RNA–Protein interactions for RNA: ENST00000557365.1

APEX1-219, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 831 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-219ENST00000557365 CDC37Q16543 378 aaPredicted RBP13.84□□□□□ -0.19
APEX1-219ENST00000557365 CCL15Q16663 113 aa13.84□□□□□ -0.19
APEX1-219ENST00000557365 QRICH1Q2TAL8 776 aa13.84□□□□□ -0.19
APEX1-219ENST00000557365 TREML2Q5T2D2 321 aa13.84□□□□□ -0.19
APEX1-219ENST00000557365 CCDC148Q8NFR7 591 aa13.84□□□□□ -0.19
APEX1-219ENST00000557365 BRI3BPQ8WY22 251 aa13.84□□□□□ -0.19
APEX1-219ENST00000557365 AMNQ9BXJ7 453 aa13.84□□□□□ -0.19
APEX1-219ENST00000557365 CPVLQ9H3G5 476 aa13.84□□□□□ -0.19
APEX1-219ENST00000557365 VAT1LQ9HCJ6 419 aa13.84□□□□□ -0.19
APEX1-219ENST00000557365 FBXO28Q9NVF7 368 aa13.84□□□□□ -0.19
APEX1-219ENST00000557365 ISY1Q9ULR0 285 aaKnown RBP13.84□□□□□ -0.19
APEX1-219ENST00000557365 ABT1Q9ULW3 272 aaKnown RBP13.84□□□□□ -0.19
APEX1-219ENST00000557365 WDR33Q9C0J8 1336 aaKnown RBP13.84□□□□□ -0.19
APEX1-219ENST00000557365 A0A0G2JMZ2 1700 aa13.84□□□□□ -0.19
APEX1-219ENST00000557365 VWA5AO00534 786 aa13.83□□□□□ -0.2
APEX1-219ENST00000557365 CALML3P27482 149 aa13.83□□□□□ -0.2
APEX1-219ENST00000557365 DGKZQ13574 1117 aa13.83□□□□□ -0.2
APEX1-219ENST00000557365 FBXO11Q86XK2 927 aa13.83□□□□□ -0.2
APEX1-219ENST00000557365 SAMD3Q8N6K7 520 aa13.83□□□□□ -0.2
APEX1-219ENST00000557365 REPS2Q8NFH8 660 aa13.83□□□□□ -0.2
APEX1-219ENST00000557365 KIFC2Q96AC6 838 aa13.83□□□□□ -0.2
APEX1-219ENST00000557365 COL11A1P12107 1806 aaPredicted RBP13.83□□□□□ -0.2
APEX1-219ENST00000557365 SPDYE16A6NNV3 312 aaPredicted RBP13.82□□□□□ -0.2
APEX1-219ENST00000557365 STXBP3O00186 592 aa13.82□□□□□ -0.2
APEX1-219ENST00000557365 BRD1O95696 1058 aa13.82□□□□□ -0.2
APEX1-219ENST00000557365 ICAM1P05362 532 aa13.82□□□□□ -0.2
APEX1-219ENST00000557365 TM4SF4P48230 202 aa13.82□□□□□ -0.2
APEX1-219ENST00000557365 IRX3P78415 501 aaPredicted RBP13.82□□□□□ -0.2
APEX1-219ENST00000557365 DEFB115Q30KQ5 88 aa13.82□□□□□ -0.2
APEX1-219ENST00000557365 KRT40Q6A162 431 aa13.82□□□□□ -0.2
APEX1-219ENST00000557365 WWC2Q6AWC2 1192 aa13.82□□□□□ -0.2
APEX1-219ENST00000557365 MCTP2Q6DN12 878 aa13.82□□□□□ -0.2
APEX1-219ENST00000557365 HOMER1Q86YM7 354 aa13.82□□□□□ -0.2
APEX1-219ENST00000557365 DAGLBQ8NCG7 672 aa13.82□□□□□ -0.2
APEX1-219ENST00000557365 PHF20Q9BVI0 1012 aa13.82□□□□□ -0.2
APEX1-219ENST00000557365 ZMYND12Q9H0C1 365 aa13.82□□□□□ -0.2
APEX1-219ENST00000557365 ASCC2Q9H1I8 757 aaPredicted RBP13.82□□□□□ -0.2
APEX1-219ENST00000557365 MTMR6Q9Y217 621 aa13.82□□□□□ -0.2
APEX1-219ENST00000557365 BTBD19C9JJ37 291 aa13.81□□□□□ -0.2
APEX1-219ENST00000557365 H3BQV1 296 aa13.81□□□□□ -0.2
APEX1-219ENST00000557365 PPP1R11O60927 126 aaPredicted RBP13.81□□□□□ -0.2
APEX1-219ENST00000557365 MMP1P03956 469 aa13.81□□□□□ -0.2
APEX1-219ENST00000557365 GNA11P29992 359 aa13.81□□□□□ -0.2
APEX1-219ENST00000557365 HERVK_113P62684 666 aa13.81□□□□□ -0.2
APEX1-219ENST00000557365 GHRHRQ02643 423 aa13.81□□□□□ -0.2
APEX1-219ENST00000557365 SREBF2Q12772 1141 aa13.81□□□□□ -0.2
APEX1-219ENST00000557365 NOGQ13253 232 aa13.81□□□□□ -0.2
APEX1-219ENST00000557365 SAFBQ15424 915 aaKnown RBP eCLIP13.81□□□□□ -0.2
APEX1-219ENST00000557365 TKFCQ3LXA3 575 aa13.81□□□□□ -0.2
APEX1-219ENST00000557365 IFFO2Q5TF58 517 aa13.81□□□□□ -0.2
APEX1-219ENST00000557365 OTUD7BQ6GQQ9 843 aa13.81□□□□□ -0.2
APEX1-219ENST00000557365 BICD2Q8TD16 824 aa13.81□□□□□ -0.2
APEX1-219ENST00000557365 ATG4CQ96DT6 458 aa13.81□□□□□ -0.2
APEX1-219ENST00000557365 AIFM3Q96NN9 605 aa13.81□□□□□ -0.2
APEX1-219ENST00000557365 P2RX7Q99572 595 aaKnown RBP13.81□□□□□ -0.2
APEX1-219ENST00000557365 FOXP1Q9H334 677 aaPredicted RBP13.81□□□□□ -0.2
APEX1-219ENST00000557365 ZSCAN16Q9H4T2 348 aaPredicted RBP13.81□□□□□ -0.2
APEX1-219ENST00000557365 MAP3K20Q9NYL2 800 aaKnown RBP13.81□□□□□ -0.2
APEX1-219ENST00000557365 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.81□□□□□ -0.2
APEX1-219ENST00000557365 PCDHA1Q9Y5I3 950 aa13.81□□□□□ -0.2
APEX1-219ENST00000557365 ZNF536O15090 1300 aa13.81□□□□□ -0.2
APEX1-219ENST00000557365 ABCB11O95342 1321 aa13.81□□□□□ -0.2
APEX1-219ENST00000557365 SMCHD1A6NHR9 2005 aa13.81□□□□□ -0.2
APEX1-219ENST00000557365 hCG_1642624A0A1W2PR95 340 aa13.8□□□□□ -0.2
APEX1-219ENST00000557365 PDHXO00330 501 aa13.8□□□□□ -0.2
APEX1-219ENST00000557365 PPFIA3O75145 1194 aa13.8□□□□□ -0.2
APEX1-219ENST00000557365 ZSCAN22P10073 491 aaPredicted RBP13.8□□□□□ -0.2
APEX1-219ENST00000557365 U2AF2P26368 475 aaKnown RBP eCLIP13.8□□□□□ -0.26e-9■□□□□ 10.7
APEX1-219ENST00000557365 COPB2P35606 906 aa13.8□□□□□ -0.2
APEX1-219ENST00000557365 GCLCP48506 637 aaPredicted RBP13.8□□□□□ -0.2
APEX1-219ENST00000557365 HEATR3Q7Z4Q2 680 aa13.8□□□□□ -0.2
APEX1-219ENST00000557365 PTPN18Q99952 460 aa13.8□□□□□ -0.2
APEX1-219ENST00000557365 BRMS1Q9HCU9 246 aa13.8□□□□□ -0.2
APEX1-219ENST00000557365 C6orf50Q9HD87 102 aa13.8□□□□□ -0.2
APEX1-219ENST00000557365 VPS54Q9P1Q0 977 aa13.8□□□□□ -0.2
APEX1-219ENST00000557365 ZNF214Q9UL59 606 aaPredicted RBP13.8□□□□□ -0.2
APEX1-219ENST00000557365 MRPL11Q9Y3B7 192 aaKnown RBP13.8□□□□□ -0.2
APEX1-219ENST00000557365 RABGAP1Q9Y3P9 1069 aa13.8□□□□□ -0.2
APEX1-219ENST00000557365 CTDP1Q9Y5B0 961 aaPredicted RBP13.8□□□□□ -0.2
APEX1-219ENST00000557365 PIK3CDO00329 1044 aa13.79□□□□□ -0.2
APEX1-219ENST00000557365 MRPL12P52815 198 aaKnown RBP13.79□□□□□ -0.2
APEX1-219ENST00000557365 NAPAP54920 295 aa13.79□□□□□ -0.2
APEX1-219ENST00000557365 NLRP5P59047 1200 aa13.79□□□□□ -0.2
APEX1-219ENST00000557365 NPY5RQ15761 445 aa13.79□□□□□ -0.2
APEX1-219ENST00000557365 TYW1BQ6NUM6 668 aa13.79□□□□□ -0.2
APEX1-219ENST00000557365 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.79□□□□□ -0.2
APEX1-219ENST00000557365 BRAPQ7Z569 592 aa13.79□□□□□ -0.2
APEX1-219ENST00000557365 PIBF1Q8WXW3 757 aa13.79□□□□□ -0.2
APEX1-219ENST00000557365 GPKOWQ92917 476 aaPredicted RBP eCLIP13.79□□□□□ -0.29e-8■■■□□ 15.2
APEX1-219ENST00000557365 SHISA4Q96DD7 197 aa13.79□□□□□ -0.2
APEX1-219ENST00000557365 PARK7Q99497 189 aaKnown RBP13.79□□□□□ -0.2
APEX1-219ENST00000557365 TEX13BQ9BXU2 312 aa13.79□□□□□ -0.2
APEX1-219ENST00000557365 RIC8AQ9NPQ8 531 aa13.79□□□□□ -0.2
APEX1-219ENST00000557365 PCDHA4Q9UN74 947 aa13.79□□□□□ -0.2
APEX1-219ENST00000557365 ZDHHC9Q9Y397 364 aa13.79□□□□□ -0.2
APEX1-219ENST00000557365 VPS37CA5D8V6 355 aaPredicted RBP13.78□□□□□ -0.2
APEX1-219ENST00000557365 SMCO2A6NFE2 343 aa13.78□□□□□ -0.2
APEX1-219ENST00000557365 M0R2N6 131 aa13.78□□□□□ -0.2
APEX1-219ENST00000557365 DTNBO60941 627 aa13.78□□□□□ -0.2
APEX1-219ENST00000557365 SLC25A27O95847 323 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms