RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 STAT6P42226 847 aa11.47□□□□□ -0.57
TMEM260-211ENST00000556648 NONOQ15233 471 aaKnown RBP eCLIP11.47□□□□□ -0.57
TMEM260-211ENST00000556648 LETM2Q2VYF4 491 aa11.47□□□□□ -0.57
TMEM260-211ENST00000556648 E4F1Q66K89 784 aaPredicted RBP11.47□□□□□ -0.57
TMEM260-211ENST00000556648 DTHD1Q6ZMT9 781 aa11.47□□□□□ -0.57
TMEM260-211ENST00000556648 KRT25Q7Z3Z0 450 aa11.47□□□□□ -0.57
TMEM260-211ENST00000556648 PDGFDQ9GZP0 370 aaPredicted RBP11.47□□□□□ -0.57
TMEM260-211ENST00000556648 DISC1Q9NRI5 854 aa11.47□□□□□ -0.57
TMEM260-211ENST00000556648 FAM198AQ9UFP1 575 aa11.47□□□□□ -0.57
TMEM260-211ENST00000556648 SWAP70Q9UH65 585 aa11.47□□□□□ -0.57
TMEM260-211ENST00000556648 EDIL3O43854 480 aa11.47□□□□□ -0.57
TMEM260-211ENST00000556648 CCNT1O60563 726 aaKnown RBP11.47□□□□□ -0.57
TMEM260-211ENST00000556648 HLA-DOAP06340 250 aa11.47□□□□□ -0.57
TMEM260-211ENST00000556648 ERCC5P28715 1186 aaPredicted RBP11.47□□□□□ -0.57
TMEM260-211ENST00000556648 RBM5P52756 815 aaKnown RBP eCLIP11.47□□□□□ -0.57
TMEM260-211ENST00000556648 ZNF543Q08ER8 600 aa11.47□□□□□ -0.57
TMEM260-211ENST00000556648 ASPRV1Q53RT3 343 aa11.47□□□□□ -0.57
TMEM260-211ENST00000556648 SOGA3Q5TF21 947 aa11.47□□□□□ -0.57
TMEM260-211ENST00000556648 PODNQ7Z5L7 613 aa11.47□□□□□ -0.57
TMEM260-211ENST00000556648 GSDMAQ96QA5 445 aa11.47□□□□□ -0.57
TMEM260-211ENST00000556648 C6orf50Q9HD87 102 aa11.47□□□□□ -0.57
TMEM260-211ENST00000556648 GDAQ9Y2T3 454 aa11.47□□□□□ -0.57
TMEM260-211ENST00000556648 MYO1BO43795 1136 aa11.46□□□□□ -0.57
TMEM260-211ENST00000556648 OR52Z1P0C646 297 aa11.46□□□□□ -0.57
TMEM260-211ENST00000556648 CDK11BP21127 795 aaKnown RBP11.46□□□□□ -0.57
TMEM260-211ENST00000556648 HMGB2P26583 209 aaKnown RBP11.46□□□□□ -0.57
TMEM260-211ENST00000556648 SMARCA1P28370 1054 aa11.46□□□□□ -0.57
TMEM260-211ENST00000556648 EN1Q05925 392 aaPredicted RBP11.46□□□□□ -0.57
TMEM260-211ENST00000556648 UBE2SQ16763 222 aa11.46□□□□□ -0.57
TMEM260-211ENST00000556648 CCDC96Q2M329 555 aa11.46□□□□□ -0.57
TMEM260-211ENST00000556648 NYAP1Q6ZVC0 841 aa11.46□□□□□ -0.57
TMEM260-211ENST00000556648 KCTD1Q719H9 257 aa11.46□□□□□ -0.57
TMEM260-211ENST00000556648 APTXQ7Z2E3 356 aaKnown RBP11.46□□□□□ -0.57
TMEM260-211ENST00000556648 ADGRF4Q8IZF3 695 aa11.46□□□□□ -0.57
TMEM260-211ENST00000556648 TBCKQ8TEA7 893 aa11.46□□□□□ -0.57
TMEM260-211ENST00000556648 C7orf43Q8WVR3 580 aa11.46□□□□□ -0.57
TMEM260-211ENST00000556648 JMJD4Q9H9V9 463 aa11.46□□□□□ -0.57
TMEM260-211ENST00000556648 C10orf71Q711Q0 1435 aa11.46□□□□□ -0.58
TMEM260-211ENST00000556648 YDJCA8MPS7 323 aa11.45□□□□□ -0.58
TMEM260-211ENST00000556648 USP17L10C9JJH3 530 aa11.45□□□□□ -0.58
TMEM260-211ENST00000556648 DYNC1I1O14576 645 aa11.45□□□□□ -0.58
TMEM260-211ENST00000556648 RPN1P04843 607 aaKnown RBP11.45□□□□□ -0.58
TMEM260-211ENST00000556648 TBX2Q13207 712 aaPredicted RBP11.45□□□□□ -0.58
TMEM260-211ENST00000556648 SLC15A2Q16348 729 aa11.45□□□□□ -0.58
TMEM260-211ENST00000556648 STRIP1Q5VSL9 837 aa11.45□□□□□ -0.58
TMEM260-211ENST00000556648 SPATA1Q5VX52 437 aa11.45□□□□□ -0.58
TMEM260-211ENST00000556648 RRAGBQ5VZM2 374 aa11.45□□□□□ -0.58
TMEM260-211ENST00000556648 NEK8Q86SG6 692 aa11.45□□□□□ -0.58
TMEM260-211ENST00000556648 REXO1Q8N1G1 1221 aaKnown RBP11.45□□□□□ -0.58
TMEM260-211ENST00000556648 CCDC12Q8WUD4 166 aaPredicted RBP11.45□□□□□ -0.58
TMEM260-211ENST00000556648 CCDC34Q96HJ3 373 aa11.45□□□□□ -0.58
TMEM260-211ENST00000556648 MYO3BQ8WXR4 1341 aa11.45□□□□□ -0.58
TMEM260-211ENST00000556648 TEX33O43247 280 aa11.45□□□□□ -0.58
TMEM260-211ENST00000556648 PLCG1P19174 1290 aa11.45□□□□□ -0.58
TMEM260-211ENST00000556648 GNA11P29992 359 aa11.45□□□□□ -0.58
TMEM260-211ENST00000556648 TXLNAP40222 546 aa11.45□□□□□ -0.58
TMEM260-211ENST00000556648 ADCY7P51828 1080 aa11.45□□□□□ -0.58
TMEM260-211ENST00000556648 CDKAL1Q5VV42 579 aa11.45□□□□□ -0.58
TMEM260-211ENST00000556648 CEP135Q66GS9 1140 aa11.45□□□□□ -0.58
TMEM260-211ENST00000556648 TMEM139Q8IV31 216 aa11.45□□□□□ -0.58
TMEM260-211ENST00000556648 ZNF592Q92610 1267 aa11.45□□□□□ -0.58
TMEM260-211ENST00000556648 PPP1R13BQ96KQ4 1090 aa11.45□□□□□ -0.58
TMEM260-211ENST00000556648 EHD4Q9H223 541 aa11.45□□□□□ -0.58
TMEM260-211ENST00000556648 RGS17Q9UGC6 210 aaPredicted RBP11.45□□□□□ -0.58
TMEM260-211ENST00000556648 MAPK8IP1Q9UQF2 711 aa11.45□□□□□ -0.58
TMEM260-211ENST00000556648 ESYT2A0FGR8 921 aa11.44□□□□□ -0.58
TMEM260-211ENST00000556648 SLC37A4O43826 429 aa11.44□□□□□ -0.58
TMEM260-211ENST00000556648 RAD21O60216 631 aa11.44□□□□□ -0.58
TMEM260-211ENST00000556648 TDP2O95551 362 aa11.44□□□□□ -0.58
TMEM260-211ENST00000556648 GTF2F1P35269 517 aaKnown RBP eCLIP11.44□□□□□ -0.58
TMEM260-211ENST00000556648 PRPHP41219 470 aa11.44□□□□□ -0.58
TMEM260-211ENST00000556648 FAM177A1Q8N128 213 aaPredicted RBP11.44□□□□□ -0.58
TMEM260-211ENST00000556648 RASSF8Q8NHQ8 419 aa11.44□□□□□ -0.58
TMEM260-211ENST00000556648 CAMKK2Q96RR4 588 aa11.44□□□□□ -0.58
TMEM260-211ENST00000556648 CCSER1Q9C0I3 900 aa11.44□□□□□ -0.58
TMEM260-211ENST00000556648 TDRD3Q9H7E2 651 aaKnown RBP11.44□□□□□ -0.58
TMEM260-211ENST00000556648 ARFGEF1Q9Y6D6 1849 aa11.44□□□□□ -0.58
TMEM260-211ENST00000556648 COL4A5P29400 1685 aa11.44□□□□□ -0.58
TMEM260-211ENST00000556648 A0A1B0GTH6 734 aa11.43□□□□□ -0.58
TMEM260-211ENST00000556648 C21orf2O43822 256 aa11.43□□□□□ -0.58
TMEM260-211ENST00000556648 KLRC4O43908 158 aa11.43□□□□□ -0.58
TMEM260-211ENST00000556648 GDF11O95390 407 aa11.43□□□□□ -0.58
TMEM260-211ENST00000556648 TECP42680 631 aa11.43□□□□□ -0.58
TMEM260-211ENST00000556648 ADKP55263 362 aaKnown RBP11.43□□□□□ -0.58
TMEM260-211ENST00000556648 JAG1P78504 1218 aa11.43□□□□□ -0.58
TMEM260-211ENST00000556648 NR1I3Q14994 352 aa11.43□□□□□ -0.58
TMEM260-211ENST00000556648 POTEAQ6S8J7 498 aa11.43□□□□□ -0.58
TMEM260-211ENST00000556648 CABP7Q86V35 215 aa11.43□□□□□ -0.58
TMEM260-211ENST00000556648 ZSCAN29Q8IWY8 852 aaPredicted RBP11.43□□□□□ -0.58
TMEM260-211ENST00000556648 ZNF710Q8N1W2 664 aa11.43□□□□□ -0.58
TMEM260-211ENST00000556648 NELFBQ8WX92 580 aa11.43□□□□□ -0.58
TMEM260-211ENST00000556648 CNKSR1Q969H4 720 aa11.43□□□□□ -0.58
TMEM260-211ENST00000556648 PYM1Q9BRP8 204 aaKnown RBP11.43□□□□□ -0.58
TMEM260-211ENST00000556648 MMTAG2Q9BU76 263 aaKnown RBP11.43□□□□□ -0.58
TMEM260-211ENST00000556648 TMX1Q9H3N1 280 aa11.43□□□□□ -0.58
TMEM260-211ENST00000556648 KCND1Q9NSA2 647 aa11.43□□□□□ -0.58
TMEM260-211ENST00000556648 TRIM49BA6NDI0 452 aa11.43□□□□□ -0.58
TMEM260-211ENST00000556648 EEF2P13639 858 aaKnown RBP11.43□□□□□ -0.58
TMEM260-211ENST00000556648 TAL1P17542 331 aaPredicted RBP11.43□□□□□ -0.58
TMEM260-211ENST00000556648 UBA7P41226 1012 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms