RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 USP17L2Q6R6M4 530 aa6.36□□□□□ -1.39
ATXN3-244ENST00000556898 USP17L1Q7RTZ2 530 aa6.36□□□□□ -1.39
ATXN3-244ENST00000556898 KIAA0825Q8IV33 1275 aa6.36□□□□□ -1.39
ATXN3-244ENST00000556898 LCORLQ8N3X6 602 aa6.36□□□□□ -1.39
ATXN3-244ENST00000556898 WDR66Q8TBY9 1149 aa6.36□□□□□ -1.39
ATXN3-244ENST00000556898 ZNF296Q8WUU4 475 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-244ENST00000556898 LSG1Q9H089 658 aaKnown RBP6.36□□□□□ -1.39
ATXN3-244ENST00000556898 ETNK1Q9HBU6 452 aa6.36□□□□□ -1.39
ATXN3-244ENST00000556898 ANO2Q9NQ90 1003 aa6.36□□□□□ -1.39
ATXN3-244ENST00000556898 PHF24Q9UPV7 400 aa6.36□□□□□ -1.39
ATXN3-244ENST00000556898 SCN9AQ15858 1988 aa6.36□□□□□ -1.39
ATXN3-244ENST00000556898 ZNF646O15015 1829 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-244ENST00000556898 RFX7Q2KHR2 1363 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 DOCK2Q92608 1830 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 SMIM22K7EJ46 135 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 FOXP2O15409 715 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 GPAA1O43292 621 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 MBD4O95243 580 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 TBC1D8O95759 1140 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 EGFRP00533 1210 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 MYCP01106 439 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-244ENST00000556898 LDHBP07195 334 aaKnown RBP6.35□□□□□ -1.39
ATXN3-244ENST00000556898 BMP4P12644 408 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 FGFR3P22607 806 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 TM4SF4P48230 202 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 MAP3K12Q12852 859 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 NCOA4Q13772 614 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 LBRQ14739 615 aaKnown RBP6.35□□□□□ -1.39
ATXN3-244ENST00000556898 GRIN2CQ14957 1233 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 UBE3CQ15386 1083 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 MCMDC2Q4G0Z9 681 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 GNASQ5JWF2 1037 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 STRIP1Q5VSL9 837 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 NAA16Q6N069 864 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-244ENST00000556898 DZIP1Q86YF9 867 aaKnown RBP6.35□□□□□ -1.39
ATXN3-244ENST00000556898 RASAL3Q86YV0 1011 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 GOLGA6L1Q8N7Z2 621 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 APPBP2Q92624 585 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 CDCA5Q96FF9 252 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 BTBD6Q96KE9 485 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 RIOK1Q9BRS2 568 aaKnown RBP6.35□□□□□ -1.39
ATXN3-244ENST00000556898 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.35□□□□□ -1.39
ATXN3-244ENST00000556898 HELLSQ9NRZ9 838 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 DNAAF2Q9NVR5 837 aaKnown RBP6.35□□□□□ -1.39
ATXN3-244ENST00000556898 AATFQ9NY61 560 aaKnown RBP eCLIP6.35□□□□□ -1.39
ATXN3-244ENST00000556898 TFIP11Q9UBB9 837 aaKnown RBP6.35□□□□□ -1.39
ATXN3-244ENST00000556898 SERPINA10Q9UK55 444 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 PALD1Q9ULE6 856 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 ATXN7L1Q9ULK2 861 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-244ENST00000556898 TTF2Q9UNY4 1162 aaKnown RBP6.35□□□□□ -1.39
ATXN3-244ENST00000556898 TAF6LQ9Y6J9 622 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 CASP8AP2Q9UKL3 1982 aa6.35□□□□□ -1.39
ATXN3-244ENST00000556898 PDE4DIPQ5VU43 2346 aa6.34□□□□□ -1.39
ATXN3-244ENST00000556898 CCDC171Q6TFL3 1326 aa6.34□□□□□ -1.39
ATXN3-244ENST00000556898 C1QTNF9BB2RNN3 333 aa6.34□□□□□ -1.39
ATXN3-244ENST00000556898 HIP1O00291 1037 aa6.34□□□□□ -1.39
ATXN3-244ENST00000556898 FKTNO75072 461 aa6.34□□□□□ -1.39
ATXN3-244ENST00000556898 ZFYP08048 801 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-244ENST00000556898 VIL1P09327 827 aaKnown RBP6.34□□□□□ -1.39
ATXN3-244ENST00000556898 BTDP43251 543 aa6.34□□□□□ -1.39
ATXN3-244ENST00000556898 USP4Q13107 963 aa6.34□□□□□ -1.39
ATXN3-244ENST00000556898 COL9A3Q14050 684 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-244ENST00000556898 KIF4BQ2VIQ3 1234 aa6.34□□□□□ -1.39
ATXN3-244ENST00000556898 EML3Q32P44 896 aa6.34□□□□□ -1.39
ATXN3-244ENST00000556898 SPTY2D1Q68D10 685 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-244ENST00000556898 ZSCAN25Q6NSZ9 544 aa6.34□□□□□ -1.39
ATXN3-244ENST00000556898 CASC1Q6TDU7 716 aa6.34□□□□□ -1.39
ATXN3-244ENST00000556898 PGBD3Q8N328 593 aa6.34□□□□□ -1.39
ATXN3-244ENST00000556898 CCDC82Q8N4S0 544 aa6.34□□□□□ -1.39
ATXN3-244ENST00000556898 SH3RF3Q8TEJ3 882 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-244ENST00000556898 SDR42E1Q8WUS8 393 aa6.34□□□□□ -1.39
ATXN3-244ENST00000556898 STRBPQ96SI9 672 aaKnown RBP6.34□□□□□ -1.39
ATXN3-244ENST00000556898 GMLQ99445 158 aa6.34□□□□□ -1.39
ATXN3-244ENST00000556898 USP26Q9BXU7 913 aa6.34□□□□□ -1.39
ATXN3-244ENST00000556898 EPB41L4AQ9HCS5 686 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-244ENST00000556898 KLF15Q9UIH9 416 aa6.34□□□□□ -1.39
ATXN3-244ENST00000556898 SCAF8Q9UPN6 1271 aaKnown RBP6.34□□□□□ -1.39
ATXN3-244ENST00000556898 DAGLAQ9Y4D2 1042 aa6.34□□□□□ -1.39
ATXN3-244ENST00000556898 AK9Q5TCS8 1911 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 MYH13Q9UKX3 1938 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 MROH7-TTC4A0A0A0MT08 1334 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 CYP2D7A0A087X1C5 515 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 UBE2Q2LH0YL09 131 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 CYP2D6P10635 497 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 HSPD1P10809 573 aaKnown RBP6.33□□□□□ -1.4
ATXN3-244ENST00000556898 EPXP11678 715 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 ITGB7P26010 798 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 CRKP46108 304 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 CACNB3P54284 484 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 ZNF280AP59817 542 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-244ENST00000556898 SLC4A8Q2Y0W8 1093 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 CFAP100Q494V2 611 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 OXLD1Q5BKU9 147 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 EFHC2Q5JST6 749 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 ANGEL2Q5VTE6 544 aaKnown RBP6.33□□□□□ -1.4
ATXN3-244ENST00000556898 SLCO4C1Q6ZQN7 724 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 CD163Q86VB7 1156 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 STK11IPQ8N1F8 1099 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 Q8N3U1 123 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 ZGPATQ8N5A5 531 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms