RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 FEM1BQ9UK73 627 aa18.11■□□□□ 0.49
RPL28-206ENST00000558752 ELP1O95163 1332 aa18.11■□□□□ 0.49
RPL28-206ENST00000558752 DNAH12Q6ZR08 3092 aa18.1■□□□□ 0.49
RPL28-206ENST00000558752 SYNRGQ9UMZ2 1314 aa18.1■□□□□ 0.49
RPL28-206ENST00000558752 SLC4A3P48751 1232 aa18.1■□□□□ 0.49
RPL28-206ENST00000558752 PPP4R3BQ5MIZ7 849 aa18.1■□□□□ 0.49
RPL28-206ENST00000558752 KLHDC9Q8NEP7 349 aa18.1■□□□□ 0.49
RPL28-206ENST00000558752 PRDM6Q9NQX0 595 aa18.1■□□□□ 0.49
RPL28-206ENST00000558752 CLIP2Q9UDT6 1046 aa18.1■□□□□ 0.49
RPL28-206ENST00000558752 CDH23Q9H251 3354 aa18.1■□□□□ 0.49
RPL28-206ENST00000558752 PRUNE2Q8WUY3 3088 aa18.09■□□□□ 0.49
RPL28-206ENST00000558752 DNAJC25-GNG10A0A024R161 153 aa18.09■□□□□ 0.49
RPL28-206ENST00000558752 TRIM6-TRIM34B2RNG4 842 aa18.09■□□□□ 0.49
RPL28-206ENST00000558752 SMIM22K7EJ46 135 aa18.09■□□□□ 0.49
RPL28-206ENST00000558752 TLR3O15455 904 aaKnown RBP18.09■□□□□ 0.49
RPL28-206ENST00000558752 SNAI1O95863 264 aaPredicted RBP18.09■□□□□ 0.49
RPL28-206ENST00000558752 NDUFB10O96000 172 aa18.09■□□□□ 0.49
RPL28-206ENST00000558752 TIMP1P01033 207 aa18.09■□□□□ 0.49
RPL28-206ENST00000558752 C6orf222P0C671 652 aaPredicted RBP18.09■□□□□ 0.49
RPL28-206ENST00000558752 CST5P28325 142 aaPredicted RBP18.09■□□□□ 0.49
RPL28-206ENST00000558752 PDE4BQ07343 736 aa18.09■□□□□ 0.49
RPL28-206ENST00000558752 FAAP100Q0VG06 881 aa18.09■□□□□ 0.49
RPL28-206ENST00000558752 PPIGQ13427 754 aaKnown RBP eCLIP18.09■□□□□ 0.49
RPL28-206ENST00000558752 ACVR2BQ13705 512 aa18.09■□□□□ 0.49
RPL28-206ENST00000558752 KCNA10Q16322 511 aa18.09■□□□□ 0.49
RPL28-206ENST00000558752 MCMDC2Q4G0Z9 681 aa18.09■□□□□ 0.49
RPL28-206ENST00000558752 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.09■□□□□ 0.49
RPL28-206ENST00000558752 MKL1Q969V6 931 aa18.09■□□□□ 0.49
RPL28-206ENST00000558752 KIFC2Q96AC6 838 aa18.09■□□□□ 0.49
RPL28-206ENST00000558752 SEC62Q99442 399 aaKnown RBP18.09■□□□□ 0.49
RPL28-206ENST00000558752 NUP88Q99567 741 aaPredicted RBP18.09■□□□□ 0.49
RPL28-206ENST00000558752 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.09■□□□□ 0.49
RPL28-206ENST00000558752 NAPBQ9H115 298 aa18.09■□□□□ 0.49
RPL28-206ENST00000558752 TTLL1O95922 423 aa18.08■□□□□ 0.48
RPL28-206ENST00000558752 ITGB8P26012 769 aa18.08■□□□□ 0.48
RPL28-206ENST00000558752 MFAP1P55081 439 aaKnown RBP18.08■□□□□ 0.48
RPL28-206ENST00000558752 ALX1Q15699 326 aa18.08■□□□□ 0.48
RPL28-206ENST00000558752 STK11IPQ8N1F8 1099 aa18.08■□□□□ 0.48
RPL28-206ENST00000558752 SLC38A10Q9HBR0 1119 aa18.08■□□□□ 0.48
RPL28-206ENST00000558752 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.08■□□□□ 0.48
RPL28-206ENST00000558752 A0A0U1RQG5 324 aaPredicted RBP18.07■□□□□ 0.48
RPL28-206ENST00000558752 HIP1O00291 1037 aa18.07■□□□□ 0.48
RPL28-206ENST00000558752 MFSD5Q6N075 450 aa18.07■□□□□ 0.48
RPL28-206ENST00000558752 TMEM199Q8N511 208 aa18.07■□□□□ 0.48
RPL28-206ENST00000558752 GMCL1P1Q8NEA9 526 aa18.07■□□□□ 0.48
RPL28-206ENST00000558752 RILPL2Q969X0 211 aa18.07■□□□□ 0.48
RPL28-206ENST00000558752 EPB41L4AQ9HCS5 686 aaPredicted RBP18.07■□□□□ 0.48
RPL28-206ENST00000558752 RAPGEFL1Q9UHV5 662 aa18.07■□□□□ 0.48
RPL28-206ENST00000558752 RIPK3Q9Y572 518 aa18.07■□□□□ 0.48
RPL28-206ENST00000558752 TSPY3P0CV98 308 aa18.06■□□□□ 0.48
RPL28-206ENST00000558752 TSPY8P0CW00 308 aa18.06■□□□□ 0.48
RPL28-206ENST00000558752 GJA9P57773 515 aa18.06■□□□□ 0.48
RPL28-206ENST00000558752 CCDC144BQ3MJ40 725 aa18.06■□□□□ 0.48
RPL28-206ENST00000558752 GNASQ5JWF2 1037 aa18.06■□□□□ 0.48
RPL28-206ENST00000558752 CHURC1Q8WUH1 139 aa18.06■□□□□ 0.48
RPL28-206ENST00000558752 LENG1Q96BZ8 264 aaPredicted RBP18.06■□□□□ 0.48
RPL28-206ENST00000558752 SEZ6LQ9BYH1 1024 aa18.06■□□□□ 0.48
RPL28-206ENST00000558752 RAVER2Q9HCJ3 691 aaKnown RBP18.06■□□□□ 0.48
RPL28-206ENST00000558752 MTMR4Q9NYA4 1195 aa18.06■□□□□ 0.48
RPL28-206ENST00000558752 ISY1Q9ULR0 285 aaKnown RBP18.06■□□□□ 0.48
RPL28-206ENST00000558752 GREB1LQ9C091 1923 aaPredicted RBP18.06■□□□□ 0.48
RPL28-206ENST00000558752 IGKV6D-41A0A0C4DH26 115 aa18.05■□□□□ 0.48
RPL28-206ENST00000558752 ARVCFO00192 962 aa18.05■□□□□ 0.48
RPL28-206ENST00000558752 ASGR1P07306 291 aa18.05■□□□□ 0.48
RPL28-206ENST00000558752 BMP3P12645 472 aa18.05■□□□□ 0.48
RPL28-206ENST00000558752 DNAJB2P25686 324 aa18.05■□□□□ 0.48
RPL28-206ENST00000558752 CCSAPQ6IQ19 270 aaPredicted RBP18.05■□□□□ 0.48
RPL28-206ENST00000558752 PSRC1Q6PGN9 363 aaPredicted RBP18.05■□□□□ 0.48
RPL28-206ENST00000558752 ARMCX2Q7L311 632 aa18.05■□□□□ 0.48
RPL28-206ENST00000558752 FAM160B2Q86V87 743 aa18.05■□□□□ 0.48
RPL28-206ENST00000558752 CEP95Q96GE4 821 aa18.05■□□□□ 0.48
RPL28-206ENST00000558752 UPF3AQ9H1J1 476 aaKnown RBP18.05■□□□□ 0.48
RPL28-206ENST00000558752 MTIF3Q9H2K0 278 aaKnown RBP18.05■□□□□ 0.48
RPL28-206ENST00000558752 ACAD9Q9H845 621 aa18.05■□□□□ 0.48
RPL28-206ENST00000558752 TBX21Q9UL17 535 aa18.05■□□□□ 0.48
RPL28-206ENST00000558752 ASB14A6NK59 587 aa18.04■□□□□ 0.48
RPL28-206ENST00000558752 ZEB2O60315 1214 aa18.04■□□□□ 0.48
RPL28-206ENST00000558752 CABYRO75952 493 aa18.04■□□□□ 0.48
RPL28-206ENST00000558752 SDSP20132 328 aa18.04■□□□□ 0.48
RPL28-206ENST00000558752 CDK7P50613 346 aa18.04■□□□□ 0.48
RPL28-206ENST00000558752 STAT2P52630 851 aa18.04■□□□□ 0.48
RPL28-206ENST00000558752 EPHB4P54760 987 aa18.04■□□□□ 0.48
RPL28-206ENST00000558752 PPARAQ07869 468 aa18.04■□□□□ 0.48
RPL28-206ENST00000558752 TKFCQ3LXA3 575 aa18.04■□□□□ 0.48
RPL28-206ENST00000558752 SLFN13Q68D06 897 aa18.04■□□□□ 0.48
RPL28-206ENST00000558752 CCDC129Q6ZRS4 1044 aa18.04■□□□□ 0.48
RPL28-206ENST00000558752 NOL8Q76FK4 1167 aaKnown RBP18.04■□□□□ 0.48
RPL28-206ENST00000558752 NEDD1Q8NHV4 660 aa18.04■□□□□ 0.48
RPL28-206ENST00000558752 TIFAQ96CG3 184 aa18.04■□□□□ 0.48
RPL28-206ENST00000558752 ZNF576Q9H609 170 aa18.04■□□□□ 0.48
RPL28-206ENST00000558752 ANAPC4Q9UJX5 808 aa18.04■□□□□ 0.48
RPL28-206ENST00000558752 PRDM1O75626 825 aa18.03■□□□□ 0.48
RPL28-206ENST00000558752 IRX6P78412 446 aaPredicted RBP18.03■□□□□ 0.48
RPL28-206ENST00000558752 IKQ13123 557 aaPredicted RBP18.03■□□□□ 0.48
RPL28-206ENST00000558752 USP38Q8NB14 1042 aa18.03■□□□□ 0.48
RPL28-206ENST00000558752 FAM227BQ96M60 508 aa18.03■□□□□ 0.48
RPL28-206ENST00000558752 GAS2L1Q99501 681 aaPredicted RBP18.03■□□□□ 0.48
RPL28-206ENST00000558752 MYH4Q9Y623 1939 aa18.03■□□□□ 0.48
RPL28-206ENST00000558752 TTC28Q96AY4 2481 aa18.03■□□□□ 0.48
RPL28-206ENST00000558752 TMEM232C9JQI7 657 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms