RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 FDX1P10109 184 aa19.08■□□□□ 0.64
CDC42BPB-203ENST00000558867 OAZ1P54368 228 aa19.08■□□□□ 0.64
CDC42BPB-203ENST00000558867 GJA9P57773 515 aa19.08■□□□□ 0.64
CDC42BPB-203ENST00000558867 CCDC144BQ3MJ40 725 aa19.08■□□□□ 0.64
CDC42BPB-203ENST00000558867 SBK1Q52WX2 424 aa19.08■□□□□ 0.64
CDC42BPB-203ENST00000558867 TMEM240Q5SV17 173 aa19.08■□□□□ 0.64
CDC42BPB-203ENST00000558867 GIMAP6Q6P9H5 292 aa19.08■□□□□ 0.64
CDC42BPB-203ENST00000558867 ZNF444Q8N0Y2 327 aaPredicted RBP19.08■□□□□ 0.64
CDC42BPB-203ENST00000558867 PPM1EQ8WY54 764 aa19.08■□□□□ 0.64
CDC42BPB-203ENST00000558867 NUP88Q99567 741 aaPredicted RBP19.08■□□□□ 0.64
CDC42BPB-203ENST00000558867 SEZ6LQ9BYH1 1024 aa19.08■□□□□ 0.64
CDC42BPB-203ENST00000558867 TSPYL2Q9H2G4 693 aaPredicted RBP19.08■□□□□ 0.64
CDC42BPB-203ENST00000558867 FEM1BQ9UK73 627 aa19.08■□□□□ 0.64
CDC42BPB-203ENST00000558867 CABYRO75952 493 aa19.07■□□□□ 0.64
CDC42BPB-203ENST00000558867 NDUFB10O96000 172 aa19.07■□□□□ 0.64
CDC42BPB-203ENST00000558867 CSF2RAP15509 400 aa19.07■□□□□ 0.64
CDC42BPB-203ENST00000558867 NOL8Q76FK4 1167 aaKnown RBP19.07■□□□□ 0.64
CDC42BPB-203ENST00000558867 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.07■□□□□ 0.64
CDC42BPB-203ENST00000558867 KIFC2Q96AC6 838 aa19.07■□□□□ 0.64
CDC42BPB-203ENST00000558867 PBX4Q9BYU1 374 aa19.07■□□□□ 0.64
CDC42BPB-203ENST00000558867 UPF3AQ9H1J1 476 aaKnown RBP19.07■□□□□ 0.64
CDC42BPB-203ENST00000558867 THEGQ9P2T0 379 aa19.07■□□□□ 0.64
CDC42BPB-203ENST00000558867 CLIP2Q9UDT6 1046 aa19.07■□□□□ 0.64
CDC42BPB-203ENST00000558867 SYNPO2Q9UMS6 1093 aa19.07■□□□□ 0.64
CDC42BPB-203ENST00000558867 RIPK3Q9Y572 518 aa19.07■□□□□ 0.64
CDC42BPB-203ENST00000558867 MINDY4BA8MYZ0 360 aa19.06■□□□□ 0.64
CDC42BPB-203ENST00000558867 ZEB2O60315 1214 aa19.06■□□□□ 0.64
CDC42BPB-203ENST00000558867 IGHDP01880 384 aa19.06■□□□□ 0.64
CDC42BPB-203ENST00000558867 SLFNL1Q499Z3 407 aa19.06■□□□□ 0.64
CDC42BPB-203ENST00000558867 ZNF365Q70YC5 407 aa19.06■□□□□ 0.64
CDC42BPB-203ENST00000558867 ARMCX2Q7L311 632 aa19.06■□□□□ 0.64
CDC42BPB-203ENST00000558867 USP38Q8NB14 1042 aa19.06■□□□□ 0.64
CDC42BPB-203ENST00000558867 PPP1R12CQ9BZL4 782 aa19.06■□□□□ 0.64
CDC42BPB-203ENST00000558867 PUS7LQ9H0K6 701 aaKnown RBP19.06■□□□□ 0.64
CDC42BPB-203ENST00000558867 SLC28A3Q9HAS3 691 aa19.06■□□□□ 0.64
CDC42BPB-203ENST00000558867 SLC38A10Q9HBR0 1119 aa19.06■□□□□ 0.64
CDC42BPB-203ENST00000558867 SMIM22K7EJ46 135 aa19.05■□□□□ 0.64
CDC42BPB-203ENST00000558867 FGBP02675 491 aa19.05■□□□□ 0.64
CDC42BPB-203ENST00000558867 MRPS5P82675 430 aaKnown RBP19.05■□□□□ 0.64
CDC42BPB-203ENST00000558867 RASIP1Q5U651 963 aa19.05■□□□□ 0.64
CDC42BPB-203ENST00000558867 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.05■□□□□ 0.64
CDC42BPB-203ENST00000558867 PRDM12Q9H4Q4 367 aa19.05■□□□□ 0.64
CDC42BPB-203ENST00000558867 RAVER2Q9HCJ3 691 aaKnown RBP19.05■□□□□ 0.64
CDC42BPB-203ENST00000558867 IL23AQ9NPF7 189 aa19.05■□□□□ 0.64
CDC42BPB-203ENST00000558867 MYADML2A6NDP7 307 aa19.04■□□□□ 0.64
CDC42BPB-203ENST00000558867 GNAT2P19087 354 aa19.04■□□□□ 0.64
CDC42BPB-203ENST00000558867 COL9A1P20849 921 aa19.04■□□□□ 0.64
CDC42BPB-203ENST00000558867 RASA1P20936 1047 aa19.04■□□□□ 0.64
CDC42BPB-203ENST00000558867 IGFBP4P22692 258 aa19.04■□□□□ 0.64
CDC42BPB-203ENST00000558867 TNFAIP2Q03169 654 aa19.04■□□□□ 0.64
CDC42BPB-203ENST00000558867 C16orf59Q7L2K0 433 aa19.04■□□□□ 0.64
CDC42BPB-203ENST00000558867 FAM126BQ8IXS8 530 aa19.04■□□□□ 0.64
CDC42BPB-203ENST00000558867 HERVK_113Q902F9 699 aa19.04■□□□□ 0.64
CDC42BPB-203ENST00000558867 ASB2Q96Q27 587 aa19.04■□□□□ 0.64
CDC42BPB-203ENST00000558867 STRBPQ96SI9 672 aaKnown RBP19.04■□□□□ 0.64
CDC42BPB-203ENST00000558867 AP5M1Q9H0R1 490 aa19.04■□□□□ 0.64
CDC42BPB-203ENST00000558867 ASB14A6NK59 587 aa19.03■□□□□ 0.64
CDC42BPB-203ENST00000558867 GRXCR1A8MXD5 290 aa19.03■□□□□ 0.64
CDC42BPB-203ENST00000558867 TTLL1O95922 423 aa19.03■□□□□ 0.64
CDC42BPB-203ENST00000558867 ACRP10323 421 aa19.03■□□□□ 0.64
CDC42BPB-203ENST00000558867 PBX2P40425 430 aa19.03■□□□□ 0.64
CDC42BPB-203ENST00000558867 LRRFIP1Q32MZ4 808 aaKnown RBP19.03■□□□□ 0.64
CDC42BPB-203ENST00000558867 PPP4R3BQ5MIZ7 849 aa19.03■□□□□ 0.64
CDC42BPB-203ENST00000558867 CCDC144CPQ8IYA2 1237 aa19.03■□□□□ 0.64
CDC42BPB-203ENST00000558867 RPUSD2Q8IZ73 545 aaKnown RBP19.03■□□□□ 0.64
CDC42BPB-203ENST00000558867 STK11IPQ8N1F8 1099 aa19.03■□□□□ 0.64
CDC42BPB-203ENST00000558867 MKL1Q969V6 931 aa19.03■□□□□ 0.64
CDC42BPB-203ENST00000558867 GPATCH3Q96I76 525 aa19.03■□□□□ 0.64
CDC42BPB-203ENST00000558867 LRRCC1Q9C099 1032 aa19.03■□□□□ 0.64
CDC42BPB-203ENST00000558867 HIPK3Q9H422 1215 aa19.03■□□□□ 0.64
CDC42BPB-203ENST00000558867 ACAD9Q9H845 621 aa19.03■□□□□ 0.64
CDC42BPB-203ENST00000558867 ISY1Q9ULR0 285 aaKnown RBP19.03■□□□□ 0.64
CDC42BPB-203ENST00000558867 MYH7P12883 1935 aa19.03■□□□□ 0.64
CDC42BPB-203ENST00000558867 APPP05067 770 aa19.02■□□□□ 0.64
CDC42BPB-203ENST00000558867 BMP3P12645 472 aa19.02■□□□□ 0.64
CDC42BPB-203ENST00000558867 TDO2P48775 406 aa19.02■□□□□ 0.64
CDC42BPB-203ENST00000558867 NKX3-2P78367 333 aa19.02■□□□□ 0.64
CDC42BPB-203ENST00000558867 GMCL1P1Q8NEA9 526 aa19.02■□□□□ 0.64
CDC42BPB-203ENST00000558867 CHURC1Q8WUH1 139 aa19.02■□□□□ 0.64
CDC42BPB-203ENST00000558867 MYO9BQ13459 2157 aa19.01■□□□□ 0.63
CDC42BPB-203ENST00000558867 GSG1L2A8MUP6 293 aa19.01■□□□□ 0.63
CDC42BPB-203ENST00000558867 CD4P01730 458 aa19.01■□□□□ 0.63
CDC42BPB-203ENST00000558867 SLC3A2P08195 630 aaKnown RBP19.01■□□□□ 0.63
CDC42BPB-203ENST00000558867 CYP2C18P33260 490 aa19.01■□□□□ 0.63
CDC42BPB-203ENST00000558867 IKQ13123 557 aaPredicted RBP19.01■□□□□ 0.63
CDC42BPB-203ENST00000558867 TKFCQ3LXA3 575 aa19.01■□□□□ 0.63
CDC42BPB-203ENST00000558867 SMC5Q8IY18 1101 aa19.01■□□□□ 0.63
CDC42BPB-203ENST00000558867 HOMER2Q9NSB8 354 aa19.01■□□□□ 0.63
CDC42BPB-203ENST00000558867 MTMR4Q9NYA4 1195 aa19.01■□□□□ 0.63
CDC42BPB-203ENST00000558867 ZFYP08048 801 aaPredicted RBP19■□□□□ 0.63
CDC42BPB-203ENST00000558867 TSPY3P0CV98 308 aa19■□□□□ 0.63
CDC42BPB-203ENST00000558867 TSPY8P0CW00 308 aa19■□□□□ 0.63
CDC42BPB-203ENST00000558867 STAT2P52630 851 aa19■□□□□ 0.63
CDC42BPB-203ENST00000558867 PDE4BQ07343 736 aa19■□□□□ 0.63
CDC42BPB-203ENST00000558867 ITGA7Q13683 1181 aa19■□□□□ 0.63
CDC42BPB-203ENST00000558867 CCDC85BQ15834 202 aaPredicted RBP19■□□□□ 0.63
CDC42BPB-203ENST00000558867 SLFN13Q68D06 897 aa19■□□□□ 0.63
CDC42BPB-203ENST00000558867 FAM160B2Q86V87 743 aa19■□□□□ 0.63
CDC42BPB-203ENST00000558867 SIRT2Q8IXJ6 389 aa19■□□□□ 0.63
CDC42BPB-203ENST00000558867 ADAMTS19Q8TE59 1207 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms