RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 KIF2CQ99661 725 aa7.28□□□□□ -1.24
CPSF2-205ENST00000556622 GZF1Q9H116 711 aaPredicted RBP7.28□□□□□ -1.24
CPSF2-205ENST00000556622 DBF4Q9UBU7 674 aaPredicted RBP7.28□□□□□ -1.24
CPSF2-205ENST00000556622 RAXQ9Y2V3 346 aa7.28□□□□□ -1.24
CPSF2-205ENST00000556622 PPME1Q9Y570 386 aa7.28□□□□□ -1.24
CPSF2-205ENST00000556622 ATP10DQ9P241 1426 aa7.27□□□□□ -1.24
CPSF2-205ENST00000556622 LY75O60449 1722 aa7.27□□□□□ -1.25
CPSF2-205ENST00000556622 TOGARAM1Q9Y4F4 1720 aa7.27□□□□□ -1.25
CPSF2-205ENST00000556622 GPR182O15218 404 aa7.27□□□□□ -1.25
CPSF2-205ENST00000556622 ALDH1L1O75891 902 aa7.27□□□□□ -1.25
CPSF2-205ENST00000556622 GLRX3O76003 335 aaKnown RBP7.27□□□□□ -1.25
CPSF2-205ENST00000556622 STARD3NLO95772 234 aa7.27□□□□□ -1.25
CPSF2-205ENST00000556622 TPM3P06753 285 aa7.27□□□□□ -1.25
CPSF2-205ENST00000556622 TPM2P07951 284 aa7.27□□□□□ -1.25
CPSF2-205ENST00000556622 GSPT1P15170 499 aaKnown RBP7.27□□□□□ -1.25
CPSF2-205ENST00000556622 ZKSCAN1P17029 563 aaPredicted RBP7.27□□□□□ -1.25
CPSF2-205ENST00000556622 PDCP20941 246 aa7.27□□□□□ -1.25
CPSF2-205ENST00000556622 CRKLP46109 303 aaKnown RBP7.27□□□□□ -1.25
CPSF2-205ENST00000556622 NEK4P51957 841 aa7.27□□□□□ -1.25
CPSF2-205ENST00000556622 DSC3Q14574 896 aa7.27□□□□□ -1.25
CPSF2-205ENST00000556622 SETDB1Q15047 1291 aa7.27□□□□□ -1.25
CPSF2-205ENST00000556622 ANKRD1Q15327 319 aa7.27□□□□□ -1.25
CPSF2-205ENST00000556622 UVSSAQ2YD98 709 aa7.27□□□□□ -1.25
CPSF2-205ENST00000556622 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.27□□□□□ -1.25
CPSF2-205ENST00000556622 CLASRPQ8N2M8 674 aaKnown RBP7.27□□□□□ -1.25
CPSF2-205ENST00000556622 TEX13AQ9BXU3 409 aaPredicted RBP7.27□□□□□ -1.25
CPSF2-205ENST00000556622 BHLHE41Q9C0J9 482 aaPredicted RBP7.27□□□□□ -1.25
CPSF2-205ENST00000556622 MIS18AQ9NYP9 233 aa7.27□□□□□ -1.25
CPSF2-205ENST00000556622 SCN11AQ9UI33 1791 aa7.26□□□□□ -1.25
CPSF2-205ENST00000556622 PDE2AO00408 941 aaPredicted RBP7.26□□□□□ -1.25
CPSF2-205ENST00000556622 KCNQ3O43525 872 aa7.26□□□□□ -1.25
CPSF2-205ENST00000556622 PSMA5P28066 241 aa7.26□□□□□ -1.25
CPSF2-205ENST00000556622 CDC27P30260 824 aa7.26□□□□□ -1.25
CPSF2-205ENST00000556622 CUL4AQ13619 759 aa7.26□□□□□ -1.25
CPSF2-205ENST00000556622 KIAA0319Q5VV43 1072 aa7.26□□□□□ -1.25
CPSF2-205ENST00000556622 GDF6Q6KF10 455 aaPredicted RBP7.26□□□□□ -1.25
CPSF2-205ENST00000556622 Q6ZS46 218 aa7.26□□□□□ -1.25
CPSF2-205ENST00000556622 TMC7Q7Z402 723 aa7.26□□□□□ -1.25
CPSF2-205ENST00000556622 ZSCAN30Q86W11 494 aa7.26□□□□□ -1.25
CPSF2-205ENST00000556622 AMIGO3Q86WK7 504 aa7.26□□□□□ -1.25
CPSF2-205ENST00000556622 SSH3Q8TE77 659 aa7.26□□□□□ -1.25
CPSF2-205ENST00000556622 WNT8BQ93098 351 aa7.26□□□□□ -1.25
CPSF2-205ENST00000556622 ZNF496Q96IT1 587 aaPredicted RBP7.26□□□□□ -1.25
CPSF2-205ENST00000556622 MAP7D2Q96T17 732 aa7.26□□□□□ -1.25
CPSF2-205ENST00000556622 MEIS3Q99687 375 aa7.26□□□□□ -1.25
CPSF2-205ENST00000556622 ZKSCAN3Q9BRR0 538 aa7.26□□□□□ -1.25
CPSF2-205ENST00000556622 SYT17Q9BSW7 474 aa7.26□□□□□ -1.25
CPSF2-205ENST00000556622 SH2B1Q9NRF2 756 aaPredicted RBP7.26□□□□□ -1.25
CPSF2-205ENST00000556622 HYPKQ9NX55 129 aa7.26□□□□□ -1.25
CPSF2-205ENST00000556622 CCDC39Q9UFE4 941 aa7.26□□□□□ -1.25
CPSF2-205ENST00000556622 ADGRE2Q9UHX3 823 aa7.26□□□□□ -1.25
CPSF2-205ENST00000556622 CPNE3O75131 537 aaKnown RBP7.25□□□□□ -1.25
CPSF2-205ENST00000556622 CYP19A1P11511 503 aaPredicted RBP7.25□□□□□ -1.25
CPSF2-205ENST00000556622 ACPPP15309 386 aa7.25□□□□□ -1.25
CPSF2-205ENST00000556622 PTPRAP18433 802 aa7.25□□□□□ -1.25
CPSF2-205ENST00000556622 INTS5Q6P9B9 1019 aaKnown RBP7.25□□□□□ -1.25
CPSF2-205ENST00000556622 NLGN1Q8N2Q7 840 aa7.25□□□□□ -1.25
CPSF2-205ENST00000556622 TMEM130Q8N3G9 435 aa7.25□□□□□ -1.25
CPSF2-205ENST00000556622 RILPL2Q969X0 211 aa7.25□□□□□ -1.25
CPSF2-205ENST00000556622 OSMRQ99650 979 aa7.25□□□□□ -1.25
CPSF2-205ENST00000556622 MRPL18Q9H0U6 180 aaKnown RBP7.25□□□□□ -1.25
CPSF2-205ENST00000556622 SOX13Q9UN79 622 aa7.25□□□□□ -1.25
CPSF2-205ENST00000556622 RAD50Q92878 1312 aa7.25□□□□□ -1.25
CPSF2-205ENST00000556622 CNTNAP4Q9C0A0 1308 aa7.25□□□□□ -1.25
CPSF2-205ENST00000556622 CEMIPQ8WUJ3 1361 aa7.24□□□□□ -1.25
CPSF2-205ENST00000556622 A0A087WZG4 1122 aa7.24□□□□□ -1.25
CPSF2-205ENST00000556622 TREHO43280 583 aa7.24□□□□□ -1.25
CPSF2-205ENST00000556622 SURF6O75683 361 aaKnown RBP7.24□□□□□ -1.25
CPSF2-205ENST00000556622 CAVIN2O95810 425 aa7.24□□□□□ -1.25
CPSF2-205ENST00000556622 A1BGP04217 495 aa7.24□□□□□ -1.25
CPSF2-205ENST00000556622 SNRPA1P09661 255 aaKnown RBP7.24□□□□□ -1.25
CPSF2-205ENST00000556622 GLB1P16278 677 aa7.24□□□□□ -1.25
CPSF2-205ENST00000556622 CHMLP26374 656 aa7.24□□□□□ -1.25
CPSF2-205ENST00000556622 NEXNQ0ZGT2 675 aa7.24□□□□□ -1.25
CPSF2-205ENST00000556622 OS9Q13438 667 aaPredicted RBP7.24□□□□□ -1.25
CPSF2-205ENST00000556622 MTX1Q13505 466 aa7.24□□□□□ -1.25
CPSF2-205ENST00000556622 OGFOD2Q6N063 350 aa7.24□□□□□ -1.25
CPSF2-205ENST00000556622 LRSAM1Q6UWE0 723 aa7.24□□□□□ -1.25
CPSF2-205ENST00000556622 DTX1Q86Y01 620 aa7.24□□□□□ -1.25
CPSF2-205ENST00000556622 UBL7Q96S82 380 aaPredicted RBP7.24□□□□□ -1.25
CPSF2-205ENST00000556622 KRTAP4-11Q9BYQ6 195 aa7.24□□□□□ -1.25
CPSF2-205ENST00000556622 TM6SF1Q9BZW5 370 aa7.24□□□□□ -1.25
CPSF2-205ENST00000556622 DIAPH3Q9NSV4 1193 aa7.24□□□□□ -1.25
CPSF2-205ENST00000556622 STOML1Q9UBI4 398 aa7.24□□□□□ -1.25
CPSF2-205ENST00000556622 KIF3AQ9Y496 699 aa7.24□□□□□ -1.25
CPSF2-205ENST00000556622 USP16Q9Y5T5 823 aa7.24□□□□□ -1.25
CPSF2-205ENST00000556622 C5P01031 1676 aa7.24□□□□□ -1.25
CPSF2-205ENST00000556622 TAF1LQ8IZX4 1826 aa7.24□□□□□ -1.25
CPSF2-205ENST00000556622 C4BP0C0L5 1744 aa7.24□□□□□ -1.25
CPSF2-205ENST00000556622 SRCAPQ6ZRS2 3230 aa7.23□□□□□ -1.25
CPSF2-205ENST00000556622 A0A1W2PP55 124 aa7.23□□□□□ -1.25
CPSF2-205ENST00000556622 GOLGA6L6A8MZA4 724 aa7.23□□□□□ -1.25
CPSF2-205ENST00000556622 EIF1AYO14602 144 aaKnown RBP7.23□□□□□ -1.25
CPSF2-205ENST00000556622 GSC2O15499 205 aa7.23□□□□□ -1.25
CPSF2-205ENST00000556622 RRP9O43818 475 aaKnown RBP7.23□□□□□ -1.25
CPSF2-205ENST00000556622 MMP10P09238 476 aa7.23□□□□□ -1.25
CPSF2-205ENST00000556622 IFIT2P09913 472 aaKnown RBP7.23□□□□□ -1.25
CPSF2-205ENST00000556622 EPHA1P21709 976 aa7.23□□□□□ -1.25
CPSF2-205ENST00000556622 HSPA4P34932 840 aa7.23□□□□□ -1.25
CPSF2-205ENST00000556622 ORC1Q13415 861 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms