RNA–Protein interactions for RNA: ENST00000557344.5

APEX1-218, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-218ENST00000557344 CRBNQ96SW2 442 aa12.13□□□□□ -0.47
APEX1-218ENST00000557344 ECHDC1Q9NTX5 307 aa12.13□□□□□ -0.47
APEX1-218ENST00000557344 ZHX1Q9UKY1 873 aaPredicted RBP12.13□□□□□ -0.47
APEX1-218ENST00000557344 COL11A1P12107 1806 aaPredicted RBP12.13□□□□□ -0.47
APEX1-218ENST00000557344 CHD7Q9P2D1 2997 aa12.12□□□□□ -0.47
APEX1-218ENST00000557344 POU3F3P20264 500 aaPredicted RBP12.12□□□□□ -0.47
APEX1-218ENST00000557344 RABGGTBP53611 331 aa12.12□□□□□ -0.47
APEX1-218ENST00000557344 ACVR2BQ13705 512 aa12.12□□□□□ -0.47
APEX1-218ENST00000557344 GNASQ5JWF2 1037 aa12.12□□□□□ -0.47
APEX1-218ENST00000557344 PPP2R2DQ66LE6 453 aa12.12□□□□□ -0.47
APEX1-218ENST00000557344 OTOP2Q7RTS6 562 aa12.12□□□□□ -0.47
APEX1-218ENST00000557344 ZNF467Q7Z7K2 595 aaPredicted RBP12.12□□□□□ -0.47
APEX1-218ENST00000557344 LCORLQ8N3X6 602 aa12.12□□□□□ -0.47
APEX1-218ENST00000557344 SLC43A3Q8NBI5 491 aa12.12□□□□□ -0.47
APEX1-218ENST00000557344 DDX11Q96FC9 970 aa12.12□□□□□ -0.47
APEX1-218ENST00000557344 CCDC17Q96LX7 622 aa12.12□□□□□ -0.47
APEX1-218ENST00000557344 SPC25Q9HBM1 224 aa12.12□□□□□ -0.47
APEX1-218ENST00000557344 CTAGE5O15320 804 aa12.11□□□□□ -0.47
APEX1-218ENST00000557344 EEF2P13639 858 aaKnown RBP12.11□□□□□ -0.47
APEX1-218ENST00000557344 MYOGP15173 224 aa12.11□□□□□ -0.47
APEX1-218ENST00000557344 NKX3-2P78367 333 aa12.11□□□□□ -0.47
APEX1-218ENST00000557344 SKIV2LQ15477 1246 aaKnown RBP12.11□□□□□ -0.47
APEX1-218ENST00000557344 CCDC144BQ3MJ40 725 aa12.11□□□□□ -0.47
APEX1-218ENST00000557344 TMEM31Q5JXX7 168 aa12.11□□□□□ -0.47
APEX1-218ENST00000557344 TEX13BQ9BXU2 312 aa12.11□□□□□ -0.47
APEX1-218ENST00000557344 ABHD16BQ9H3Z7 469 aa12.11□□□□□ -0.47
APEX1-218ENST00000557344 HIPK3Q9H422 1215 aa12.11□□□□□ -0.47
APEX1-218ENST00000557344 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.11□□□□□ -0.47
APEX1-218ENST00000557344 RIPK3Q9Y572 518 aa12.11□□□□□ -0.47
APEX1-218ENST00000557344 PCDHA11Q9Y5I1 949 aa12.11□□□□□ -0.47
APEX1-218ENST00000557344 UMODL1Q5DID0 1318 aa12.11□□□□□ -0.47
APEX1-218ENST00000557344 TLL1O43897 1013 aa12.1□□□□□ -0.47
APEX1-218ENST00000557344 UBE3CQ15386 1083 aa12.1□□□□□ -0.47
APEX1-218ENST00000557344 FAM83BQ5T0W9 1011 aa12.1□□□□□ -0.47
APEX1-218ENST00000557344 TSHZ3Q63HK5 1081 aa12.1□□□□□ -0.47
APEX1-218ENST00000557344 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.1□□□□□ -0.47
APEX1-218ENST00000557344 ARMT1Q9H993 441 aa12.1□□□□□ -0.47
APEX1-218ENST00000557344 KANSL2Q9H9L4 492 aa12.1□□□□□ -0.47
APEX1-218ENST00000557344 GOPCQ9HD26 462 aa12.1□□□□□ -0.47
APEX1-218ENST00000557344 MTCH2Q9Y6C9 303 aa12.1□□□□□ -0.47
APEX1-218ENST00000557344 SLC4A7Q9Y6M7 1214 aa12.1□□□□□ -0.47
APEX1-218ENST00000557344 GBF1Q92538 1859 aa12.1□□□□□ -0.47
APEX1-218ENST00000557344 XIRP2A4UGR9 3374 aa12.09□□□□□ -0.47
APEX1-218ENST00000557344 PRRC2BQ5JSZ5 2229 aaKnown RBP12.09□□□□□ -0.47
APEX1-218ENST00000557344 SMIM22K7EJ46 135 aa12.09□□□□□ -0.47
APEX1-218ENST00000557344 RFXAPO00287 272 aa12.09□□□□□ -0.47
APEX1-218ENST00000557344 PRKAB2O43741 272 aa12.09□□□□□ -0.47
APEX1-218ENST00000557344 GPR37L1O60883 481 aa12.09□□□□□ -0.47
APEX1-218ENST00000557344 MBD4O95243 580 aa12.09□□□□□ -0.47
APEX1-218ENST00000557344 CDK8P49336 464 aa12.09□□□□□ -0.47
APEX1-218ENST00000557344 CCL23P55773 120 aa12.09□□□□□ -0.47
APEX1-218ENST00000557344 C12orf60Q5U649 245 aa12.09□□□□□ -0.47
APEX1-218ENST00000557344 SNRNP48Q6IEG0 339 aaKnown RBP12.09□□□□□ -0.47
APEX1-218ENST00000557344 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.09□□□□□ -0.47
APEX1-218ENST00000557344 OTUD7AQ8TE49 926 aaPredicted RBP12.09□□□□□ -0.47
APEX1-218ENST00000557344 VWCEQ96DN2 955 aa12.09□□□□□ -0.47
APEX1-218ENST00000557344 FGD4Q96M96 766 aa12.09□□□□□ -0.47
APEX1-218ENST00000557344 NOC4LQ9BVI4 516 aaKnown RBP12.09□□□□□ -0.47
APEX1-218ENST00000557344 C11orf16Q9NQ32 467 aa12.09□□□□□ -0.47
APEX1-218ENST00000557344 COG5Q9UP83 839 aa12.09□□□□□ -0.47
APEX1-218ENST00000557344 REV3LO60673 3130 aa12.09□□□□□ -0.47
APEX1-218ENST00000557344 SALL3Q9BXA9 1300 aa12.09□□□□□ -0.47
APEX1-218ENST00000557344 PIEZO1Q92508 2521 aa12.08□□□□□ -0.48
APEX1-218ENST00000557344 ATP2A1O14983 1001 aa12.08□□□□□ -0.48
APEX1-218ENST00000557344 ATP2A2P16615 1042 aaKnown RBP12.08□□□□□ -0.48
APEX1-218ENST00000557344 BEX3Q00994 111 aa12.08□□□□□ -0.48
APEX1-218ENST00000557344 HDAC1Q13547 482 aaPredicted RBP12.08□□□□□ -0.48
APEX1-218ENST00000557344 ITGA7Q13683 1181 aa12.08□□□□□ -0.48
APEX1-218ENST00000557344 CXCL17Q6UXB2 119 aa12.08□□□□□ -0.48
APEX1-218ENST00000557344 C16orf86Q6ZW13 317 aa12.08□□□□□ -0.48
APEX1-218ENST00000557344 ARMCX2Q7L311 632 aa12.08□□□□□ -0.48
APEX1-218ENST00000557344 RPUSD2Q8IZ73 545 aaKnown RBP12.08□□□□□ -0.48
APEX1-218ENST00000557344 KBTBD3Q8NAB2 608 aa12.08□□□□□ -0.48
APEX1-218ENST00000557344 PI4K2BQ8TCG2 481 aa12.08□□□□□ -0.48
APEX1-218ENST00000557344 KHSRPQ92945 711 aaKnown RBP eCLIP12.08□□□□□ -0.48
APEX1-218ENST00000557344 SLF1Q9BQI6 1058 aa12.08□□□□□ -0.48
APEX1-218ENST00000557344 KATNBL1Q9H079 304 aa12.08□□□□□ -0.48
APEX1-218ENST00000557344 PUS7LQ9H0K6 701 aaKnown RBP12.08□□□□□ -0.48
APEX1-218ENST00000557344 WNT8AQ9H1J5 351 aa12.08□□□□□ -0.48
APEX1-218ENST00000557344 ATP8A2Q9NTI2 1148 aa12.08□□□□□ -0.48
APEX1-218ENST00000557344 GRIN2DO15399 1336 aa12.08□□□□□ -0.48
APEX1-218ENST00000557344 TTC41PQ6P2S7 1318 aa12.08□□□□□ -0.48
APEX1-218ENST00000557344 CYP2D7A0A087X1C5 515 aa12.07□□□□□ -0.48
APEX1-218ENST00000557344 USP17L12C9JPN9 530 aa12.07□□□□□ -0.48
APEX1-218ENST00000557344 USP17L21D6R901 530 aa12.07□□□□□ -0.48
APEX1-218ENST00000557344 GTPBP6O43824 516 aaPredicted RBP12.07□□□□□ -0.48
APEX1-218ENST00000557344 RAD21O60216 631 aa12.07□□□□□ -0.48
APEX1-218ENST00000557344 CABYRO75952 493 aa12.07□□□□□ -0.48
APEX1-218ENST00000557344 TMEM67Q5HYA8 995 aa12.07□□□□□ -0.48
APEX1-218ENST00000557344 CCDC144CPQ8IYA2 1237 aa12.07□□□□□ -0.48
APEX1-218ENST00000557344 PRPF38AQ8NAV1 312 aaKnown RBP12.07□□□□□ -0.48
APEX1-218ENST00000557344 GPATCH3Q96I76 525 aa12.07□□□□□ -0.48
APEX1-218ENST00000557344 NUP88Q99567 741 aaPredicted RBP12.07□□□□□ -0.48
APEX1-218ENST00000557344 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.07□□□□□ -0.48
APEX1-218ENST00000557344 SEZ6LQ9BYH1 1024 aa12.07□□□□□ -0.48
APEX1-218ENST00000557344 TRPV6Q9H1D0 765 aa12.07□□□□□ -0.48
APEX1-218ENST00000557344 ASTN1O14525 1302 aa12.07□□□□□ -0.48
APEX1-218ENST00000557344 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.06□□□□□ -0.48
APEX1-218ENST00000557344 EPOPA6NHQ4 379 aa12.06□□□□□ -0.48
APEX1-218ENST00000557344 ZBBXA8MT70 800 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms