RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 RMDN1Q96DB5 314 aa16.25■□□□□ 0.19
TMEM260-215ENST00000557626 NOL10Q9BSC4 688 aaKnown RBP16.25■□□□□ 0.19
TMEM260-215ENST00000557626 ZBED2Q9BTP6 218 aa16.25■□□□□ 0.19
TMEM260-215ENST00000557626 SEZ6LQ9BYH1 1024 aa16.25■□□□□ 0.19
TMEM260-215ENST00000557626 PALD1Q9ULE6 856 aa16.25■□□□□ 0.19
TMEM260-215ENST00000557626 FRYLO94915 3013 aa16.24■□□□□ 0.19
TMEM260-215ENST00000557626 FLT1P17948 1338 aa16.24■□□□□ 0.19
TMEM260-215ENST00000557626 EP300Q09472 2414 aaPredicted RBP16.24■□□□□ 0.19
TMEM260-215ENST00000557626 APAF1O14727 1248 aa16.24■□□□□ 0.19
TMEM260-215ENST00000557626 SNAI1O95863 264 aaPredicted RBP16.24■□□□□ 0.19
TMEM260-215ENST00000557626 SMAD2Q15796 467 aaKnown RBP16.24■□□□□ 0.19
TMEM260-215ENST00000557626 NBPF20Q3BBV1 942 aa16.24■□□□□ 0.19
TMEM260-215ENST00000557626 TIGD5Q53EQ6 642 aa16.24■□□□□ 0.19
TMEM260-215ENST00000557626 NSUN4Q96CB9 384 aaKnown RBP16.24■□□□□ 0.19
TMEM260-215ENST00000557626 FTOQ9C0B1 505 aaKnown RBP eCLIP16.24■□□□□ 0.19
TMEM260-215ENST00000557626 SIL1Q9H173 461 aa16.24■□□□□ 0.19
TMEM260-215ENST00000557626 CTNNA3Q9UI47 895 aa16.24■□□□□ 0.19
TMEM260-215ENST00000557626 DSG3P32926 999 aa16.23■□□□□ 0.19
TMEM260-215ENST00000557626 RFC2P35250 354 aa16.23■□□□□ 0.19
TMEM260-215ENST00000557626 BEX3Q00994 111 aa16.23■□□□□ 0.19
TMEM260-215ENST00000557626 TGFBRAP1Q8WUH2 860 aa16.23■□□□□ 0.19
TMEM260-215ENST00000557626 ATG4CQ96DT6 458 aa16.23■□□□□ 0.19
TMEM260-215ENST00000557626 MRPL38Q96DV4 380 aaKnown RBP16.23■□□□□ 0.19
TMEM260-215ENST00000557626 TET1Q8NFU7 2136 aa16.22■□□□□ 0.19
TMEM260-215ENST00000557626 MCM3APO60318 1980 aa16.22■□□□□ 0.19
TMEM260-215ENST00000557626 USP24Q9UPU5 2620 aa16.22■□□□□ 0.19
TMEM260-215ENST00000557626 CTAGE5O15320 804 aa16.22■□□□□ 0.19
TMEM260-215ENST00000557626 GALR2O43603 387 aaPredicted RBP16.22■□□□□ 0.19
TMEM260-215ENST00000557626 BAIAP3O94812 1187 aa16.22■□□□□ 0.19
TMEM260-215ENST00000557626 ADORA1P30542 326 aa16.22■□□□□ 0.19
TMEM260-215ENST00000557626 NUBP1P53384 320 aa16.22■□□□□ 0.19
TMEM260-215ENST00000557626 ACVR2BQ13705 512 aa16.22■□□□□ 0.19
TMEM260-215ENST00000557626 PTPROQ16827 1216 aa16.22■□□□□ 0.19
TMEM260-215ENST00000557626 CCDC144BQ3MJ40 725 aa16.22■□□□□ 0.19
TMEM260-215ENST00000557626 ATG9AQ7Z3C6 839 aa16.22■□□□□ 0.19
TMEM260-215ENST00000557626 CLDND1Q9NY35 253 aa16.22■□□□□ 0.19
TMEM260-215ENST00000557626 CEP126Q9P2H0 1117 aa16.22■□□□□ 0.19
TMEM260-215ENST00000557626 SAP30BPQ9UHR5 308 aaKnown RBP16.22■□□□□ 0.19
TMEM260-215ENST00000557626 TANC1Q9C0D5 1861 aa16.22■□□□□ 0.19
TMEM260-215ENST00000557626 GRIN2DO15399 1336 aa16.21■□□□□ 0.19
TMEM260-215ENST00000557626 FLOT1O75955 427 aa16.21■□□□□ 0.19
TMEM260-215ENST00000557626 SIGLEC14Q08ET2 396 aa16.21■□□□□ 0.19
TMEM260-215ENST00000557626 ST3GAL2Q16842 350 aa16.21■□□□□ 0.19
TMEM260-215ENST00000557626 ABCB5Q2M3G0 1257 aa16.21■□□□□ 0.19
TMEM260-215ENST00000557626 MCTP2Q6DN12 878 aa16.21■□□□□ 0.19
TMEM260-215ENST00000557626 FBXO22Q8NEZ5 403 aa16.21■□□□□ 0.19
TMEM260-215ENST00000557626 RAI14Q9P0K7 980 aa16.21■□□□□ 0.19
TMEM260-215ENST00000557626 TNKSO95271 1327 aa16.2■□□□□ 0.18
TMEM260-215ENST00000557626 PARP14Q460N5 1801 aa16.2■□□□□ 0.18
TMEM260-215ENST00000557626 LINC01553A4QN01 128 aa16.2■□□□□ 0.18
TMEM260-215ENST00000557626 STXBP3O00186 592 aa16.2■□□□□ 0.18
TMEM260-215ENST00000557626 CYP2C9P11712 490 aa16.2■□□□□ 0.18
TMEM260-215ENST00000557626 PLCG2P16885 1265 aa16.2■□□□□ 0.18
TMEM260-215ENST00000557626 TMEM132BQ14DG7 1078 aa16.2■□□□□ 0.18
TMEM260-215ENST00000557626 CLUL1Q15846 466 aa16.2■□□□□ 0.18
TMEM260-215ENST00000557626 TCEAL5Q5H9L2 206 aa16.2■□□□□ 0.18
TMEM260-215ENST00000557626 MAMDC4Q6UXC1 1216 aa16.2■□□□□ 0.18
TMEM260-215ENST00000557626 FRMD5Q7Z6J6 570 aa16.2■□□□□ 0.18
TMEM260-215ENST00000557626 TMCO2Q7Z6W1 182 aaPredicted RBP16.2■□□□□ 0.18
TMEM260-215ENST00000557626 BANK1Q8NDB2 785 aa16.2■□□□□ 0.18
TMEM260-215ENST00000557626 CRBNQ96SW2 442 aa16.2■□□□□ 0.18
TMEM260-215ENST00000557626 CABP5Q9NP86 173 aa16.2■□□□□ 0.18
TMEM260-215ENST00000557626 AATFQ9NY61 560 aaKnown RBP eCLIP16.2■□□□□ 0.18
TMEM260-215ENST00000557626 CEP250Q9BV73 2442 aa16.2■□□□□ 0.18
TMEM260-215ENST00000557626 FAM208BQ5VWN6 2430 aa16.19■□□□□ 0.18
TMEM260-215ENST00000557626 FASNP49327 2511 aaKnown RBP16.19■□□□□ 0.18
TMEM260-215ENST00000557626 MBTPS2O43462 519 aa16.19■□□□□ 0.18
TMEM260-215ENST00000557626 BAG3O95817 575 aa16.19■□□□□ 0.18
TMEM260-215ENST00000557626 SUPT20HL2P0C7V6 817 aa16.19■□□□□ 0.18
TMEM260-215ENST00000557626 COL19A1Q14993 1142 aa16.19■□□□□ 0.18
TMEM260-215ENST00000557626 CERKLQ49MI3 558 aaPredicted RBP16.19■□□□□ 0.18
TMEM260-215ENST00000557626 TATDN1Q6P1N9 297 aa16.19■□□□□ 0.18
TMEM260-215ENST00000557626 RIOX2Q8IUF8 465 aa16.19■□□□□ 0.18
TMEM260-215ENST00000557626 ALDH8A1Q9H2A2 487 aaPredicted RBP16.19■□□□□ 0.18
TMEM260-215ENST00000557626 SPTBN2O15020 2390 aa16.19■□□□□ 0.18
TMEM260-215ENST00000557626 MYH1P12882 1939 aa16.18■□□□□ 0.18
TMEM260-215ENST00000557626 WDR5P61964 334 aaKnown RBP16.18■□□□□ 0.18
TMEM260-215ENST00000557626 PSMC6P62333 389 aa16.18■□□□□ 0.18
TMEM260-215ENST00000557626 NKX3-2P78367 333 aa16.18■□□□□ 0.18
TMEM260-215ENST00000557626 PUM1Q14671 1186 aaKnown RBP eCLIP16.18■□□□□ 0.18
TMEM260-215ENST00000557626 RPAINQ86UA6 219 aa16.18■□□□□ 0.18
TMEM260-215ENST00000557626 RAD9AQ99638 391 aa16.18■□□□□ 0.18
TMEM260-215ENST00000557626 ABHD16BQ9H3Z7 469 aa16.18■□□□□ 0.18
TMEM260-215ENST00000557626 TRMT13Q9NUP7 481 aaKnown RBP16.18■□□□□ 0.18
TMEM260-215ENST00000557626 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.18■□□□□ 0.18
TMEM260-215ENST00000557626 MYO7AQ13402 2215 aa16.17■□□□□ 0.18
TMEM260-215ENST00000557626 ZEB2O60315 1214 aa16.17■□□□□ 0.18
TMEM260-215ENST00000557626 RFX5P48382 616 aaPredicted RBP16.17■□□□□ 0.18
TMEM260-215ENST00000557626 ACAP1Q15027 740 aa16.17■□□□□ 0.18
TMEM260-215ENST00000557626 FSCN1Q16658 493 aaKnown RBP16.17■□□□□ 0.18
TMEM260-215ENST00000557626 NOL8Q76FK4 1167 aaKnown RBP16.17■□□□□ 0.18
TMEM260-215ENST00000557626 ASIC4Q96FT7 647 aa16.17■□□□□ 0.18
TMEM260-215ENST00000557626 A0A1B0GUL7 405 aa16.16■□□□□ 0.18
TMEM260-215ENST00000557626 COPB2P35606 906 aa16.16■□□□□ 0.18
TMEM260-215ENST00000557626 LTBRP36941 435 aa16.16■□□□□ 0.18
TMEM260-215ENST00000557626 SMAD4Q13485 552 aaKnown RBP16.16■□□□□ 0.18
TMEM260-215ENST00000557626 CCDC27Q2M243 656 aa16.16■□□□□ 0.18
TMEM260-215ENST00000557626 TBC1D9Q6ZT07 1266 aa16.16■□□□□ 0.18
TMEM260-215ENST00000557626 C17orf80Q9BSJ5 609 aa16.16■□□□□ 0.18
TMEM260-215ENST00000557626 NSUN3Q9H649 340 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms