RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 SH3RF1Q7Z6J0 888 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 ZNF467Q7Z7K2 595 aaPredicted RBP6.59□□□□□ -1.35
SMAD3-209ENST00000558894 TDHQ8IZJ6 230 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 CPXCR1Q8N123 301 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 MSL3Q8N5Y2 521 aaKnown RBP6.59□□□□□ -1.35
SMAD3-209ENST00000558894 FAM133AQ8N9E0 248 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 ARRDC4Q8NCT1 418 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 KLHDC9Q8NEP7 349 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 EXOC6Q8TAG9 804 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 STAG1Q8WVM7 1258 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 KIFC2Q96AC6 838 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 TRIM43Q96BQ3 446 aaPredicted RBP6.59□□□□□ -1.35
SMAD3-209ENST00000558894 AGBL1Q96MI9 1066 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 NACAP1Q9BZK3 213 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 LNPKQ9C0E8 428 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 IL25Q9H293 177 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 ZNF287Q9HBT7 754 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 TCP11L1Q9NUJ3 509 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 SLC5A4Q9NY91 659 aa6.59□□□□□ -1.35
SMAD3-209ENST00000558894 DDX49Q9Y6V7 483 aaKnown RBP6.59□□□□□ -1.35
SMAD3-209ENST00000558894 SYNRGQ9UMZ2 1314 aa6.58□□□□□ -1.36
SMAD3-209ENST00000558894 RAD21O60216 631 aa6.58□□□□□ -1.36
SMAD3-209ENST00000558894 ZBED4O75132 1171 aa6.58□□□□□ -1.36
SMAD3-209ENST00000558894 PGK1P00558 417 aa6.58□□□□□ -1.36
SMAD3-209ENST00000558894 SNHG28P0DPA3 235 aa6.58□□□□□ -1.36
SMAD3-209ENST00000558894 PDE4AP27815 886 aa6.58□□□□□ -1.36
SMAD3-209ENST00000558894 SNAP25P60880 206 aa6.58□□□□□ -1.36
SMAD3-209ENST00000558894 MDM2Q00987 491 aaPredicted RBP6.58□□□□□ -1.36
SMAD3-209ENST00000558894 CNTN2Q02246 1040 aa6.58□□□□□ -1.36
SMAD3-209ENST00000558894 CACNB1Q02641 598 aaPredicted RBP6.58□□□□□ -1.36
SMAD3-209ENST00000558894 TRIM60Q495X7 471 aa6.58□□□□□ -1.36
SMAD3-209ENST00000558894 MUM1L1Q5H9M0 696 aa6.58□□□□□ -1.36
SMAD3-209ENST00000558894 TMEM63BQ5T3F8 832 aa6.58□□□□□ -1.36
SMAD3-209ENST00000558894 TTBK2Q6IQ55 1244 aa6.58□□□□□ -1.36
SMAD3-209ENST00000558894 B4GALNT3Q6L9W6 998 aa6.58□□□□□ -1.36
SMAD3-209ENST00000558894 BTNL9Q6UXG8 535 aa6.58□□□□□ -1.36
SMAD3-209ENST00000558894 KCTD1Q719H9 257 aa6.58□□□□□ -1.36
SMAD3-209ENST00000558894 CHD1LQ86WJ1 897 aa6.58□□□□□ -1.36
SMAD3-209ENST00000558894 TBC1D10CQ8IV04 446 aa6.58□□□□□ -1.36
SMAD3-209ENST00000558894 CHST13Q8NET6 341 aa6.58□□□□□ -1.36
SMAD3-209ENST00000558894 FERMT2Q96AC1 680 aa6.58□□□□□ -1.36
SMAD3-209ENST00000558894 PURBQ96QR8 312 aaKnown RBP6.58□□□□□ -1.36
SMAD3-209ENST00000558894 TMEM47Q9BQJ4 181 aa6.58□□□□□ -1.36
SMAD3-209ENST00000558894 UBE2OQ9C0C9 1292 aaKnown RBP6.58□□□□□ -1.36
SMAD3-209ENST00000558894 UPF3AQ9H1J1 476 aaKnown RBP6.58□□□□□ -1.36
SMAD3-209ENST00000558894 A1CFQ9NQ94 594 aaKnown RBP6.58□□□□□ -1.36
SMAD3-209ENST00000558894 XPNPEP3Q9NQH7 507 aa6.58□□□□□ -1.36
SMAD3-209ENST00000558894 PDLIM7Q9NR12 457 aa6.58□□□□□ -1.36
SMAD3-209ENST00000558894 PRR12Q9ULL5 1215 aa6.58□□□□□ -1.36
SMAD3-209ENST00000558894 CCDC171Q6TFL3 1326 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 MYH7BA7E2Y1 1941 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 PTPRSQ13332 1948 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 A0A1W2PQ45 241 aaPredicted RBP6.57□□□□□ -1.36
SMAD3-209ENST00000558894 A0A1W2PQY0 241 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 TSPY2A6NKD2 308 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 POTEB2H3BUK9 544 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 SLC3A2P08195 630 aaKnown RBP6.57□□□□□ -1.36
SMAD3-209ENST00000558894 FDX1P10109 184 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 RARBP10826 455 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 AKR1A1P14550 325 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 SDSP20132 328 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 PTGS1P23219 599 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 CST5P28325 142 aaPredicted RBP6.57□□□□□ -1.36
SMAD3-209ENST00000558894 CDK7P50613 346 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 STAT2P52630 851 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 ACLYP53396 1101 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 EPHB4P54760 987 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 TLE2Q04725 743 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 FAAP100Q0VG06 881 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 ACVR2BQ13705 512 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 C9orf50Q5SZB4 431 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 Q7L0L9 218 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 CCDC144CPQ8IYA2 1237 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 MORC4Q8TE76 937 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 CHMP4CQ96CF2 233 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 YTHDC1Q96MU7 727 aaKnown RBP6.57□□□□□ -1.36
SMAD3-209ENST00000558894 TSEN34Q9BSV6 310 aaKnown RBP6.57□□□□□ -1.36
SMAD3-209ENST00000558894 COL25A1Q9BXS0 654 aaPredicted RBP6.57□□□□□ -1.36
SMAD3-209ENST00000558894 RANBP17Q9H2T7 1088 aaKnown RBP6.57□□□□□ -1.36
SMAD3-209ENST00000558894 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.57□□□□□ -1.36
SMAD3-209ENST00000558894 FBXO40Q9UH90 709 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 STX8Q9UNK0 236 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 ATP11BQ9Y2G3 1177 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 CHD9Q3L8U1 2897 aa6.57□□□□□ -1.36
SMAD3-209ENST00000558894 NEDD4P46934 1319 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 SCN5AQ14524 2016 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.56□□□□□ -1.36
SMAD3-209ENST00000558894 KBTBD13C9JR72 458 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 KIAA0355O15063 1070 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 RANBP6O60518 1105 aaKnown RBP6.56□□□□□ -1.36
SMAD3-209ENST00000558894 DUSP11O75319 330 aaKnown RBP6.56□□□□□ -1.36
SMAD3-209ENST00000558894 ICAM1P05362 532 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 PDHBP11177 359 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 TOP1P11387 765 aaKnown RBP6.56□□□□□ -1.36
SMAD3-209ENST00000558894 SLC1A4P43007 532 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 SLC4A3P48751 1232 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 GJA9P57773 515 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 HAND2P61296 217 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 SHHQ15465 462 aa6.56□□□□□ -1.36
SMAD3-209ENST00000558894 KCNA10Q16322 511 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms