RNA–Protein interactions for RNA: ENST00000558791.5

CTDSPL2-203, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-203ENST00000558791 TMEM240Q5SV17 173 aa12.61□□□□□ -0.39
CTDSPL2-203ENST00000558791 MKL1Q969V6 931 aa12.61□□□□□ -0.39
CTDSPL2-203ENST00000558791 MKNK2Q9HBH9 465 aa12.61□□□□□ -0.39
CTDSPL2-203ENST00000558791 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.61□□□□□ -0.39
CTDSPL2-203ENST00000558791 FEM1BQ9UK73 627 aa12.61□□□□□ -0.39
CTDSPL2-203ENST00000558791 MUC3AQ02505 3323 aa12.61□□□□□ -0.39
CTDSPL2-203ENST00000558791 CABYRO75952 493 aa12.6□□□□□ -0.39
CTDSPL2-203ENST00000558791 GNASQ5JWF2 1037 aa12.6□□□□□ -0.39
CTDSPL2-203ENST00000558791 CCDC129Q6ZRS4 1044 aa12.6□□□□□ -0.39
CTDSPL2-203ENST00000558791 ANKRD35Q8N283 1001 aa12.6□□□□□ -0.39
CTDSPL2-203ENST00000558791 VTI1AQ96AJ9 217 aa12.6□□□□□ -0.39
CTDSPL2-203ENST00000558791 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.6□□□□□ -0.39
CTDSPL2-203ENST00000558791 SLC38A10Q9HBR0 1119 aa12.6□□□□□ -0.39
CTDSPL2-203ENST00000558791 MSRAQ9UJ68 235 aa12.6□□□□□ -0.39
CTDSPL2-203ENST00000558791 APBB1O00213 710 aa12.59□□□□□ -0.39
CTDSPL2-203ENST00000558791 NDUFB10O96000 172 aa12.59□□□□□ -0.39
CTDSPL2-203ENST00000558791 GNAT2P19087 354 aa12.59□□□□□ -0.39
CTDSPL2-203ENST00000558791 RASA1P20936 1047 aa12.59□□□□□ -0.39
CTDSPL2-203ENST00000558791 CCDC144BQ3MJ40 725 aa12.59□□□□□ -0.39
CTDSPL2-203ENST00000558791 PPP4R3BQ5MIZ7 849 aa12.59□□□□□ -0.39
CTDSPL2-203ENST00000558791 FAM126BQ8IXS8 530 aa12.59□□□□□ -0.39
CTDSPL2-203ENST00000558791 ZNF444Q8N0Y2 327 aaPredicted RBP12.59□□□□□ -0.39
CTDSPL2-203ENST00000558791 PANK1Q8TE04 598 aa12.59□□□□□ -0.39
CTDSPL2-203ENST00000558791 HERVK_113Q902F9 699 aa12.59□□□□□ -0.39
CTDSPL2-203ENST00000558791 LENG1Q96BZ8 264 aaPredicted RBP12.59□□□□□ -0.39
CTDSPL2-203ENST00000558791 STRBPQ96SI9 672 aaKnown RBP12.59□□□□□ -0.39
CTDSPL2-203ENST00000558791 PBX4Q9BYU1 374 aa12.59□□□□□ -0.39
CTDSPL2-203ENST00000558791 PUS7LQ9H0K6 701 aaKnown RBP12.59□□□□□ -0.39
CTDSPL2-203ENST00000558791 IL23AQ9NPF7 189 aa12.59□□□□□ -0.39
CTDSPL2-203ENST00000558791 ZBTB40Q9NUA8 1239 aa12.59□□□□□ -0.39
CTDSPL2-203ENST00000558791 THEGQ9P2T0 379 aa12.59□□□□□ -0.39
CTDSPL2-203ENST00000558791 RIPK3Q9Y572 518 aa12.59□□□□□ -0.39
CTDSPL2-203ENST00000558791 ZEB2O60315 1214 aa12.58□□□□□ -0.4
CTDSPL2-203ENST00000558791 HNRNPUQ00839 825 aaKnown RBP eCLIP12.58□□□□□ -0.4
CTDSPL2-203ENST00000558791 LRRFIP1Q32MZ4 808 aaKnown RBP12.58□□□□□ -0.4
CTDSPL2-203ENST00000558791 TKFCQ3LXA3 575 aa12.58□□□□□ -0.4
CTDSPL2-203ENST00000558791 C16orf59Q7L2K0 433 aa12.58□□□□□ -0.4
CTDSPL2-203ENST00000558791 ARMCX2Q7L311 632 aa12.58□□□□□ -0.4
CTDSPL2-203ENST00000558791 CPXCR1Q8N123 301 aa12.58□□□□□ -0.4
CTDSPL2-203ENST00000558791 SLC43A3Q8NBI5 491 aa12.58□□□□□ -0.4
CTDSPL2-203ENST00000558791 GMCL1P1Q8NEA9 526 aa12.58□□□□□ -0.4
CTDSPL2-203ENST00000558791 CLIP2Q9UDT6 1046 aa12.58□□□□□ -0.4
CTDSPL2-203ENST00000558791 CHD9Q3L8U1 2897 aa12.58□□□□□ -0.4
CTDSPL2-203ENST00000558791 IGKV6D-41A0A0C4DH26 115 aa12.57□□□□□ -0.4
CTDSPL2-203ENST00000558791 ASB14A6NK59 587 aa12.57□□□□□ -0.4
CTDSPL2-203ENST00000558791 GSG1L2A8MUP6 293 aa12.57□□□□□ -0.4
CTDSPL2-203ENST00000558791 SMIM22K7EJ46 135 aa12.57□□□□□ -0.4
CTDSPL2-203ENST00000558791 TTLL1O95922 423 aa12.57□□□□□ -0.4
CTDSPL2-203ENST00000558791 CD4P01730 458 aa12.57□□□□□ -0.4
CTDSPL2-203ENST00000558791 FGBP02675 491 aa12.57□□□□□ -0.4
CTDSPL2-203ENST00000558791 ZFYP08048 801 aaPredicted RBP12.57□□□□□ -0.4
CTDSPL2-203ENST00000558791 CSF2RAP15509 400 aa12.57□□□□□ -0.4
CTDSPL2-203ENST00000558791 MRPS5P82675 430 aaKnown RBP12.57□□□□□ -0.4
CTDSPL2-203ENST00000558791 SLFNL1Q499Z3 407 aa12.57□□□□□ -0.4
CTDSPL2-203ENST00000558791 ZNF365Q70YC5 407 aa12.57□□□□□ -0.4
CTDSPL2-203ENST00000558791 SIRT2Q8IXJ6 389 aa12.57□□□□□ -0.4
CTDSPL2-203ENST00000558791 USP38Q8NB14 1042 aa12.57□□□□□ -0.4
CTDSPL2-203ENST00000558791 CHURC1Q8WUH1 139 aa12.57□□□□□ -0.4
CTDSPL2-203ENST00000558791 KIFC2Q96AC6 838 aa12.57□□□□□ -0.4
CTDSPL2-203ENST00000558791 ASB2Q96Q27 587 aa12.57□□□□□ -0.4
CTDSPL2-203ENST00000558791 NUP88Q99567 741 aaPredicted RBP12.57□□□□□ -0.4
CTDSPL2-203ENST00000558791 LRRCC1Q9C099 1032 aa12.57□□□□□ -0.4
CTDSPL2-203ENST00000558791 TSPYL2Q9H2G4 693 aaPredicted RBP12.57□□□□□ -0.4
CTDSPL2-203ENST00000558791 MTMR4Q9NYA4 1195 aa12.57□□□□□ -0.4
CTDSPL2-203ENST00000558791 Q9Y3F1 56 aa12.57□□□□□ -0.4
CTDSPL2-203ENST00000558791 GBF1Q92538 1859 aa12.57□□□□□ -0.4
CTDSPL2-203ENST00000558791 BDP1A6H8Y1 2624 aa12.56□□□□□ -0.4
CTDSPL2-203ENST00000558791 MYADML2A6NDP7 307 aa12.56□□□□□ -0.4
CTDSPL2-203ENST00000558791 HAX1O00165 279 aa12.56□□□□□ -0.4
CTDSPL2-203ENST00000558791 PLA2G6O60733 806 aa12.56□□□□□ -0.4
CTDSPL2-203ENST00000558791 TNFAIP2Q03169 654 aa12.56□□□□□ -0.4
CTDSPL2-203ENST00000558791 FAM160B2Q86V87 743 aa12.56□□□□□ -0.4
CTDSPL2-203ENST00000558791 CCDC144CPQ8IYA2 1237 aa12.56□□□□□ -0.4
CTDSPL2-203ENST00000558791 RPUSD2Q8IZ73 545 aaKnown RBP12.56□□□□□ -0.4
CTDSPL2-203ENST00000558791 KBTBD3Q8NAB2 608 aa12.56□□□□□ -0.4
CTDSPL2-203ENST00000558791 APPBP2Q92624 585 aa12.56□□□□□ -0.4
CTDSPL2-203ENST00000558791 FGD4Q96M96 766 aa12.56□□□□□ -0.4
CTDSPL2-203ENST00000558791 KATNBL1Q9H079 304 aa12.56□□□□□ -0.4
CTDSPL2-203ENST00000558791 PRDM12Q9H4Q4 367 aa12.56□□□□□ -0.4
CTDSPL2-203ENST00000558791 ACAD9Q9H845 621 aa12.56□□□□□ -0.4
CTDSPL2-203ENST00000558791 SLC28A3Q9HAS3 691 aa12.56□□□□□ -0.4
CTDSPL2-203ENST00000558791 RAVER2Q9HCJ3 691 aaKnown RBP12.56□□□□□ -0.4
CTDSPL2-203ENST00000558791 PLIN4Q96Q06 1357 aa12.56□□□□□ -0.4
CTDSPL2-203ENST00000558791 MINDY4BA8MYZ0 360 aa12.55□□□□□ -0.4
CTDSPL2-203ENST00000558791 CTAGE5O15320 804 aa12.55□□□□□ -0.4
CTDSPL2-203ENST00000558791 BMP3P12645 472 aa12.55□□□□□ -0.4
CTDSPL2-203ENST00000558791 COL9A1P20849 921 aa12.55□□□□□ -0.4
CTDSPL2-203ENST00000558791 SLC4A3P48751 1232 aa12.55□□□□□ -0.4
CTDSPL2-203ENST00000558791 STAT2P52630 851 aa12.55□□□□□ -0.4
CTDSPL2-203ENST00000558791 PDE4BQ07343 736 aa12.55□□□□□ -0.4
CTDSPL2-203ENST00000558791 IQSEC1Q6DN90 963 aa12.55□□□□□ -0.4
CTDSPL2-203ENST00000558791 FAM133AQ8N9E0 248 aa12.55□□□□□ -0.4
CTDSPL2-203ENST00000558791 IL27Q8NEV9 243 aa12.55□□□□□ -0.4
CTDSPL2-203ENST00000558791 GPATCH3Q96I76 525 aa12.55□□□□□ -0.4
CTDSPL2-203ENST00000558791 PPP1R12CQ9BZL4 782 aa12.55□□□□□ -0.4
CTDSPL2-203ENST00000558791 AP5M1Q9H0R1 490 aa12.55□□□□□ -0.4
CTDSPL2-203ENST00000558791 HIPK3Q9H422 1215 aa12.55□□□□□ -0.4
CTDSPL2-203ENST00000558791 ECHDC1Q9NTX5 307 aa12.55□□□□□ -0.4
CTDSPL2-203ENST00000558791 LOC102724159A0A0B4J2E5 919 aa12.54□□□□□ -0.4
CTDSPL2-203ENST00000558791 ADCY6O43306 1168 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms