RNA–Protein interactions for RNA: ENST00000558953.1

MARK3-216, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-216ENST00000558953 SEMA6BQ9H3T3 888 aa7.48□□□□□ -1.21
MARK3-216ENST00000558953 AATFQ9NY61 560 aaKnown RBP eCLIP7.48□□□□□ -1.21
MARK3-216ENST00000558953 MYH1P12882 1939 aa7.48□□□□□ -1.21
MARK3-216ENST00000558953 LOC285556D6RIA3 1793 aa7.48□□□□□ -1.21
MARK3-216ENST00000558953 MYPNQ86TC9 1320 aa7.48□□□□□ -1.21
MARK3-216ENST00000558953 SIPA1L1O43166 1804 aa7.48□□□□□ -1.21
MARK3-216ENST00000558953 CEP290O15078 2479 aa7.47□□□□□ -1.21
MARK3-216ENST00000558953 DOCK3Q8IZD9 2030 aa7.47□□□□□ -1.21
MARK3-216ENST00000558953 USP17L5A8MUK1 530 aa7.47□□□□□ -1.21
MARK3-216ENST00000558953 MX2P20592 715 aa7.47□□□□□ -1.21
MARK3-216ENST00000558953 CYP7A1P22680 504 aa7.47□□□□□ -1.21
MARK3-216ENST00000558953 SPP2Q13103 211 aa7.47□□□□□ -1.21
MARK3-216ENST00000558953 PABPC4Q13310 644 aaKnown RBP eCLIP7.47□□□□□ -1.21
MARK3-216ENST00000558953 QPCTQ16769 361 aa7.47□□□□□ -1.21
MARK3-216ENST00000558953 TMED8Q6PL24 325 aaPredicted RBP7.47□□□□□ -1.21
MARK3-216ENST00000558953 ADGRA1Q86SQ6 560 aa7.47□□□□□ -1.21
MARK3-216ENST00000558953 CCDC84Q86UT8 332 aaPredicted RBP7.47□□□□□ -1.21
MARK3-216ENST00000558953 AACSQ86V21 672 aa7.47□□□□□ -1.21
MARK3-216ENST00000558953 CERS3Q8IU89 383 aa7.47□□□□□ -1.21
MARK3-216ENST00000558953 MAPKAPK5Q8IW41 473 aa7.47□□□□□ -1.21
MARK3-216ENST00000558953 ZNF280CQ8ND82 737 aa7.47□□□□□ -1.21
MARK3-216ENST00000558953 RAET1EQ8TD07 263 aa7.47□□□□□ -1.21
MARK3-216ENST00000558953 TGFBRAP1Q8WUH2 860 aa7.47□□□□□ -1.21
MARK3-216ENST00000558953 GTPBP3Q969Y2 492 aaKnown RBP7.47□□□□□ -1.21
MARK3-216ENST00000558953 TRERF1Q96PN7 1200 aa7.47□□□□□ -1.21
MARK3-216ENST00000558953 TRIM34Q9BYJ4 488 aa7.47□□□□□ -1.21
MARK3-216ENST00000558953 AS3MTQ9HBK9 375 aa7.47□□□□□ -1.21
MARK3-216ENST00000558953 PIH1D3Q9NQM4 214 aaKnown RBP7.47□□□□□ -1.21
MARK3-216ENST00000558953 TLR7Q9NYK1 1049 aaKnown RBP7.47□□□□□ -1.21
MARK3-216ENST00000558953 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.47□□□□□ -1.21
MARK3-216ENST00000558953 CDV3Q9UKY7 258 aaKnown RBP7.47□□□□□ -1.21
MARK3-216ENST00000558953 AGTPBP1Q9UPW5 1226 aa7.47□□□□□ -1.21
MARK3-216ENST00000558953 EXOC6BQ9Y2D4 811 aa7.47□□□□□ -1.21
MARK3-216ENST00000558953 C1QTNF9BB2RNN3 333 aa7.46□□□□□ -1.22
MARK3-216ENST00000558953 HMMRO75330 724 aa7.46□□□□□ -1.22
MARK3-216ENST00000558953 IDH1O75874 414 aaKnown RBP7.46□□□□□ -1.22
MARK3-216ENST00000558953 MYCP01106 439 aaPredicted RBP7.46□□□□□ -1.22
MARK3-216ENST00000558953 HLA-DOAP06340 250 aa7.46□□□□□ -1.22
MARK3-216ENST00000558953 ASNSP08243 561 aa7.46□□□□□ -1.22
MARK3-216ENST00000558953 GRK4P32298 578 aa7.46□□□□□ -1.22
MARK3-216ENST00000558953 GCLCP48506 637 aaPredicted RBP7.46□□□□□ -1.22
MARK3-216ENST00000558953 UBXN2AP68543 259 aa7.46□□□□□ -1.22
MARK3-216ENST00000558953 PRKCZQ05513 592 aa7.46□□□□□ -1.22
MARK3-216ENST00000558953 MAP3K12Q12852 859 aa7.46□□□□□ -1.22
MARK3-216ENST00000558953 RRP1BQ14684 758 aaKnown RBP7.46□□□□□ -1.22
MARK3-216ENST00000558953 TREML2Q5T2D2 321 aa7.46□□□□□ -1.22
MARK3-216ENST00000558953 RIPOR1Q6ZS17 1223 aa7.46□□□□□ -1.22
MARK3-216ENST00000558953 RPAP2Q8IXW5 612 aaPredicted RBP7.46□□□□□ -1.22
MARK3-216ENST00000558953 CRACR2BQ8N4Y2 399 aaPredicted RBP7.46□□□□□ -1.22
MARK3-216ENST00000558953 GCC1Q96CN9 775 aa7.46□□□□□ -1.22
MARK3-216ENST00000558953 YTHDC1Q96MU7 727 aaKnown RBP7.46□□□□□ -1.22
MARK3-216ENST00000558953 WDR18Q9BV38 432 aa7.46□□□□□ -1.22
MARK3-216ENST00000558953 OXCT2Q9BYC2 517 aaPredicted RBP7.46□□□□□ -1.22
MARK3-216ENST00000558953 CHMP4BQ9H444 224 aaKnown RBP7.46□□□□□ -1.22
MARK3-216ENST00000558953 GINM1Q9NU53 330 aa7.46□□□□□ -1.22
MARK3-216ENST00000558953 BIN2Q9UBW5 565 aaPredicted RBP7.46□□□□□ -1.22
MARK3-216ENST00000558953 DDX19BQ9UMR2 479 aa7.46□□□□□ -1.22
MARK3-216ENST00000558953 FLT1P17948 1338 aa7.46□□□□□ -1.22
MARK3-216ENST00000558953 TNPO2O14787 897 aaKnown RBP7.45□□□□□ -1.22
MARK3-216ENST00000558953 HMGCS2P54868 508 aa7.45□□□□□ -1.22
MARK3-216ENST00000558953 DYNLL1P63167 89 aaKnown RBP7.45□□□□□ -1.22
MARK3-216ENST00000558953 GRIN2CQ14957 1233 aa7.45□□□□□ -1.22
MARK3-216ENST00000558953 TTF1Q15361 905 aaPredicted RBP7.45□□□□□ -1.22
MARK3-216ENST00000558953 FAM110CQ1W6H9 321 aa7.45□□□□□ -1.22
MARK3-216ENST00000558953 PRICKLE2Q7Z3G6 844 aa7.45□□□□□ -1.22
MARK3-216ENST00000558953 METTL16Q86W50 562 aaKnown RBP7.45□□□□□ -1.22
MARK3-216ENST00000558953 CLASRPQ8N2M8 674 aaKnown RBP7.45□□□□□ -1.22
MARK3-216ENST00000558953 MAGEB6Q8N7X4 407 aa7.45□□□□□ -1.22
MARK3-216ENST00000558953 MIGA1Q8NAN2 632 aa7.45□□□□□ -1.22
MARK3-216ENST00000558953 RHPN1Q8TCX5 695 aa7.45□□□□□ -1.22
MARK3-216ENST00000558953 GPKOWQ92917 476 aaPredicted RBP eCLIP7.45□□□□□ -1.22
MARK3-216ENST00000558953 COA7Q96BR5 231 aa7.45□□□□□ -1.22
MARK3-216ENST00000558953 PALD1Q9ULE6 856 aa7.45□□□□□ -1.22
MARK3-216ENST00000558953 SHISA8B8ZZ34 492 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 C19orf81C9J6K1 198 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 USP17L10C9JJH3 530 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 ADCY3O60266 1144 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 RAB11FIP3O75154 756 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 GJB1P08034 283 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 CCL5P13501 91 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 RHOQP17081 205 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 USP5P45974 858 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 FLT3LGP49771 235 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 BACE1P56817 501 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 IRF5Q13568 498 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 MTFR1Q15390 333 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 CSPP1Q1MSJ5 1256 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 TUSC1Q2TAM9 212 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 INTS6LQ5JSJ4 861 aaKnown RBP7.44□□□□□ -1.22
MARK3-216ENST00000558953 TTC6Q86TZ1 520 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 CD163Q86VB7 1156 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 ANKRD13CQ8N6S4 541 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.44□□□□□ -1.22
MARK3-216ENST00000558953 TSC1Q92574 1164 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 KIF1BPQ96EK5 621 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 ASCC2Q9H1I8 757 aaPredicted RBP7.44□□□□□ -1.22
MARK3-216ENST00000558953 ANTXR1Q9H6X2 564 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 IL1RAPL2Q9NP60 686 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 ZBTB40Q9NUA8 1239 aa7.44□□□□□ -1.22
MARK3-216ENST00000558953 TMOD4Q9NZQ9 345 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms