RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 ARMCX2Q7L311 632 aa22■■□□□ 1.11
ABCD4-228ENST00000557588 UHRF1Q96T88 793 aaPredicted RBP22■■□□□ 1.11
ABCD4-228ENST00000557588 HAUS7Q99871 368 aa22■■□□□ 1.11
ABCD4-228ENST00000557588 MTIF3Q9H2K0 278 aaKnown RBP22■■□□□ 1.11
ABCD4-228ENST00000557588 BOLA2Q9H3K6 86 aa22■■□□□ 1.11
ABCD4-228ENST00000557588 NYAP2Q9P242 653 aa22■■□□□ 1.11
ABCD4-228ENST00000557588 MSRAQ9UJ68 235 aa22■■□□□ 1.11
ABCD4-228ENST00000557588 REV3LO60673 3130 aa22■■□□□ 1.11
ABCD4-228ENST00000557588 F5H6K3 240 aa21.99■■□□□ 1.11
ABCD4-228ENST00000557588 APBB1O00213 710 aa21.99■■□□□ 1.11
ABCD4-228ENST00000557588 RASA1P20936 1047 aa21.99■■□□□ 1.11
ABCD4-228ENST00000557588 KLRC3Q07444 240 aa21.99■■□□□ 1.11
ABCD4-228ENST00000557588 CPXCR1Q8N123 301 aa21.99■■□□□ 1.11
ABCD4-228ENST00000557588 VTI1AQ96AJ9 217 aa21.99■■□□□ 1.11
ABCD4-228ENST00000557588 SLC38A10Q9HBR0 1119 aa21.99■■□□□ 1.11
ABCD4-228ENST00000557588 CXXC1Q9P0U4 656 aaPredicted RBP21.99■■□□□ 1.11
ABCD4-228ENST00000557588 FBXO40Q9UH90 709 aa21.99■■□□□ 1.11
ABCD4-228ENST00000557588 RAPGEFL1Q9UHV5 662 aa21.99■■□□□ 1.11
ABCD4-228ENST00000557588 ZBED4O75132 1171 aa21.98■■□□□ 1.11
ABCD4-228ENST00000557588 CYP2C18P33260 490 aa21.98■■□□□ 1.11
ABCD4-228ENST00000557588 ANKRD35Q8N283 1001 aa21.98■■□□□ 1.11
ABCD4-228ENST00000557588 SLC43A3Q8NBI5 491 aa21.98■■□□□ 1.11
ABCD4-228ENST00000557588 OAZ1P54368 228 aa21.97■■□□□ 1.11
ABCD4-228ENST00000557588 CHST13Q8NET6 341 aa21.97■■□□□ 1.11
ABCD4-228ENST00000557588 PUS7LQ9H0K6 701 aaKnown RBP21.97■■□□□ 1.11
ABCD4-228ENST00000557588 NKX2-4Q9H2Z4 354 aa21.97■■□□□ 1.11
ABCD4-228ENST00000557588 RAVER2Q9HCJ3 691 aaKnown RBP21.97■■□□□ 1.11
ABCD4-228ENST00000557588 YBX2Q9Y2T7 364 aaKnown RBP21.97■■□□□ 1.11
ABCD4-228ENST00000557588 IGKV6D-41A0A0C4DH26 115 aa21.96■■□□□ 1.11
ABCD4-228ENST00000557588 RAB11FIP3O75154 756 aa21.96■■□□□ 1.11
ABCD4-228ENST00000557588 IGFBP4P22692 258 aa21.96■■□□□ 1.11
ABCD4-228ENST00000557588 PLA2G5P39877 138 aa21.96■■□□□ 1.11
ABCD4-228ENST00000557588 CCDC85BQ15834 202 aaPredicted RBP21.96■■□□□ 1.11
ABCD4-228ENST00000557588 SBK1Q52WX2 424 aa21.96■■□□□ 1.11
ABCD4-228ENST00000557588 CCDC144CPQ8IYA2 1237 aa21.96■■□□□ 1.11
ABCD4-228ENST00000557588 PANK1Q8TE04 598 aa21.96■■□□□ 1.11
ABCD4-228ENST00000557588 HIPK3Q9H422 1215 aa21.96■■□□□ 1.11
ABCD4-228ENST00000557588 SLC28A3Q9HAS3 691 aa21.96■■□□□ 1.11
ABCD4-228ENST00000557588 SYNPO2Q9UMS6 1093 aa21.96■■□□□ 1.11
ABCD4-228ENST00000557588 TRANK1O15050 2925 aa21.95■■□□□ 1.1
ABCD4-228ENST00000557588 HMMRO75330 724 aa21.95■■□□□ 1.1
ABCD4-228ENST00000557588 CABYRO75952 493 aa21.95■■□□□ 1.1
ABCD4-228ENST00000557588 FGBP02675 491 aa21.95■■□□□ 1.1
ABCD4-228ENST00000557588 SLC4A3P48751 1232 aa21.95■■□□□ 1.1
ABCD4-228ENST00000557588 ZSCAN25Q6NSZ9 544 aa21.95■■□□□ 1.1
ABCD4-228ENST00000557588 RPAP2Q8IXW5 612 aaPredicted RBP21.95■■□□□ 1.1
ABCD4-228ENST00000557588 IL27Q8NEV9 243 aa21.95■■□□□ 1.1
ABCD4-228ENST00000557588 KIFC2Q96AC6 838 aa21.95■■□□□ 1.1
ABCD4-228ENST00000557588 CTDP1Q9Y5B0 961 aaPredicted RBP21.95■■□□□ 1.1
ABCD4-228ENST00000557588 ASTN1O14525 1302 aa21.95■■□□□ 1.1
ABCD4-228ENST00000557588 BEX3Q00994 111 aa21.94■■□□□ 1.1
ABCD4-228ENST00000557588 GIMAP6Q6P9H5 292 aa21.94■■□□□ 1.1
ABCD4-228ENST00000557588 CXCL17Q6UXB2 119 aa21.94■■□□□ 1.1
ABCD4-228ENST00000557588 SIRT2Q8IXJ6 389 aa21.94■■□□□ 1.1
ABCD4-228ENST00000557588 FAM133AQ8N9E0 248 aa21.94■■□□□ 1.1
ABCD4-228ENST00000557588 SEZ6LQ9BYH1 1024 aa21.94■■□□□ 1.1
ABCD4-228ENST00000557588 MKNK2Q9HBH9 465 aa21.94■■□□□ 1.1
ABCD4-228ENST00000557588 FEM1BQ9UK73 627 aa21.94■■□□□ 1.1
ABCD4-228ENST00000557588 UMODL1Q5DID0 1318 aa21.94■■□□□ 1.1
ABCD4-228ENST00000557588 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.93■■□□□ 1.1
ABCD4-228ENST00000557588 TNFAIP2Q03169 654 aa21.93■■□□□ 1.1
ABCD4-228ENST00000557588 OTOP2Q7RTS6 562 aa21.93■■□□□ 1.1
ABCD4-228ENST00000557588 STRBPQ96SI9 672 aaKnown RBP21.93■■□□□ 1.1
ABCD4-228ENST00000557588 NOC4LQ9BVI4 516 aaKnown RBP21.93■■□□□ 1.1
ABCD4-228ENST00000557588 GNEQ9Y223 722 aaKnown RBP21.93■■□□□ 1.1
ABCD4-228ENST00000557588 PLIN4Q96Q06 1357 aa21.92■■□□□ 1.1
ABCD4-228ENST00000557588 TLK2Q86UE8 772 aa21.92■■□□□ 1.1
ABCD4-228ENST00000557588 GMCL1P1Q8NEA9 526 aa21.92■■□□□ 1.1
ABCD4-228ENST00000557588 MKL1Q969V6 931 aa21.92■■□□□ 1.1
ABCD4-228ENST00000557588 WNT8AQ9H1J5 351 aa21.92■■□□□ 1.1
ABCD4-228ENST00000557588 TSPYL2Q9H2G4 693 aaPredicted RBP21.92■■□□□ 1.1
ABCD4-228ENST00000557588 ACAD9Q9H845 621 aa21.92■■□□□ 1.1
ABCD4-228ENST00000557588 CLIP2Q9UDT6 1046 aa21.92■■□□□ 1.1
ABCD4-228ENST00000557588 GRIN2DO15399 1336 aa21.91■■□□□ 1.1
ABCD4-228ENST00000557588 GSG1L2A8MUP6 293 aa21.91■■□□□ 1.1
ABCD4-228ENST00000557588 FDX1P10109 184 aa21.91■■□□□ 1.1
ABCD4-228ENST00000557588 CNTN2Q02246 1040 aa21.91■■□□□ 1.1
ABCD4-228ENST00000557588 ITGA7Q13683 1181 aa21.91■■□□□ 1.1
ABCD4-228ENST00000557588 FSCN1Q16658 493 aaKnown RBP21.91■■□□□ 1.1
ABCD4-228ENST00000557588 PPP2R2DQ66LE6 453 aa21.91■■□□□ 1.1
ABCD4-228ENST00000557588 CEP95Q96GE4 821 aa21.91■■□□□ 1.1
ABCD4-228ENST00000557588 BCL11AQ9H165 835 aa21.91■■□□□ 1.1
ABCD4-228ENST00000557588 A1CFQ9NQ94 594 aaKnown RBP21.91■■□□□ 1.1
ABCD4-228ENST00000557588 PCDHA11Q9Y5I1 949 aa21.91■■□□□ 1.1
ABCD4-228ENST00000557588 LRRC47Q8N1G4 583 aaKnown RBP21.9■■□□□ 1.1
ABCD4-228ENST00000557588 HOMER2Q9NSB8 354 aa21.9■■□□□ 1.1
ABCD4-228ENST00000557588 MTMR4Q9NYA4 1195 aa21.9■■□□□ 1.1
ABCD4-228ENST00000557588 LCTP09848 1927 aa21.89■■□□□ 1.09
ABCD4-228ENST00000557588 SOWAHBA6NEL2 793 aa21.89■■□□□ 1.09
ABCD4-228ENST00000557588 ASB14A6NK59 587 aa21.89■■□□□ 1.09
ABCD4-228ENST00000557588 B4GALT4O60513 344 aa21.89■■□□□ 1.09
ABCD4-228ENST00000557588 BMP1P13497 986 aa21.89■■□□□ 1.09
ABCD4-228ENST00000557588 RABGGTBP53611 331 aa21.89■■□□□ 1.09
ABCD4-228ENST00000557588 CCL23P55773 120 aa21.89■■□□□ 1.09
ABCD4-228ENST00000557588 NOL8Q76FK4 1167 aaKnown RBP21.89■■□□□ 1.09
ABCD4-228ENST00000557588 STK11IPQ8N1F8 1099 aa21.89■■□□□ 1.09
ABCD4-228ENST00000557588 VWCEQ96DN2 955 aa21.89■■□□□ 1.09
ABCD4-228ENST00000557588 FAM122AQ96E09 287 aa21.89■■□□□ 1.09
ABCD4-228ENST00000557588 NECAB3Q96P71 396 aaPredicted RBP21.89■■□□□ 1.09
ABCD4-228ENST00000557588 C1QTNF1Q9BXJ1 281 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms