RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 LOC285556D6RIA3 1793 aa16.61■□□□□ 0.25
ARHGEF40-208ENST00000557498 ADAMTS3O15072 1205 aa16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 TRAK2O60296 914 aa16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 YEATS4O95619 227 aa16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 ADCY7P51828 1080 aa16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 HMGCS2P54868 508 aa16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 SNAP25P60880 206 aa16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 CEBPZQ03701 1054 aaKnown RBP16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 SKOR2Q2VWA4 1001 aaPredicted RBP16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 RILPL1Q5EBL4 403 aa16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 SH3D19Q5HYK7 790 aa16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 EARS2Q5JPH6 523 aaKnown RBP16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 ANO1Q5XXA6 986 aa16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 FBXO11Q86XK2 927 aa16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 ERO1BQ86YB8 467 aa16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 RBM46Q8TBY0 533 aaKnown RBP16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 BICD2Q8TD16 824 aa16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 ZNF526Q8TF50 670 aaPredicted RBP16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 CLMNQ96JQ2 1002 aa16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 SLF1Q9BQI6 1058 aa16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 TANGO6Q9C0B7 1094 aa16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 FBXO28Q9NVF7 368 aa16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 TMOD4Q9NZQ9 345 aa16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 RCOR1Q9UKL0 485 aa16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 NOL7Q9UMY1 257 aaKnown RBP16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 PCDHA6Q9UN73 950 aa16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 PCDHA8Q9Y5H6 950 aa16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 CLIC4Q9Y696 253 aa16.6■□□□□ 0.25
ARHGEF40-208ENST00000557498 FAM205CA6NFA0 338 aa16.59■□□□□ 0.25
ARHGEF40-208ENST00000557498 SPDYE5A6NIY4 337 aa16.59■□□□□ 0.25
ARHGEF40-208ENST00000557498 TOB1P50616 345 aaPredicted RBP16.59■□□□□ 0.25
ARHGEF40-208ENST00000557498 PPATQ06203 517 aa16.59■□□□□ 0.25
ARHGEF40-208ENST00000557498 TRAF1Q13077 416 aa16.59■□□□□ 0.25
ARHGEF40-208ENST00000557498 LDLRAD1Q5T700 205 aa16.59■□□□□ 0.25
ARHGEF40-208ENST00000557498 RASGRP4Q8TDF6 673 aa16.59■□□□□ 0.25
ARHGEF40-208ENST00000557498 ZNF408Q9H9D4 720 aa16.59■□□□□ 0.25
ARHGEF40-208ENST00000557498 PCDHA1Q9Y5I3 950 aa16.59■□□□□ 0.25
ARHGEF40-208ENST00000557498 UNCXA6NJT0 531 aa16.58■□□□□ 0.24
ARHGEF40-208ENST00000557498 GADD45BO75293 160 aaPredicted RBP16.58■□□□□ 0.24
ARHGEF40-208ENST00000557498 MBD3O95983 291 aa16.58■□□□□ 0.24
ARHGEF40-208ENST00000557498 UBE2HP62256 183 aa16.58■□□□□ 0.24
ARHGEF40-208ENST00000557498 FKBP1BP68106 108 aa16.58■□□□□ 0.24
ARHGEF40-208ENST00000557498 FMR1Q06787 632 aaKnown RBP eCLIP16.58■□□□□ 0.24
ARHGEF40-208ENST00000557498 STK38Q15208 465 aa16.58■□□□□ 0.24
ARHGEF40-208ENST00000557498 NOM1Q5C9Z4 860 aaKnown RBP16.58■□□□□ 0.24
ARHGEF40-208ENST00000557498 PIK3AP1Q6ZUJ8 805 aa16.58■□□□□ 0.24
ARHGEF40-208ENST00000557498 LINC00301Q8NCQ3 95 aa16.58■□□□□ 0.24
ARHGEF40-208ENST00000557498 CNKSR2Q8WXI2 1034 aa16.58■□□□□ 0.24
ARHGEF40-208ENST00000557498 GLT8D2Q9H1C3 349 aa16.58■□□□□ 0.24
ARHGEF40-208ENST00000557498 RIC8AQ9NPQ8 531 aa16.58■□□□□ 0.24
ARHGEF40-208ENST00000557498 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.58■□□□□ 0.24
ARHGEF40-208ENST00000557498 PPP1R9AQ9ULJ8 1098 aa16.58■□□□□ 0.24
ARHGEF40-208ENST00000557498 CCDC194A0A1B0GVG4 234 aa16.57■□□□□ 0.24
ARHGEF40-208ENST00000557498 FLOT1O75955 427 aa16.57■□□□□ 0.24
ARHGEF40-208ENST00000557498 TRAPPC10P48553 1259 aa16.57■□□□□ 0.24
ARHGEF40-208ENST00000557498 PPIL2Q13356 520 aa16.57■□□□□ 0.24
ARHGEF40-208ENST00000557498 SF3A1Q15459 793 aaKnown RBP16.57■□□□□ 0.24
ARHGEF40-208ENST00000557498 KLHL40Q2TBA0 621 aa16.57■□□□□ 0.24
ARHGEF40-208ENST00000557498 KRT25Q7Z3Z0 450 aa16.57■□□□□ 0.24
ARHGEF40-208ENST00000557498 REXO1Q8N1G1 1221 aaKnown RBP16.57■□□□□ 0.24
ARHGEF40-208ENST00000557498 PRPF38AQ8NAV1 312 aaKnown RBP16.57■□□□□ 0.24
ARHGEF40-208ENST00000557498 KCNG4Q8TDN1 519 aa16.57■□□□□ 0.24
ARHGEF40-208ENST00000557498 CUL5Q93034 780 aa16.57■□□□□ 0.24
ARHGEF40-208ENST00000557498 OTUD5Q96G74 571 aa16.57■□□□□ 0.24
ARHGEF40-208ENST00000557498 DDX49Q9Y6V7 483 aaKnown RBP16.57■□□□□ 0.24
ARHGEF40-208ENST00000557498 RLFQ13129 1914 aa16.57■□□□□ 0.24
ARHGEF40-208ENST00000557498 CXCL11O14625 94 aa16.56■□□□□ 0.24
ARHGEF40-208ENST00000557498 MRPL12P52815 198 aaKnown RBP16.56■□□□□ 0.24
ARHGEF40-208ENST00000557498 SLC39A14Q15043 492 aa16.56■□□□□ 0.24
ARHGEF40-208ENST00000557498 PTPAQ15257 358 aa16.56■□□□□ 0.24
ARHGEF40-208ENST00000557498 USH1GQ495M9 461 aa16.56■□□□□ 0.24
ARHGEF40-208ENST00000557498 TTC38Q5R3I4 469 aa16.56■□□□□ 0.24
ARHGEF40-208ENST00000557498 CHADLQ6NUI6 762 aa16.56■□□□□ 0.24
ARHGEF40-208ENST00000557498 CCDC174Q6PII3 467 aa16.56■□□□□ 0.24
ARHGEF40-208ENST00000557498 SAMD1Q6SPF0 538 aaPredicted RBP16.56■□□□□ 0.24
ARHGEF40-208ENST00000557498 GPT2Q8TD30 523 aa16.56■□□□□ 0.24
ARHGEF40-208ENST00000557498 OPTNQ96CV9 577 aa16.56■□□□□ 0.24
ARHGEF40-208ENST00000557498 GBA2Q9HCG7 927 aaPredicted RBP16.56■□□□□ 0.24
ARHGEF40-208ENST00000557498 KCNH4Q9UQ05 1017 aa16.56■□□□□ 0.24
ARHGEF40-208ENST00000557498 TRPM7Q96QT4 1865 aa16.55■□□□□ 0.24
ARHGEF40-208ENST00000557498 ABCB11O95342 1321 aa16.55■□□□□ 0.24
ARHGEF40-208ENST00000557498 A0A0G2JLL6 359 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF40-208ENST00000557498 SPTLC2O15270 562 aa16.55■□□□□ 0.24
ARHGEF40-208ENST00000557498 FDX1P10109 184 aa16.55■□□□□ 0.24
ARHGEF40-208ENST00000557498 TAL1P17542 331 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF40-208ENST00000557498 ATP2B1P20020 1258 aa16.55■□□□□ 0.24
ARHGEF40-208ENST00000557498 CLK2P49760 499 aaKnown RBP16.55■□□□□ 0.24
ARHGEF40-208ENST00000557498 NONOQ15233 471 aaKnown RBP eCLIP16.55■□□□□ 0.24
ARHGEF40-208ENST00000557498 PRRT2Q7Z6L0 340 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF40-208ENST00000557498 PGBD1Q96JS3 809 aa16.55■□□□□ 0.24
ARHGEF40-208ENST00000557498 PSTPIP2Q9H939 334 aa16.55■□□□□ 0.24
ARHGEF40-208ENST00000557498 SLC38A10Q9HBR0 1119 aa16.55■□□□□ 0.24
ARHGEF40-208ENST00000557498 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.55■□□□□ 0.24
ARHGEF40-208ENST00000557498 TMEM260Q9NX78 707 aa16.55■□□□□ 0.24
ARHGEF40-208ENST00000557498 BIN2Q9UBW5 565 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF40-208ENST00000557498 PCDHB6Q9Y5E3 794 aa16.55■□□□□ 0.24
ARHGEF40-208ENST00000557498 MYPNQ86TC9 1320 aa16.54■□□□□ 0.24
ARHGEF40-208ENST00000557498 USP17L15C9J2P7 530 aa16.54■□□□□ 0.24
ARHGEF40-208ENST00000557498 USP17L13C9JLJ4 530 aa16.54■□□□□ 0.24
ARHGEF40-208ENST00000557498 USP17L11C9JVI0 530 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms