RNA–Protein interactions for RNA: ENST00000558768.5

TRPM1-208, Transcript of transient receptor potential cation channel subfamily M member 1, human

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,581 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRPM1-208	ENST00000558768	OR8K1	Q8NGG5	319 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	PPWD1	Q96BP3	646 aa	Known RBP	10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	THOC1	Q96FV9	657 aa	Known RBP	10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	PSMB7	Q99436	277 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	NOC4L	Q9BVI4	516 aa	Known RBP	10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	EPC1	Q9H2F5	836 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	DUX4	Q9UBX2	424 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	ATP11B	Q9Y2G3	1177 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	GOLGA8Q	A0A0J9YX86	632 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	GOLGA8O	A6NCC3	632 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	GOLGA8N	F8WBI6	632 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	CRCP	O75575	148 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	ESRRB	O95718	433 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	KRT3	P12035	628 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	NNT	Q13423	1086 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	CWF19L2	Q2TBE0	894 aa	Known RBP	10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	ARHGEF18	Q6ZSZ5	1173 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	LZIC	Q8WZA0	190 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	KIFC3	Q9BVG8	833 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	BAG5	Q9UL15	447 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	LZTS1	Q9Y250	596 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	PNPLA6	Q8IY17	1366 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	CEP55	Q53EZ4	464 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	TMTC3	Q6ZXV5	915 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	TMTC2	Q8N394	836 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	TMCO5A	Q8N6Q1	288 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	LRGUK	Q96M69	825 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	FUT8	Q9BYC5	575 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	UBAP1	Q9NZ09	502 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	TRPC5	Q9UL62	973 aa	Predicted RBP	10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	COPG1	Q9Y678	874 aa	Known RBP	10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	TARBP1	Q13395	1621 aa	Known RBP	10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	TEX9	Q8N6V9	391 aa		10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	ERMN	Q8TAM6	284 aa		10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	IFIH1	Q9BYX4	1025 aa	Known RBP	10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	FANCL	Q9NW38	375 aa		10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	MYO5C	Q9NQX4	1742 aa		10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	ZBTB43	O43298	467 aa		10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	SPAG7	O75391	227 aa		10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	MCF2	P10911	925 aa		10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	HNRNPLL	Q8WVV9	542 aa	Known RBP	10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	SPC25	Q9HBM1	224 aa		10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	TMOD2	Q9NZR1	351 aa		10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	ABCC1	P33527	1531 aa		10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	MAP3K4	Q9Y6R4	1608 aa		10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	CUTA	O60888	179 aa		10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	DNAJC6	O75061	913 aa		10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	DEAF1	O75398	565 aa	Predicted RBP	10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	KRT5	P13647	590 aa		10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	MTHFSD	Q2M296	383 aa	Known RBP	10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	ANKRD35	Q8N283	1001 aa		10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	SCHIP1	Q9P0W5	487 aa	Predicted RBP	10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	PA2G4	Q9UQ80	394 aa	Known RBP	10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	PARP3	Q9Y6F1	533 aa		10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	ZBBX	A8MT70	800 aa		10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	PFKFB1	P16118	471 aa		10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	KRT4	P19013	534 aa		10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	RPS6KA2	Q15349	733 aa		10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	THAP11	Q96EK4	314 aa		10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	TYW1	Q9NV66	732 aa	Known RBP	10.57	□□□□□ -0.72
TRPM1-208	ENST00000558768	MINDY4B	A8MYZ0	360 aa		10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	PSMC1	P62191	440 aa	Known RBP	10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	MYSM1	Q5VVJ2	828 aa		10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	MCF2L2	Q86YR7	1114 aa		10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	TRIM42	Q8IWZ5	723 aa		10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	BABAM1	Q9NWV8	329 aa		10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	CD2AP	Q9Y5K6	639 aa		10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	NPAT	Q14207	1427 aa		10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	SH3BP5	O60239	455 aa		10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	TMCC1	O94876	653 aa		10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	MSH2	P43246	934 aa		10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	MLEC	Q14165	292 aa		10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	NAIF1	Q69YI7	327 aa	Predicted RBP	10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	TXNDC2	Q86VQ3	553 aa		10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	SESTD1	Q86VW0	696 aa		10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	SUGP1	Q8IWZ8	645 aa	Known RBP	10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	IL17RA	Q96F46	866 aa		10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	SH3BP1	Q9Y3L3	701 aa		10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	RPL13	P26373	211 aa	Known RBP	10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	TPP2	P29144	1249 aa	Predicted RBP	10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	PDE6C	P51160	858 aa		10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	NLRP6	P59044	892 aa		10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	ZBTB10	Q96DT7	871 aa		10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	POLR3C	Q9BUI4	534 aa	Predicted RBP	10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	VPS37B	Q9H9H4	285 aa		10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	STMN3	Q9NZ72	180 aa		10.56	□□□□□ -0.72
TRPM1-208	ENST00000558768	WBP4	O75554	376 aa	Known RBP	10.55	□□□□□ -0.72
TRPM1-208	ENST00000558768	ESRRA	P11474	423 aa	Predicted RBP	10.55	□□□□□ -0.72
TRPM1-208	ENST00000558768	TNFAIP3	P21580	790 aa		10.55	□□□□□ -0.72
TRPM1-208	ENST00000558768	GUCY2D	Q02846	1103 aa		10.55	□□□□□ -0.72
TRPM1-208	ENST00000558768	RSPH3	Q86UC2	560 aa		10.55	□□□□□ -0.72
TRPM1-208	ENST00000558768	RNF217	Q8TC41	542 aa		10.55	□□□□□ -0.72
TRPM1-208	ENST00000558768	FTO	Q9C0B1	505 aa	Known RBP eCLIP	10.55	□□□□□ -0.72
TRPM1-208	ENST00000558768	KCNH3	Q9ULD8	1083 aa		10.55	□□□□□ -0.72
TRPM1-208	ENST00000558768	ARHGEF10	O15013	1369 aa		10.55	□□□□□ -0.72
TRPM1-208	ENST00000558768	YTHDC2	Q9H6S0	1430 aa	Known RBP	10.55	□□□□□ -0.72
TRPM1-208	ENST00000558768	ABCA8	O94911	1581 aa		10.55	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms