RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 MFSD6Q6ZSS7 791 aa10.37□□□□□ -0.75
SNRPA1-206ENST00000558059 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.37□□□□□ -0.75
SNRPA1-206ENST00000558059 RASGRP2Q7LDG7 609 aa10.37□□□□□ -0.75
SNRPA1-206ENST00000558059 NECAB2Q7Z6G3 386 aa10.37□□□□□ -0.75
SNRPA1-206ENST00000558059 CPXCR1Q8N123 301 aa10.37□□□□□ -0.75
SNRPA1-206ENST00000558059 CHURC1Q8WUH1 139 aa10.37□□□□□ -0.75
SNRPA1-206ENST00000558059 DPF3Q92784 378 aa10.37□□□□□ -0.75
SNRPA1-206ENST00000558059 MAML3Q96JK9 1138 aa10.37□□□□□ -0.75
SNRPA1-206ENST00000558059 MMP19Q99542 508 aa10.37□□□□□ -0.75
SNRPA1-206ENST00000558059 TMEM47Q9BQJ4 181 aa10.37□□□□□ -0.75
SNRPA1-206ENST00000558059 HTATIP2Q9BUP3 242 aa10.37□□□□□ -0.75
SNRPA1-206ENST00000558059 RAVER2Q9HCJ3 691 aaKnown RBP10.37□□□□□ -0.75
SNRPA1-206ENST00000558059 SLC5A4Q9NY91 659 aa10.37□□□□□ -0.75
SNRPA1-206ENST00000558059 NEDD4P46934 1319 aa10.36□□□□□ -0.75
SNRPA1-206ENST00000558059 H0YGN5 161 aa10.36□□□□□ -0.75
SNRPA1-206ENST00000558059 ZNF213O14771 459 aa10.36□□□□□ -0.75
SNRPA1-206ENST00000558059 FDX1P10109 184 aa10.36□□□□□ -0.75
SNRPA1-206ENST00000558059 TOP1P11387 765 aaKnown RBP10.36□□□□□ -0.75
SNRPA1-206ENST00000558059 CHMLP26374 656 aa10.36□□□□□ -0.75
SNRPA1-206ENST00000558059 STAT2P52630 851 aa10.36□□□□□ -0.75
SNRPA1-206ENST00000558059 OAZ1P54368 228 aa10.36□□□□□ -0.75
SNRPA1-206ENST00000558059 ZNF792Q3KQV3 632 aa10.36□□□□□ -0.75
SNRPA1-206ENST00000558059 PRAMEF19Q5SWL8 479 aa10.36□□□□□ -0.75
SNRPA1-206ENST00000558059 KCTD1Q719H9 257 aa10.36□□□□□ -0.75
SNRPA1-206ENST00000558059 FAM160B2Q86V87 743 aa10.36□□□□□ -0.75
SNRPA1-206ENST00000558059 RNF41Q9H4P4 317 aaPredicted RBP10.36□□□□□ -0.75
SNRPA1-206ENST00000558059 OCEL1Q9H607 264 aa10.36□□□□□ -0.75
SNRPA1-206ENST00000558059 DDX20Q9UHI6 824 aaKnown RBP10.36□□□□□ -0.75
SNRPA1-206ENST00000558059 DIS3Q9Y2L1 958 aaKnown RBP10.36□□□□□ -0.75
SNRPA1-206ENST00000558059 ZNF536O15090 1300 aa10.35□□□□□ -0.75
SNRPA1-206ENST00000558059 DNAJC25-GNG10A0A024R161 153 aa10.35□□□□□ -0.75
SNRPA1-206ENST00000558059 PYGBP11216 843 aa10.35□□□□□ -0.75
SNRPA1-206ENST00000558059 SLC4A3P48751 1232 aa10.35□□□□□ -0.75
SNRPA1-206ENST00000558059 KCTD2Q14681 263 aa10.35□□□□□ -0.75
SNRPA1-206ENST00000558059 TTBK2Q6IQ55 1244 aa10.35□□□□□ -0.75
SNRPA1-206ENST00000558059 BTNL9Q6UXG8 535 aa10.35□□□□□ -0.75
SNRPA1-206ENST00000558059 DCAF4Q8WV16 495 aa10.35□□□□□ -0.75
SNRPA1-206ENST00000558059 TTC14Q96N46 770 aa10.35□□□□□ -0.75
SNRPA1-206ENST00000558059 TINF2Q9BSI4 451 aa10.35□□□□□ -0.75
SNRPA1-206ENST00000558059 CTNNA3Q9UI47 895 aa10.35□□□□□ -0.75
SNRPA1-206ENST00000558059 PRR12Q9ULL5 1215 aa10.35□□□□□ -0.75
SNRPA1-206ENST00000558059 ISY1Q9ULR0 285 aaKnown RBP10.35□□□□□ -0.75
SNRPA1-206ENST00000558059 MTMR7Q9Y216 660 aa10.35□□□□□ -0.75
SNRPA1-206ENST00000558059 CTDP1Q9Y5B0 961 aaPredicted RBP10.35□□□□□ -0.75
SNRPA1-206ENST00000558059 PFASO15067 1338 aa10.34□□□□□ -0.75
SNRPA1-206ENST00000558059 MSCO60682 206 aa10.34□□□□□ -0.75
SNRPA1-206ENST00000558059 COL6A1P12109 1028 aa10.34□□□□□ -0.75
SNRPA1-206ENST00000558059 CNGA1P29973 690 aa10.34□□□□□ -0.75
SNRPA1-206ENST00000558059 NT5C2P49902 561 aa10.34□□□□□ -0.75
SNRPA1-206ENST00000558059 SNAP25P60880 206 aa10.34□□□□□ -0.75
SNRPA1-206ENST00000558059 IKQ13123 557 aaPredicted RBP10.34□□□□□ -0.75
SNRPA1-206ENST00000558059 IMMTQ16891 758 aaKnown RBP10.34□□□□□ -0.75
SNRPA1-206ENST00000558059 CCDC96Q2M329 555 aa10.34□□□□□ -0.75
SNRPA1-206ENST00000558059 CHST13Q8NET6 341 aa10.34□□□□□ -0.75
SNRPA1-206ENST00000558059 ANKS1AQ92625 1134 aa10.34□□□□□ -0.75
SNRPA1-206ENST00000558059 ESR2Q92731 530 aa10.34□□□□□ -0.75
SNRPA1-206ENST00000558059 AGBL1Q96MI9 1066 aa10.34□□□□□ -0.75
SNRPA1-206ENST00000558059 ZKSCAN3Q9BRR0 538 aa10.34□□□□□ -0.75
SNRPA1-206ENST00000558059 C11orf49Q9H6J7 331 aa10.34□□□□□ -0.75
SNRPA1-206ENST00000558059 RAD50Q92878 1312 aa10.33□□□□□ -0.76
SNRPA1-206ENST00000558059 B4E1Z4 1266 aa10.33□□□□□ -0.76
SNRPA1-206ENST00000558059 SGSM2O43147 1006 aa10.33□□□□□ -0.76
SNRPA1-206ENST00000558059 SEPT4O43236 478 aa10.33□□□□□ -0.76
SNRPA1-206ENST00000558059 EVI5O60447 810 aa10.33□□□□□ -0.76
SNRPA1-206ENST00000558059 KDM4AO75164 1064 aa10.33□□□□□ -0.76
SNRPA1-206ENST00000558059 SNHG28P0DPA3 235 aa10.33□□□□□ -0.76
SNRPA1-206ENST00000558059 PDHBP11177 359 aa10.33□□□□□ -0.76
SNRPA1-206ENST00000558059 TAL1P17542 331 aaPredicted RBP10.33□□□□□ -0.76
SNRPA1-206ENST00000558059 SLC16A2P36021 539 aa10.33□□□□□ -0.76
SNRPA1-206ENST00000558059 PTH1RQ03431 593 aa10.33□□□□□ -0.76
SNRPA1-206ENST00000558059 ANO1Q5XXA6 986 aa10.33□□□□□ -0.76
SNRPA1-206ENST00000558059 CCDC174Q6PII3 467 aa10.33□□□□□ -0.76
SNRPA1-206ENST00000558059 MAMDC4Q6UXC1 1216 aa10.33□□□□□ -0.76
SNRPA1-206ENST00000558059 DGKHQ86XP1 1220 aa10.33□□□□□ -0.76
SNRPA1-206ENST00000558059 RUFY2Q8WXA3 655 aa10.33□□□□□ -0.76
SNRPA1-206ENST00000558059 DDX11Q96FC9 970 aa10.33□□□□□ -0.76
SNRPA1-206ENST00000558059 FGD4Q96M96 766 aa10.33□□□□□ -0.76
SNRPA1-206ENST00000558059 GPCPD1Q9NPB8 672 aa10.33□□□□□ -0.76
SNRPA1-206ENST00000558059 HOMER2Q9NSB8 354 aa10.33□□□□□ -0.76
SNRPA1-206ENST00000558059 ZSWIM5Q9P217 1185 aa10.33□□□□□ -0.76
SNRPA1-206ENST00000558059 FBXO40Q9UH90 709 aa10.33□□□□□ -0.76
SNRPA1-206ENST00000558059 NRBP1Q9UHY1 535 aa10.33□□□□□ -0.76
SNRPA1-206ENST00000558059 NR2E3Q9Y5X4 410 aa10.33□□□□□ -0.76
SNRPA1-206ENST00000558059 BAZ2BQ9UIF8 2168 aaKnown RBP10.33□□□□□ -0.76
SNRPA1-206ENST00000558059 FRMPD2Q68DX3 1309 aaPredicted RBP10.33□□□□□ -0.76
SNRPA1-206ENST00000558059 SNAI1O95863 264 aaPredicted RBP10.32□□□□□ -0.76
SNRPA1-206ENST00000558059 ZNF865P0CJ78 1059 aaPredicted RBP10.32□□□□□ -0.76
SNRPA1-206ENST00000558059 ZNF543Q08ER8 600 aa10.32□□□□□ -0.76
SNRPA1-206ENST00000558059 TKFCQ3LXA3 575 aa10.32□□□□□ -0.76
SNRPA1-206ENST00000558059 CCDC178Q5BJE1 867 aa10.32□□□□□ -0.76
SNRPA1-206ENST00000558059 SYDE2Q5VT97 1194 aa10.32□□□□□ -0.76
SNRPA1-206ENST00000558059 ZNF467Q7Z7K2 595 aaPredicted RBP10.32□□□□□ -0.76
SNRPA1-206ENST00000558059 SKAP1Q86WV1 359 aa10.32□□□□□ -0.76
SNRPA1-206ENST00000558059 ANKRD35Q8N283 1001 aa10.32□□□□□ -0.76
SNRPA1-206ENST00000558059 MSL3Q8N5Y2 521 aaKnown RBP10.32□□□□□ -0.76
SNRPA1-206ENST00000558059 TRERF1Q96PN7 1200 aa10.32□□□□□ -0.76
SNRPA1-206ENST00000558059 TMEM121BQ9BXQ6 578 aaPredicted RBP10.32□□□□□ -0.76
SNRPA1-206ENST00000558059 RANBP17Q9H2T7 1088 aaKnown RBP10.32□□□□□ -0.76
SNRPA1-206ENST00000558059 ACAD9Q9H845 621 aa10.32□□□□□ -0.76
SNRPA1-206ENST00000558059 RNF146Q9NTX7 359 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms