RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 CST5P28325 142 aaPredicted RBP18.97■□□□□ 0.63
SCFD1-224ENST00000557713 IRX5P78411 483 aaPredicted RBP18.97■□□□□ 0.63
SCFD1-224ENST00000557713 PPARAQ07869 468 aa18.97■□□□□ 0.63
SCFD1-224ENST00000557713 NAPBQ9H115 298 aa18.97■□□□□ 0.63
SCFD1-224ENST00000557713 DCDC2CA8MYV0 355 aa18.96■□□□□ 0.63
SCFD1-224ENST00000557713 SLC3A2P08195 630 aaKnown RBP18.96■□□□□ 0.63
SCFD1-224ENST00000557713 CDK7P50613 346 aa18.96■□□□□ 0.63
SCFD1-224ENST00000557713 GJA9P57773 515 aa18.96■□□□□ 0.63
SCFD1-224ENST00000557713 CCDC144BQ3MJ40 725 aa18.96■□□□□ 0.63
SCFD1-224ENST00000557713 GMCL1Q96IK5 515 aa18.96■□□□□ 0.63
SCFD1-224ENST00000557713 FSD1Q9BTV5 496 aa18.96■□□□□ 0.63
SCFD1-224ENST00000557713 KATNBL1Q9H079 304 aa18.96■□□□□ 0.63
SCFD1-224ENST00000557713 UPF3AQ9H1J1 476 aaKnown RBP18.96■□□□□ 0.63
SCFD1-224ENST00000557713 TTYH1Q9H313 450 aaPredicted RBP18.96■□□□□ 0.63
SCFD1-224ENST00000557713 ZNF536O15090 1300 aa18.96■□□□□ 0.63
SCFD1-224ENST00000557713 ELP1O95163 1332 aa18.96■□□□□ 0.63
SCFD1-224ENST00000557713 FOXP2O15409 715 aa18.95■□□□□ 0.62
SCFD1-224ENST00000557713 CNTN2Q02246 1040 aa18.95■□□□□ 0.62
SCFD1-224ENST00000557713 FPGSQ05932 587 aa18.95■□□□□ 0.62
SCFD1-224ENST00000557713 ARMCX2Q7L311 632 aa18.95■□□□□ 0.62
SCFD1-224ENST00000557713 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.95■□□□□ 0.62
SCFD1-224ENST00000557713 CCDC144CPQ8IYA2 1237 aa18.95■□□□□ 0.62
SCFD1-224ENST00000557713 FAM133AQ8N9E0 248 aa18.95■□□□□ 0.62
SCFD1-224ENST00000557713 PCSK9Q8NBP7 692 aaKnown RBP18.95■□□□□ 0.62
SCFD1-224ENST00000557713 CHURC1Q8WUH1 139 aa18.95■□□□□ 0.62
SCFD1-224ENST00000557713 STAG1Q8WVM7 1258 aa18.95■□□□□ 0.62
SCFD1-224ENST00000557713 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.95■□□□□ 0.62
SCFD1-224ENST00000557713 UNC80Q8N2C7 3258 aa18.94■□□□□ 0.62
SCFD1-224ENST00000557713 CTAGE5O15320 804 aa18.94■□□□□ 0.62
SCFD1-224ENST00000557713 PLA2G6O60733 806 aa18.94■□□□□ 0.62
SCFD1-224ENST00000557713 ASGR1P07306 291 aa18.94■□□□□ 0.62
SCFD1-224ENST00000557713 C6orf222P0C671 652 aaPredicted RBP18.94■□□□□ 0.62
SCFD1-224ENST00000557713 MX1P20591 662 aa18.94■□□□□ 0.62
SCFD1-224ENST00000557713 MCCP23508 829 aa18.94■□□□□ 0.62
SCFD1-224ENST00000557713 STAT2P52630 851 aa18.94■□□□□ 0.62
SCFD1-224ENST00000557713 NKX3-2P78367 333 aa18.94■□□□□ 0.62
SCFD1-224ENST00000557713 FAM160B2Q86V87 743 aa18.94■□□□□ 0.62
SCFD1-224ENST00000557713 RNPC3Q96LT9 517 aaKnown RBP18.94■□□□□ 0.62
SCFD1-224ENST00000557713 AGBL1Q96MI9 1066 aa18.94■□□□□ 0.62
SCFD1-224ENST00000557713 GLT1D1Q96MS3 346 aa18.94■□□□□ 0.62
SCFD1-224ENST00000557713 ACAD9Q9H845 621 aa18.94■□□□□ 0.62
SCFD1-224ENST00000557713 INCENPQ9NQS7 918 aa18.94■□□□□ 0.62
SCFD1-224ENST00000557713 IL17RBQ9NRM6 502 aa18.94■□□□□ 0.62
SCFD1-224ENST00000557713 HOMER2Q9NSB8 354 aa18.94■□□□□ 0.62
SCFD1-224ENST00000557713 TBX21Q9UL17 535 aa18.94■□□□□ 0.62
SCFD1-224ENST00000557713 SALL3Q9BXA9 1300 aa18.94■□□□□ 0.62
SCFD1-224ENST00000557713 TIMP1P01033 207 aa18.93■□□□□ 0.62
SCFD1-224ENST00000557713 SLC1A4P43007 532 aa18.93■□□□□ 0.62
SCFD1-224ENST00000557713 RCSD1Q6JBY9 416 aa18.93■□□□□ 0.62
SCFD1-224ENST00000557713 CCDC129Q6ZRS4 1044 aa18.93■□□□□ 0.62
SCFD1-224ENST00000557713 SPC25Q9HBM1 224 aa18.93■□□□□ 0.62
SCFD1-224ENST00000557713 A1CFQ9NQ94 594 aaKnown RBP18.93■□□□□ 0.62
SCFD1-224ENST00000557713 SOWAHBA6NEL2 793 aa18.92■□□□□ 0.62
SCFD1-224ENST00000557713 CTDSPL2Q05D32 466 aa18.92■□□□□ 0.62
SCFD1-224ENST00000557713 TKFCQ3LXA3 575 aa18.92■□□□□ 0.62
SCFD1-224ENST00000557713 GNASQ5JWF2 1037 aa18.92■□□□□ 0.62
SCFD1-224ENST00000557713 PPP4R3BQ5MIZ7 849 aa18.92■□□□□ 0.62
SCFD1-224ENST00000557713 TRERF1Q96PN7 1200 aa18.92■□□□□ 0.62
SCFD1-224ENST00000557713 COL25A1Q9BXS0 654 aaPredicted RBP18.92■□□□□ 0.62
SCFD1-224ENST00000557713 RNF146Q9NTX7 359 aa18.92■□□□□ 0.62
SCFD1-224ENST00000557713 MROH7Q68CQ1 1323 aa18.92■□□□□ 0.62
SCFD1-224ENST00000557713 TMEM265A0A087WTH1 108 aa18.91■□□□□ 0.62
SCFD1-224ENST00000557713 ARVCFO00192 962 aa18.91■□□□□ 0.62
SCFD1-224ENST00000557713 NMT2O60551 498 aa18.91■□□□□ 0.62
SCFD1-224ENST00000557713 NOVP48745 357 aa18.91■□□□□ 0.62
SCFD1-224ENST00000557713 MFSD5Q6N075 450 aa18.91■□□□□ 0.62
SCFD1-224ENST00000557713 KCTD1Q719H9 257 aa18.91■□□□□ 0.62
SCFD1-224ENST00000557713 MYLIPQ8WY64 445 aa18.91■□□□□ 0.62
SCFD1-224ENST00000557713 CHMP4CQ96CF2 233 aa18.91■□□□□ 0.62
SCFD1-224ENST00000557713 ANAPC4Q9UJX5 808 aa18.91■□□□□ 0.62
SCFD1-224ENST00000557713 ISY1Q9ULR0 285 aaKnown RBP18.91■□□□□ 0.62
SCFD1-224ENST00000557713 STX8Q9UNK0 236 aa18.91■□□□□ 0.62
SCFD1-224ENST00000557713 A0A0U1RQG5 324 aaPredicted RBP18.9■□□□□ 0.62
SCFD1-224ENST00000557713 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.9■□□□□ 0.62
SCFD1-224ENST00000557713 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.9■□□□□ 0.62
SCFD1-224ENST00000557713 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.9■□□□□ 0.62
SCFD1-224ENST00000557713 ASB14A6NK59 587 aa18.9■□□□□ 0.62
SCFD1-224ENST00000557713 TSPY2A6NKD2 308 aa18.9■□□□□ 0.62
SCFD1-224ENST00000557713 FGRP09769 529 aa18.9■□□□□ 0.62
SCFD1-224ENST00000557713 TNFAIP2Q03169 654 aa18.9■□□□□ 0.62
SCFD1-224ENST00000557713 IKQ13123 557 aaPredicted RBP18.9■□□□□ 0.62
SCFD1-224ENST00000557713 VPS53Q5VIR6 699 aa18.9■□□□□ 0.62
SCFD1-224ENST00000557713 C16orf59Q7L2K0 433 aa18.9■□□□□ 0.62
SCFD1-224ENST00000557713 VTI1AQ96AJ9 217 aa18.9■□□□□ 0.62
SCFD1-224ENST00000557713 PRR12Q9ULL5 1215 aa18.9■□□□□ 0.62
SCFD1-224ENST00000557713 ASTN1O14525 1302 aa18.9■□□□□ 0.62
SCFD1-224ENST00000557713 ALAS1P13196 640 aa18.89■□□□□ 0.61
SCFD1-224ENST00000557713 SNAP25P60880 206 aa18.89■□□□□ 0.61
SCFD1-224ENST00000557713 RASGRP2Q7LDG7 609 aa18.89■□□□□ 0.61
SCFD1-224ENST00000557713 FAM126BQ8IXS8 530 aa18.89■□□□□ 0.61
SCFD1-224ENST00000557713 MAFAQ8NHW3 353 aaPredicted RBP18.89■□□□□ 0.61
SCFD1-224ENST00000557713 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.89■□□□□ 0.612e-9■□□□□ 9.9
SCFD1-224ENST00000557713 GNEQ9Y223 722 aaKnown RBP18.89■□□□□ 0.61
SCFD1-224ENST00000557713 MCM3APO60318 1980 aa18.89■□□□□ 0.61
SCFD1-224ENST00000557713 CUL9Q8IWT3 2517 aa18.88■□□□□ 0.61
SCFD1-224ENST00000557713 ORC4O43929 436 aa18.88■□□□□ 0.61
SCFD1-224ENST00000557713 CD4P01730 458 aa18.88■□□□□ 0.61
SCFD1-224ENST00000557713 BEX3Q00994 111 aa18.88■□□□□ 0.61
SCFD1-224ENST00000557713 ALX1Q15699 326 aa18.88■□□□□ 0.61
SCFD1-224ENST00000557713 MUM1L1Q5H9M0 696 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms