RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 TRIM43BA6NCK2 446 aa18.81■□□□□ 0.6
TUBB3-213ENST00000557262 ORC4O43929 436 aa18.81■□□□□ 0.6
TUBB3-213ENST00000557262 NMT2O60551 498 aa18.81■□□□□ 0.6
TUBB3-213ENST00000557262 DUSP11O75319 330 aaKnown RBP18.81■□□□□ 0.6
TUBB3-213ENST00000557262 FGRP09769 529 aa18.81■□□□□ 0.6
TUBB3-213ENST00000557262 TKFCQ3LXA3 575 aa18.81■□□□□ 0.6
TUBB3-213ENST00000557262 MCMDC2Q4G0Z9 681 aa18.81■□□□□ 0.6
TUBB3-213ENST00000557262 SLC17A8Q8NDX2 589 aa18.81■□□□□ 0.6
TUBB3-213ENST00000557262 KLHDC9Q8NEP7 349 aa18.81■□□□□ 0.6
TUBB3-213ENST00000557262 NUP133Q8WUM0 1156 aa18.81■□□□□ 0.6
TUBB3-213ENST00000557262 TRIM43Q96BQ3 446 aaPredicted RBP18.81■□□□□ 0.6
TUBB3-213ENST00000557262 LENG1Q96BZ8 264 aaPredicted RBP18.81■□□□□ 0.6
TUBB3-213ENST00000557262 CHMP4CQ96CF2 233 aa18.81■□□□□ 0.6
TUBB3-213ENST00000557262 AGBL1Q96MI9 1066 aa18.81■□□□□ 0.6
TUBB3-213ENST00000557262 ACAD9Q9H845 621 aa18.81■□□□□ 0.6
TUBB3-213ENST00000557262 HOMER2Q9NSB8 354 aa18.81■□□□□ 0.6
TUBB3-213ENST00000557262 ZNF536O15090 1300 aa18.8■□□□□ 0.6
TUBB3-213ENST00000557262 SYNRGQ9UMZ2 1314 aa18.8■□□□□ 0.6
TUBB3-213ENST00000557262 POTEB2H3BUK9 544 aa18.8■□□□□ 0.6
TUBB3-213ENST00000557262 FGAP02671 866 aa18.8■□□□□ 0.6
TUBB3-213ENST00000557262 NOVP48745 357 aa18.8■□□□□ 0.6
TUBB3-213ENST00000557262 ACLYP53396 1101 aa18.8■□□□□ 0.6
TUBB3-213ENST00000557262 SHHQ15465 462 aa18.8■□□□□ 0.6
TUBB3-213ENST00000557262 FAM109BQ6ICB4 259 aaPredicted RBP18.8■□□□□ 0.6
TUBB3-213ENST00000557262 KCTD1Q719H9 257 aa18.8■□□□□ 0.6
TUBB3-213ENST00000557262 FGD4Q96M96 766 aa18.8■□□□□ 0.6
TUBB3-213ENST00000557262 MOXD2PA6NHM9 499 aa18.79■□□□□ 0.6
TUBB3-213ENST00000557262 CLTBP09497 229 aa18.79■□□□□ 0.6
TUBB3-213ENST00000557262 CNTN2Q02246 1040 aa18.79■□□□□ 0.6
TUBB3-213ENST00000557262 KCNA10Q16322 511 aa18.79■□□□□ 0.6
TUBB3-213ENST00000557262 CCDC144BQ3MJ40 725 aa18.79■□□□□ 0.6
TUBB3-213ENST00000557262 CCSAPQ6IQ19 270 aaPredicted RBP18.79■□□□□ 0.6
TUBB3-213ENST00000557262 ARMCX2Q7L311 632 aa18.79■□□□□ 0.6
TUBB3-213ENST00000557262 FAM133AQ8N9E0 248 aa18.79■□□□□ 0.6
TUBB3-213ENST00000557262 FAM227BQ96M60 508 aa18.79■□□□□ 0.6
TUBB3-213ENST00000557262 TRERF1Q96PN7 1200 aa18.79■□□□□ 0.6
TUBB3-213ENST00000557262 STARD7Q9NQZ5 370 aa18.79■□□□□ 0.6
TUBB3-213ENST00000557262 RNF146Q9NTX7 359 aa18.79■□□□□ 0.6
TUBB3-213ENST00000557262 STXBP5LQ9Y2K9 1186 aa18.79■□□□□ 0.6
TUBB3-213ENST00000557262 A0A0D9SFI3 127 aa18.78■□□□□ 0.6
TUBB3-213ENST00000557262 ALAS1P13196 640 aa18.78■□□□□ 0.6
TUBB3-213ENST00000557262 CCDC144CPQ8IYA2 1237 aa18.78■□□□□ 0.6
TUBB3-213ENST00000557262 PCSK9Q8NBP7 692 aaKnown RBP18.78■□□□□ 0.6
TUBB3-213ENST00000557262 TOX2Q96NM4 488 aa18.78■□□□□ 0.6
TUBB3-213ENST00000557262 LNPKQ9C0E8 428 aa18.78■□□□□ 0.6
TUBB3-213ENST00000557262 RWDD1Q9H446 243 aaPredicted RBP18.78■□□□□ 0.6
TUBB3-213ENST00000557262 SPC25Q9HBM1 224 aa18.78■□□□□ 0.6
TUBB3-213ENST00000557262 A1CFQ9NQ94 594 aaKnown RBP18.78■□□□□ 0.6
TUBB3-213ENST00000557262 TOMM22Q9NS69 142 aa18.78■□□□□ 0.6
TUBB3-213ENST00000557262 PRR12Q9ULL5 1215 aa18.78■□□□□ 0.6
TUBB3-213ENST00000557262 LTBP2Q14767 1821 aa18.77■□□□□ 0.6
TUBB3-213ENST00000557262 DCDC2CA8MYV0 355 aa18.77■□□□□ 0.6
TUBB3-213ENST00000557262 TRIM6-TRIM34B2RNG4 842 aa18.77■□□□□ 0.6
TUBB3-213ENST00000557262 KIAA0355O15063 1070 aa18.77■□□□□ 0.6
TUBB3-213ENST00000557262 PQBP1O60828 265 aaKnown RBP18.77■□□□□ 0.6
TUBB3-213ENST00000557262 C6orf222P0C671 652 aaPredicted RBP18.77■□□□□ 0.6
TUBB3-213ENST00000557262 HSPD1P10809 573 aaKnown RBP18.77■□□□□ 0.6
TUBB3-213ENST00000557262 ITGB8P26012 769 aa18.77■□□□□ 0.6
TUBB3-213ENST00000557262 CST5P28325 142 aaPredicted RBP18.77■□□□□ 0.6
TUBB3-213ENST00000557262 GJA9P57773 515 aa18.77■□□□□ 0.6
TUBB3-213ENST00000557262 C9orf50Q5SZB4 431 aa18.77■□□□□ 0.6
TUBB3-213ENST00000557262 CCDC174Q6PII3 467 aa18.77■□□□□ 0.6
TUBB3-213ENST00000557262 ANKRD33Q7Z3H0 272 aa18.77■□□□□ 0.6
TUBB3-213ENST00000557262 DCAF4Q8WV16 495 aa18.77■□□□□ 0.6
TUBB3-213ENST00000557262 UPF3AQ9H1J1 476 aaKnown RBP18.77■□□□□ 0.6
TUBB3-213ENST00000557262 TCP11L1Q9NUJ3 509 aa18.77■□□□□ 0.6
TUBB3-213ENST00000557262 TMEM39AQ9NV64 488 aa18.77■□□□□ 0.6
TUBB3-213ENST00000557262 MTMR7Q9Y216 660 aa18.77■□□□□ 0.6
TUBB3-213ENST00000557262 ELP1O95163 1332 aa18.76■□□□□ 0.59
TUBB3-213ENST00000557262 MYADML2A6NDP7 307 aa18.76■□□□□ 0.59
TUBB3-213ENST00000557262 SOWAHBA6NEL2 793 aa18.76■□□□□ 0.59
TUBB3-213ENST00000557262 ASB14A6NK59 587 aa18.76■□□□□ 0.59
TUBB3-213ENST00000557262 ADCY6O43306 1168 aa18.76■□□□□ 0.59
TUBB3-213ENST00000557262 TOP1P11387 765 aaKnown RBP18.76■□□□□ 0.59
TUBB3-213ENST00000557262 RAG1P15918 1043 aa18.76■□□□□ 0.59
TUBB3-213ENST00000557262 SNAP25P60880 206 aa18.76■□□□□ 0.59
TUBB3-213ENST00000557262 NMIQ13287 307 aaPredicted RBP18.76■□□□□ 0.59
TUBB3-213ENST00000557262 RRP12Q5JTH9 1297 aaKnown RBP18.76■□□□□ 0.59
TUBB3-213ENST00000557262 SMC5Q8IY18 1101 aa18.76■□□□□ 0.59
TUBB3-213ENST00000557262 RILPL2Q969X0 211 aa18.76■□□□□ 0.59
TUBB3-213ENST00000557262 GLT1D1Q96MS3 346 aa18.76■□□□□ 0.59
TUBB3-213ENST00000557262 KATNBL1Q9H079 304 aa18.76■□□□□ 0.59
TUBB3-213ENST00000557262 A0A0C4DFX4 3053 aa18.75■□□□□ 0.59
TUBB3-213ENST00000557262 ASGR1P07306 291 aa18.75■□□□□ 0.59
TUBB3-213ENST00000557262 IRX5P78411 483 aaPredicted RBP18.75■□□□□ 0.59
TUBB3-213ENST00000557262 FAAP100Q0VG06 881 aa18.75■□□□□ 0.59
TUBB3-213ENST00000557262 CCDC96Q2M329 555 aa18.75■□□□□ 0.59
TUBB3-213ENST00000557262 GNASQ5JWF2 1037 aa18.75■□□□□ 0.59
TUBB3-213ENST00000557262 B4GALNT3Q6L9W6 998 aa18.75■□□□□ 0.59
TUBB3-213ENST00000557262 BTNL9Q6UXG8 535 aa18.75■□□□□ 0.59
TUBB3-213ENST00000557262 ZNF589Q86UQ0 364 aaPredicted RBP18.75■□□□□ 0.59
TUBB3-213ENST00000557262 VTI1AQ96AJ9 217 aa18.75■□□□□ 0.59
TUBB3-213ENST00000557262 TMEM47Q9BQJ4 181 aa18.75■□□□□ 0.59
TUBB3-213ENST00000557262 ZMYM6O95789 1325 aa18.74■□□□□ 0.59
TUBB3-213ENST00000557262 ICAM1P05362 532 aa18.74■□□□□ 0.59
TUBB3-213ENST00000557262 CDK7P50613 346 aa18.74■□□□□ 0.59
TUBB3-213ENST00000557262 NKX3-2P78367 333 aa18.74■□□□□ 0.59
TUBB3-213ENST00000557262 TNFAIP2Q03169 654 aa18.74■□□□□ 0.59
TUBB3-213ENST00000557262 MUM1L1Q5H9M0 696 aa18.74■□□□□ 0.59
TUBB3-213ENST00000557262 TTBK2Q6IQ55 1244 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms