RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 ZBTB40Q9NUA8 1239 aa18.3■□□□□ 0.52
CPNE6-208ENST00000558795 CLIP2Q9UDT6 1046 aa18.3■□□□□ 0.52
CPNE6-208ENST00000558795 CSF2RAP15509 400 aa18.29■□□□□ 0.52
CPNE6-208ENST00000558795 GJA9P57773 515 aa18.29■□□□□ 0.52
CPNE6-208ENST00000558795 IRX5P78411 483 aaPredicted RBP18.29■□□□□ 0.52
CPNE6-208ENST00000558795 AAMPQ13685 434 aa18.29■□□□□ 0.52
CPNE6-208ENST00000558795 GIMAP6Q6P9H5 292 aa18.29■□□□□ 0.52
CPNE6-208ENST00000558795 ARMCX2Q7L311 632 aa18.29■□□□□ 0.52
CPNE6-208ENST00000558795 CHST13Q8NET6 341 aa18.29■□□□□ 0.52
CPNE6-208ENST00000558795 STRBPQ96SI9 672 aaKnown RBP18.29■□□□□ 0.52
CPNE6-208ENST00000558795 PBX4Q9BYU1 374 aa18.29■□□□□ 0.52
CPNE6-208ENST00000558795 SLC38A10Q9HBR0 1119 aa18.29■□□□□ 0.52
CPNE6-208ENST00000558795 ZNF287Q9HBT7 754 aa18.29■□□□□ 0.52
CPNE6-208ENST00000558795 FEM1BQ9UK73 627 aa18.29■□□□□ 0.52
CPNE6-208ENST00000558795 PRUNE2Q8WUY3 3088 aa18.29■□□□□ 0.52
CPNE6-208ENST00000558795 GRXCR1A8MXD5 290 aa18.28■□□□□ 0.52
CPNE6-208ENST00000558795 TNFRSF10AO00220 468 aa18.28■□□□□ 0.52
CPNE6-208ENST00000558795 ADCY6O43306 1168 aa18.28■□□□□ 0.52
CPNE6-208ENST00000558795 ACRP10323 421 aa18.28■□□□□ 0.52
CPNE6-208ENST00000558795 PBX2P40425 430 aa18.28■□□□□ 0.52
CPNE6-208ENST00000558795 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.28■□□□□ 0.52
CPNE6-208ENST00000558795 C16orf59Q7L2K0 433 aa18.28■□□□□ 0.52
CPNE6-208ENST00000558795 FAM126BQ8IXS8 530 aa18.28■□□□□ 0.52
CPNE6-208ENST00000558795 ZNF444Q8N0Y2 327 aaPredicted RBP18.28■□□□□ 0.52
CPNE6-208ENST00000558795 LRRCC1Q9C099 1032 aa18.28■□□□□ 0.52
CPNE6-208ENST00000558795 PRDM12Q9H4Q4 367 aa18.28■□□□□ 0.52
CPNE6-208ENST00000558795 GSG1L2A8MUP6 293 aa18.27■□□□□ 0.52
CPNE6-208ENST00000558795 OAZ1P54368 228 aa18.27■□□□□ 0.52
CPNE6-208ENST00000558795 RASIP1Q5U651 963 aa18.27■□□□□ 0.52
CPNE6-208ENST00000558795 ZNF365Q70YC5 407 aa18.27■□□□□ 0.52
CPNE6-208ENST00000558795 NOL8Q76FK4 1167 aaKnown RBP18.27■□□□□ 0.52
CPNE6-208ENST00000558795 CCDC144CPQ8IYA2 1237 aa18.27■□□□□ 0.52
CPNE6-208ENST00000558795 MTIF3Q9H2K0 278 aaKnown RBP18.27■□□□□ 0.52
CPNE6-208ENST00000558795 HOMER2Q9NSB8 354 aa18.27■□□□□ 0.52
CPNE6-208ENST00000558795 MSRAQ9UJ68 235 aa18.27■□□□□ 0.52
CPNE6-208ENST00000558795 ISY1Q9ULR0 285 aaKnown RBP18.27■□□□□ 0.52
CPNE6-208ENST00000558795 NEFLP07196 543 aa18.26■□□□□ 0.51
CPNE6-208ENST00000558795 TDO2P48775 406 aa18.26■□□□□ 0.51
CPNE6-208ENST00000558795 RAB30Q15771 203 aa18.26■□□□□ 0.51
CPNE6-208ENST00000558795 LRRC47Q8N1G4 583 aaKnown RBP18.26■□□□□ 0.51
CPNE6-208ENST00000558795 CEP95Q96GE4 821 aa18.26■□□□□ 0.51
CPNE6-208ENST00000558795 FGD4Q96M96 766 aa18.26■□□□□ 0.51
CPNE6-208ENST00000558795 ECHDC1Q9NTX5 307 aa18.26■□□□□ 0.51
CPNE6-208ENST00000558795 MYO9BQ13459 2157 aa18.25■□□□□ 0.51
CPNE6-208ENST00000558795 IGKV6D-41A0A0C4DH26 115 aa18.25■□□□□ 0.51
CPNE6-208ENST00000558795 PRDM1O75626 825 aa18.25■□□□□ 0.51
CPNE6-208ENST00000558795 TTLL1O95922 423 aa18.25■□□□□ 0.51
CPNE6-208ENST00000558795 APPP05067 770 aa18.25■□□□□ 0.51
CPNE6-208ENST00000558795 BEX3Q00994 111 aa18.25■□□□□ 0.51
CPNE6-208ENST00000558795 TNFAIP2Q03169 654 aa18.25■□□□□ 0.51
CPNE6-208ENST00000558795 AKNAD1Q5T1N1 836 aa18.25■□□□□ 0.51
CPNE6-208ENST00000558795 ATXN2LQ8WWM7 1075 aaKnown RBP18.25■□□□□ 0.51
CPNE6-208ENST00000558795 APPBP2Q92624 585 aa18.25■□□□□ 0.51
CPNE6-208ENST00000558795 MKL1Q969V6 931 aa18.25■□□□□ 0.51
CPNE6-208ENST00000558795 ACAD9Q9H845 621 aa18.25■□□□□ 0.51
CPNE6-208ENST00000558795 IL23AQ9NPF7 189 aa18.25■□□□□ 0.51
CPNE6-208ENST00000558795 MTMR4Q9NYA4 1195 aa18.25■□□□□ 0.51
CPNE6-208ENST00000558795 THEGQ9P2T0 379 aa18.25■□□□□ 0.51
CPNE6-208ENST00000558795 SYNPO2Q9UMS6 1093 aa18.25■□□□□ 0.51
CPNE6-208ENST00000558795 SMARCA5O60264 1052 aaPredicted RBP18.24■□□□□ 0.51
CPNE6-208ENST00000558795 FDX1P10109 184 aa18.24■□□□□ 0.51
CPNE6-208ENST00000558795 BMP3P12645 472 aa18.24■□□□□ 0.51
CPNE6-208ENST00000558795 GNAT2P19087 354 aa18.24■□□□□ 0.51
CPNE6-208ENST00000558795 IGFBP4P22692 258 aa18.24■□□□□ 0.51
CPNE6-208ENST00000558795 CYP2C18P33260 490 aa18.24■□□□□ 0.51
CPNE6-208ENST00000558795 IRX6P78412 446 aaPredicted RBP18.24■□□□□ 0.51
CPNE6-208ENST00000558795 CNTN2Q02246 1040 aa18.24■□□□□ 0.51
CPNE6-208ENST00000558795 SLFN13Q68D06 897 aa18.24■□□□□ 0.51
CPNE6-208ENST00000558795 KBTBD3Q8NAB2 608 aa18.24■□□□□ 0.51
CPNE6-208ENST00000558795 GMCL1P1Q8NEA9 526 aa18.24■□□□□ 0.51
CPNE6-208ENST00000558795 HIPK3Q9H422 1215 aa18.24■□□□□ 0.51
CPNE6-208ENST00000558795 SPTBN5Q9NRC6 3674 aaKnown RBP18.24■□□□□ 0.51
CPNE6-208ENST00000558795 CTAGE5O15320 804 aa18.23■□□□□ 0.51
CPNE6-208ENST00000558795 GPAA1O43292 621 aa18.23■□□□□ 0.51
CPNE6-208ENST00000558795 CABYRO75952 493 aa18.23■□□□□ 0.51
CPNE6-208ENST00000558795 CD4P01730 458 aa18.23■□□□□ 0.51
CPNE6-208ENST00000558795 FGBP02675 491 aa18.23■□□□□ 0.51
CPNE6-208ENST00000558795 IKQ13123 557 aaPredicted RBP18.23■□□□□ 0.51
CPNE6-208ENST00000558795 CXCL17Q6UXB2 119 aa18.23■□□□□ 0.51
CPNE6-208ENST00000558795 IL27Q8NEV9 243 aa18.23■□□□□ 0.51
CPNE6-208ENST00000558795 EXOC6Q8TAG9 804 aa18.23■□□□□ 0.51
CPNE6-208ENST00000558795 HERVK_113Q902F9 699 aa18.23■□□□□ 0.51
CPNE6-208ENST00000558795 OSBP2Q969R2 916 aa18.23■□□□□ 0.51
CPNE6-208ENST00000558795 GPATCH3Q96I76 525 aa18.23■□□□□ 0.51
CPNE6-208ENST00000558795 KATNBL1Q9H079 304 aa18.23■□□□□ 0.51
CPNE6-208ENST00000558795 AP5M1Q9H0R1 490 aa18.23■□□□□ 0.51
CPNE6-208ENST00000558795 SLC28A3Q9HAS3 691 aa18.23■□□□□ 0.51
CPNE6-208ENST00000558795 EPB41L4AQ9HCS5 686 aaPredicted RBP18.23■□□□□ 0.51
CPNE6-208ENST00000558795 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.22■□□□□ 0.51
CPNE6-208ENST00000558795 ASB14A6NK59 587 aa18.22■□□□□ 0.51
CPNE6-208ENST00000558795 TMEM232C9JQI7 657 aa18.22■□□□□ 0.51
CPNE6-208ENST00000558795 RNF113AO15541 343 aaKnown RBP18.22■□□□□ 0.51
CPNE6-208ENST00000558795 ZEB2O60315 1214 aa18.22■□□□□ 0.51
CPNE6-208ENST00000558795 TSPY3P0CV98 308 aa18.22■□□□□ 0.51
CPNE6-208ENST00000558795 TSPY8P0CW00 308 aa18.22■□□□□ 0.51
CPNE6-208ENST00000558795 COL9A1P20849 921 aa18.22■□□□□ 0.51
CPNE6-208ENST00000558795 STAT2P52630 851 aa18.22■□□□□ 0.51
CPNE6-208ENST00000558795 NKX3-2P78367 333 aa18.22■□□□□ 0.51
CPNE6-208ENST00000558795 CCDC85BQ15834 202 aaPredicted RBP18.22■□□□□ 0.51
CPNE6-208ENST00000558795 TLK2Q86UE8 772 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms