42
LRRC28-213ENST00000559399 DCAF4Q8WV16 495 aa17.65■□□□□ 0.42
LRRC28-213ENST00000559399 SPC25Q9HBM1 224 aa17.65■□□□□ 0.42
LRRC28-213ENST00000559399 PRR12Q9ULL5 1215 aa17.65■□□□□ 0.42
LRRC28-213ENST00000559399 MTMR7Q9Y216 660 aa17.65■□□□□ 0.42
LRRC28-213ENST00000559399 ZMYM6O95789 1325 aa17.65■□□□□ 0.42
LRRC28-213ENST00000559399 COL11A1P12107 1806 aaPredicted RBP17.64■□□□□ 0.41
LRRC28-213ENST00000559399 C6orf222P0C671 652 aaPredicted RBP17.64■□□□□ 0.41
LRRC28-213ENST00000559399 HSPD1P10809 573 aaKnown RBP17.64■□□□□ 0.41
LRRC28-213ENST00000559399 ALAS1P13196 640 aa17.64■□□□□ 0.41
LRRC28-213ENST00000559399 CST5P28325 142 aaPredicted RBP17.64■□□□□ 0.41
LRRC28-213ENST00000559399 CNTN2Q02246 1040 aa17.64■□□□□ 0.41
LRRC28-213ENST00000559399 NMIQ13287 307 aaPredicted RBP17.64■□□□□ 0.41
LRRC28-213ENST00000559399 SHHQ15465 462 aa17.64■□□□□ 0.41
LRRC28-213ENST00000559399 KCNA10Q16322 511 aa17.64■□□□□ 0.41
LRRC28-213ENST00000559399 RRP12Q5JTH9 1297 aaKnown RBP17.64■□□□□ 0.41
LRRC28-213ENST00000559399 CCSAPQ6IQ19 270 aaPredicted RBP17.64■□□□□ 0.41
LRRC28-213ENST00000559399 ZNF589Q86UQ0 364 aaPredicted RBP17.64■□□□□ 0.41
LRRC28-213ENST00000559399 SMC5Q8IY18 1101 aa17.64■□□□□ 0.41
LRRC28-213ENST00000559399 TRERF1Q96PN7 1200 aa17.64■□□□□ 0.41
LRRC28-213ENST00000559399 RWDD1Q9H446 243 aaPredicted RBP17.64■□□□□ 0.41
LRRC28-213ENST00000559399 MTMR10Q9NXD2 777 aa17.64■□□□□ 0.41
LRRC28-213ENST00000559399 STXBP5LQ9Y2K9 1186 aa17.64■□□□□ 0.41
LRRC28-213ENST00000559399 CCDC171Q6TFL3 1326 aa17.64■□□□□ 0.41
LRRC28-213ENST00000559399 MYADML2A6NDP7 307 aa17.63■□□□□ 0.41
LRRC28-213ENST00000559399 KIAA0355O15063 1070 aa17.63■□□□□ 0.41
LRRC28-213ENST00000559399 ADCY6O43306 1168 aa17.63■□□□□ 0.41
LRRC28-213ENST00000559399 SNAP25P60880 206 aa17.63■□□□□ 0.41
LRRC28-213ENST00000559399 C9orf50Q5SZB4 431 aa17.63■□□□□ 0.41
LRRC28-213ENST00000559399 FAM109BQ6ICB4 259 aaPredicted RBP17.63■□□□□ 0.41
LRRC28-213ENST00000559399 ANKRD33Q7Z3H0 272 aa17.63■□□□□ 0.41
LRRC28-213ENST00000559399 PCSK9Q8NBP7 692 aaKnown RBP17.63■□□□□ 0.41
LRRC28-213ENST00000559399 SLC17A8Q8NDX2 589 aa17.63■□□□□ 0.41
LRRC28-213ENST00000559399 RILPL2Q969X0 211 aa17.63■□□□□ 0.41
LRRC28-213ENST00000559399 GLT1D1Q96MS3 346 aa17.63■□□□□ 0.41
LRRC28-213ENST00000559399 KATNBL1Q9H079 304 aa17.63■□□□□ 0.41
LRRC28-213ENST00000559399 UPF3AQ9H1J1 476 aaKnown RBP17.63■□□□□ 0.41
LRRC28-213ENST00000559399 CCPG1Q9ULG6 757 aa17.63■□□□□ 0.41
LRRC28-213ENST00000559399 SOWAHBA6NEL2 793 aa17.62■□□□□ 0.41
LRRC28-213ENST00000559399 ASB14A6NK59 587 aa17.62■□□□□ 0.41
LRRC28-213ENST00000559399 DCDC2CA8MYV0 355 aa17.62■□□□□ 0.41
LRRC28-213ENST00000559399 TOP1P11387 765 aaKnown RBP17.62■□□□□ 0.41
LRRC28-213ENST00000559399 PCP11498 1178 aaKnown RBP17.62■□□□□ 0.41
LRRC28-213ENST00000559399 RAG1P15918 1043 aa17.62■□□□□ 0.41
LRRC28-213ENST00000559399 GJA9P57773 515 aa17.62■□□□□ 0.41
LRRC28-213ENST00000559399 HAND2P61296 217 aa17.62■□□□□ 0.41
LRRC28-213ENST00000559399 B4GALNT3Q6L9W6 998 aa17.62■□□□□ 0.41
LRRC28-213ENST00000559399 TOX2Q96NM4 488 aa17.62■□□□□ 0.41
LRRC28-213ENST00000559399 TCP11L1Q9NUJ3 509 aa17.62■□□□□ 0.41
LRRC28-213ENST00000559399 TMEM39AQ9NV64 488 aa17.62■□□□□ 0.41
LRRC28-213ENST00000559399 ICAM1P05362 532 aa17.61■□□□□ 0.41
LRRC28-213ENST00000559399 ITGB8P26012 769 aa17.61■□□□□ 0.41
LRRC28-213ENST00000559399 MFAP1P55081 439 aaKnown RBP17.61■□□□□ 0.41
LRRC28-213ENST00000559399 FAAP100Q0VG06 881 aa17.61■□□□□ 0.41
LRRC28-213ENST00000559399 CHD1LQ86WJ1 897 aa17.61■□□□□ 0.41
LRRC28-213ENST00000559399 TMEM47Q9BQJ4 181 aa17.61■□□□□ 0.41
LRRC28-213ENST00000559399 RANBP17Q9H2T7 1088 aaKnown RBP17.61■□□□□ 0.41
LRRC28-213ENST00000559399 CYP39A1Q9NYL5 469 aa17.61■□□□□ 0.41
LRRC28-213ENST00000559399 ELP1O95163 1332 aa17.61■□□□□ 0.41
LRRC28-213ENST00000559399 ASGR1P07306 291 aa17.6■□□□□ 0.41
LRRC28-213ENST00000559399 SDSP20132 328 aa17.6■□□□□ 0.41
LRRC28-213ENST00000559399 SLC16A2P36021 539 aa17.6■□□□□ 0.41
LRRC28-213ENST00000559399 IRX5P78411 483 aaPredicted RBP17.6■□□□□ 0.41
LRRC28-213ENST00000559399 NUCB1Q02818 461 aa17.6■□□□□ 0.41
LRRC28-213ENST00000559399 TNFAIP2Q03169 654 aa17.6■□□□□ 0.41
LRRC28-213ENST00000559399 MUM1L1Q5H9M0 696 aa17.6■□□□□ 0.41
LRRC28-213ENST00000559399 GNASQ5JWF2 1037 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms