RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 B4E1Z4 1266 aa19.65■□□□□ 0.74
NEDD4-212ENST00000557845 PDHBP11177 359 aa19.65■□□□□ 0.74
NEDD4-212ENST00000557845 SLC16A2P36021 539 aa19.65■□□□□ 0.74
NEDD4-212ENST00000557845 TKFCQ3LXA3 575 aa19.65■□□□□ 0.74
NEDD4-212ENST00000557845 CCDC178Q5BJE1 867 aa19.65■□□□□ 0.74
NEDD4-212ENST00000557845 CCDC174Q6PII3 467 aa19.65■□□□□ 0.74
NEDD4-212ENST00000557845 MAMDC4Q6UXC1 1216 aa19.65■□□□□ 0.74
NEDD4-212ENST00000557845 ZNF467Q7Z7K2 595 aaPredicted RBP19.65■□□□□ 0.74
NEDD4-212ENST00000557845 IQCA1Q86XH1 822 aa19.65■□□□□ 0.74
NEDD4-212ENST00000557845 ARRDC4Q8NCT1 418 aa19.65■□□□□ 0.74
NEDD4-212ENST00000557845 TRERF1Q96PN7 1200 aa19.65■□□□□ 0.74
NEDD4-212ENST00000557845 ACAD9Q9H845 621 aa19.65■□□□□ 0.74
NEDD4-212ENST00000557845 GPCPD1Q9NPB8 672 aa19.65■□□□□ 0.74
NEDD4-212ENST00000557845 FRMPD2Q68DX3 1309 aaPredicted RBP19.65■□□□□ 0.74
NEDD4-212ENST00000557845 DNM1LO00429 736 aa19.64■□□□□ 0.73
NEDD4-212ENST00000557845 ALAS1P13196 640 aa19.64■□□□□ 0.73
NEDD4-212ENST00000557845 TAL1P17542 331 aaPredicted RBP19.64■□□□□ 0.73
NEDD4-212ENST00000557845 KRT23Q9C075 422 aa19.64■□□□□ 0.73
NEDD4-212ENST00000557845 RNF146Q9NTX7 359 aa19.64■□□□□ 0.73
NEDD4-212ENST00000557845 SYNGAP1Q96PV0 1343 aa19.63■□□□□ 0.73
NEDD4-212ENST00000557845 SNAI1O95863 264 aaPredicted RBP19.63■□□□□ 0.73
NEDD4-212ENST00000557845 ZNF865P0CJ78 1059 aaPredicted RBP19.63■□□□□ 0.73
NEDD4-212ENST00000557845 SNHG28P0DPA3 235 aa19.63■□□□□ 0.73
NEDD4-212ENST00000557845 GJC2Q5T442 439 aaPredicted RBP19.63■□□□□ 0.73
NEDD4-212ENST00000557845 SYDE2Q5VT97 1194 aa19.63■□□□□ 0.73
NEDD4-212ENST00000557845 CHRDL2Q6WN34 429 aa19.63■□□□□ 0.73
NEDD4-212ENST00000557845 C7orf61Q8IZ16 206 aa19.63■□□□□ 0.73
NEDD4-212ENST00000557845 ANKS1AQ92625 1134 aa19.63■□□□□ 0.73
NEDD4-212ENST00000557845 ZSCAN10Q96SZ4 725 aaPredicted RBP19.63■□□□□ 0.73
NEDD4-212ENST00000557845 SENP6Q9GZR1 1112 aaPredicted RBP19.63■□□□□ 0.73
NEDD4-212ENST00000557845 RANBP17Q9H2T7 1088 aaKnown RBP19.63■□□□□ 0.73
NEDD4-212ENST00000557845 CNNM2Q9H8M5 875 aa19.63■□□□□ 0.73
NEDD4-212ENST00000557845 CNPY2Q9Y2B0 182 aa19.63■□□□□ 0.73
NEDD4-212ENST00000557845 ICAM1P05362 532 aa19.62■□□□□ 0.73
NEDD4-212ENST00000557845 PTH1RQ03431 593 aa19.62■□□□□ 0.73
NEDD4-212ENST00000557845 ZNF543Q08ER8 600 aa19.62■□□□□ 0.73
NEDD4-212ENST00000557845 FGD4Q96M96 766 aa19.62■□□□□ 0.73
NEDD4-212ENST00000557845 A1CFQ9NQ94 594 aaKnown RBP19.62■□□□□ 0.73
NEDD4-212ENST00000557845 SGSM2O43147 1006 aa19.61■□□□□ 0.73
NEDD4-212ENST00000557845 RARBP10826 455 aa19.61■□□□□ 0.73
NEDD4-212ENST00000557845 CNTN2Q02246 1040 aa19.61■□□□□ 0.73
NEDD4-212ENST00000557845 LRRC26Q2I0M4 334 aa19.61■□□□□ 0.73
NEDD4-212ENST00000557845 MUM1L1Q5H9M0 696 aa19.61■□□□□ 0.73
NEDD4-212ENST00000557845 FAM133AQ8N9E0 248 aa19.61■□□□□ 0.73
NEDD4-212ENST00000557845 CCPG1Q9ULG6 757 aa19.61■□□□□ 0.73
NEDD4-212ENST00000557845 POTEB2H3BUK9 544 aa19.6■□□□□ 0.73
NEDD4-212ENST00000557845 SLC34A2O95436 690 aa19.6■□□□□ 0.73
NEDD4-212ENST00000557845 MYCNP04198 464 aaPredicted RBP19.6■□□□□ 0.73
NEDD4-212ENST00000557845 AKR1A1P14550 325 aa19.6■□□□□ 0.73
NEDD4-212ENST00000557845 LRRC41Q15345 812 aa19.6■□□□□ 0.73
NEDD4-212ENST00000557845 ENAHQ8N8S7 591 aaPredicted RBP19.6■□□□□ 0.73
NEDD4-212ENST00000557845 PNMA1Q8ND90 353 aa19.6■□□□□ 0.73
NEDD4-212ENST00000557845 KAT14Q9H8E8 782 aa19.6■□□□□ 0.73
NEDD4-212ENST00000557845 XPNPEP3Q9NQH7 507 aa19.6■□□□□ 0.73
NEDD4-212ENST00000557845 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.6■□□□□ 0.73
NEDD4-212ENST00000557845 RBM27Q9P2N5 1060 aaKnown RBP19.6■□□□□ 0.73
NEDD4-212ENST00000557845 U3KPZ7 1027 aaPredicted RBP19.6■□□□□ 0.73
NEDD4-212ENST00000557845 MCM3APO60318 1980 aa19.59■□□□□ 0.73
NEDD4-212ENST00000557845 TNKSO95271 1327 aa19.59■□□□□ 0.73
NEDD4-212ENST00000557845 KBTBD13C9JR72 458 aa19.59■□□□□ 0.73
NEDD4-212ENST00000557845 CYP21A2P08686 494 aa19.59■□□□□ 0.73
NEDD4-212ENST00000557845 GOLGA8HP0CJ92 632 aa19.59■□□□□ 0.73
NEDD4-212ENST00000557845 ACVR2BQ13705 512 aa19.59■□□□□ 0.73
NEDD4-212ENST00000557845 GPATCH4Q5T3I0 446 aaKnown RBP19.59■□□□□ 0.73
NEDD4-212ENST00000557845 CENPQQ7L2Z9 268 aaPredicted RBP19.59■□□□□ 0.73
NEDD4-212ENST00000557845 PRO3102Q9H379 93 aa19.59■□□□□ 0.73
NEDD4-212ENST00000557845 ABHD16BQ9H3Z7 469 aa19.59■□□□□ 0.73
NEDD4-212ENST00000557845 FAM184BQ9ULE4 1060 aa19.59■□□□□ 0.73
NEDD4-212ENST00000557845 ZMYND8Q9ULU4 1186 aaPredicted RBP19.59■□□□□ 0.73
NEDD4-212ENST00000557845 SOWAHBA6NEL2 793 aa19.58■□□□□ 0.72
NEDD4-212ENST00000557845 ARMCX2Q7L311 632 aa19.58■□□□□ 0.72
NEDD4-212ENST00000557845 CCDC144CPQ8IYA2 1237 aa19.58■□□□□ 0.72
NEDD4-212ENST00000557845 MAP4K1Q92918 833 aa19.58■□□□□ 0.72
NEDD4-212ENST00000557845 UBAC1Q9BSL1 405 aa19.58■□□□□ 0.72
NEDD4-212ENST00000557845 UBA5Q9GZZ9 404 aa19.58■□□□□ 0.72
NEDD4-212ENST00000557845 CYP39A1Q9NYL5 469 aa19.58■□□□□ 0.72
NEDD4-212ENST00000557845 ZHX1Q9UKY1 873 aaPredicted RBP19.58■□□□□ 0.72
NEDD4-212ENST00000557845 PGK1P00558 417 aa19.57■□□□□ 0.72
NEDD4-212ENST00000557845 SYN1P17600 705 aa19.57■□□□□ 0.72
NEDD4-212ENST00000557845 ATN1P54259 1190 aaPredicted RBP19.57■□□□□ 0.72
NEDD4-212ENST00000557845 TRDNQ13061 729 aa19.57■□□□□ 0.72
NEDD4-212ENST00000557845 NSMFQ6X4W1 530 aa19.57■□□□□ 0.72
NEDD4-212ENST00000557845 SLC39A5Q6ZMH5 540 aa19.57■□□□□ 0.72
NEDD4-212ENST00000557845 CYB5R4Q7L1T6 521 aa19.57■□□□□ 0.72
NEDD4-212ENST00000557845 PNMA2Q9UL42 364 aa19.57■□□□□ 0.72
NEDD4-212ENST00000557845 ASB14A6NK59 587 aa19.56■□□□□ 0.72
NEDD4-212ENST00000557845 ADCYAP1R1P41586 468 aa19.56■□□□□ 0.72
NEDD4-212ENST00000557845 SEC23AQ15436 765 aa19.56■□□□□ 0.72
NEDD4-212ENST00000557845 IFIT1BQ5T764 474 aaKnown RBP19.56■□□□□ 0.72
NEDD4-212ENST00000557845 RNF180Q86T96 592 aa19.56■□□□□ 0.72
NEDD4-212ENST00000557845 CPVLQ9H3G5 476 aa19.56■□□□□ 0.72
NEDD4-212ENST00000557845 DUSP11O75319 330 aaKnown RBP19.55■□□□□ 0.72
NEDD4-212ENST00000557845 BAATQ14032 418 aaPredicted RBP19.55■□□□□ 0.72
NEDD4-212ENST00000557845 CCDC144BQ3MJ40 725 aa19.55■□□□□ 0.72
NEDD4-212ENST00000557845 SKAP1Q86WV1 359 aa19.55■□□□□ 0.72
NEDD4-212ENST00000557845 FERMT2Q96AC1 680 aa19.55■□□□□ 0.72
NEDD4-212ENST00000557845 LENG1Q96BZ8 264 aaPredicted RBP19.55■□□□□ 0.72
NEDD4-212ENST00000557845 KATNBL1Q9H079 304 aa19.55■□□□□ 0.72
NEDD4-212ENST00000557845 DNAH12Q6ZR08 3092 aa19.55■□□□□ 0.72
NEDD4-212ENST00000557845 ASTN1O14525 1302 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms