RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 PANK3Q9H999 370 aa7□□□□□ -1.29
TDP1-215ENST00000556498 TCF7L2Q9NQB0 619 aa7□□□□□ -1.29
TDP1-215ENST00000556498 DISC1Q9NRI5 854 aa7□□□□□ -1.29
TDP1-215ENST00000556498 ZNF446Q9NWS9 450 aa7□□□□□ -1.29
TDP1-215ENST00000556498 UBAP1Q9NZ09 502 aa7□□□□□ -1.29
TDP1-215ENST00000556498 SLC45A1Q9Y2W3 748 aa7□□□□□ -1.29
TDP1-215ENST00000556498 PTPRGP23470 1445 aa7□□□□□ -1.29
TDP1-215ENST00000556498 CC2D2AQ9P2K1 1620 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 PNMA6FA0A0J9YX94 578 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 TMEM238LA0A1B0GVL6 79 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 KIF3BO15066 747 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 TTI1O43156 1089 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 AHCYL1O43865 530 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 DIAPH1O60610 1272 aaKnown RBP6.99□□□□□ -1.29
TDP1-215ENST00000556498 MMP20O60882 483 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 CPNE3O75131 537 aaKnown RBP6.99□□□□□ -1.29
TDP1-215ENST00000556498 PHACTR2O75167 634 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 RTN2O75298 545 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 PRPF40AO75400 957 aaKnown RBP6.99□□□□□ -1.29
TDP1-215ENST00000556498 RPS6KA5O75582 802 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 LDHBP07195 334 aaKnown RBP6.99□□□□□ -1.29
TDP1-215ENST00000556498 RPSAP08865 295 aaKnown RBP6.99□□□□□ -1.29
TDP1-215ENST00000556498 RARAP10276 462 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 NFKB1P19838 968 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 RRM1P23921 792 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 GCKP35557 465 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 CORO7P57737 925 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 ARPC4P59998 168 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 HNRNPUQ00839 825 aaKnown RBP eCLIP6.99□□□□□ -1.29
TDP1-215ENST00000556498 RAPGEF1Q13905 1077 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 RNF187Q5TA31 235 aaPredicted RBP6.99□□□□□ -1.29
TDP1-215ENST00000556498 NXNQ6DKJ4 435 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 NEK10Q6ZWH5 1172 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 C1orf127Q8N9H9 656 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 SUN5Q8TC36 379 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 GPT2Q8TD30 523 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.99□□□□□ -1.29
TDP1-215ENST00000556498 PMEPA1Q969W9 287 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 TBC1D31Q96DN5 1066 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 ZMAT2Q96NC0 199 aaKnown RBP6.99□□□□□ -1.29
TDP1-215ENST00000556498 OSBPL9Q96SU4 736 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 SLC7A5P2Q9GIP4 190 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 ARGLU1Q9NWB6 273 aaPredicted RBP6.99□□□□□ -1.29
TDP1-215ENST00000556498 DDX25Q9UHL0 483 aaKnown RBP6.99□□□□□ -1.29
TDP1-215ENST00000556498 CROTQ9UKG9 612 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 RABGAP1Q9Y3P9 1069 aa6.99□□□□□ -1.29
TDP1-215ENST00000556498 DYTNA2CJ06 578 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 H0YC42 278 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 RNASEH2AO75792 299 aaKnown RBP6.98□□□□□ -1.29
TDP1-215ENST00000556498 BMP4P12644 408 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 MX2P20592 715 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 MCM3P25205 808 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 RPL13P26373 211 aaKnown RBP6.98□□□□□ -1.29
TDP1-215ENST00000556498 TSPAN7P41732 249 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 TNNI2P48788 182 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 TPD52P55327 224 aaPredicted RBP6.98□□□□□ -1.29
TDP1-215ENST00000556498 CTAG1AP78358 180 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 CCDC93Q567U6 631 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 FAM133BQ5BKY9 247 aaKnown RBP6.98□□□□□ -1.29
TDP1-215ENST00000556498 CFAP58Q5T655 872 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 USPL1Q5W0Q7 1092 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 ALG1LQ6GMV1 187 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 CCSAPQ6IQ19 270 aaPredicted RBP6.98□□□□□ -1.29
TDP1-215ENST00000556498 RAB44Q7Z6P3 723 aaPredicted RBP6.98□□□□□ -1.29
TDP1-215ENST00000556498 CHPFQ8IZ52 775 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 TTC39CQ8N584 583 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 C3orf20Q8ND61 904 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 OR13H1Q8NG92 308 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 WDR66Q8TBY9 1149 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 ANKRD49Q8WVL7 239 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 ARHGAP45Q92619 1136 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 ZNF496Q96IT1 587 aaPredicted RBP6.98□□□□□ -1.29
TDP1-215ENST00000556498 PAWRQ96IZ0 340 aaKnown RBP6.98□□□□□ -1.29
TDP1-215ENST00000556498 CCDC114Q96M63 670 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 OSBPL10Q9BXB5 764 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 BHMT2Q9H2M3 363 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 MRPL46Q9H2W6 279 aaKnown RBP6.98□□□□□ -1.29
TDP1-215ENST00000556498 SYNCQ9H7C4 482 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 PRKRIP1Q9H875 184 aaPredicted RBP6.98□□□□□ -1.29
TDP1-215ENST00000556498 AS3MTQ9HBK9 375 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 SPTLC3Q9NUV7 552 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 TLR7Q9NYK1 1049 aaKnown RBP6.98□□□□□ -1.29
TDP1-215ENST00000556498 MCM8Q9UJA3 840 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 G3BP2Q9UN86 482 aaKnown RBP6.98□□□□□ -1.29
TDP1-215ENST00000556498 NOSIPQ9Y314 301 aaKnown RBP6.98□□□□□ -1.29
TDP1-215ENST00000556498 TMED5Q9Y3A6 229 aa6.98□□□□□ -1.29
TDP1-215ENST00000556498 SMG6Q86US8 1419 aaKnown RBP6.98□□□□□ -1.29
TDP1-215ENST00000556498 TARSL2A2RTX5 802 aaKnown RBP6.97□□□□□ -1.29
TDP1-215ENST00000556498 EIF3FO00303 357 aaPredicted RBP6.97□□□□□ -1.29
TDP1-215ENST00000556498 FOXN3O00409 490 aaPredicted RBP6.97□□□□□ -1.29
TDP1-215ENST00000556498 ABLIM1O14639 778 aa6.97□□□□□ -1.29
TDP1-215ENST00000556498 NEMFO60524 1076 aa6.97□□□□□ -1.29
TDP1-215ENST00000556498 FGFR1OPO95684 399 aaKnown RBP6.97□□□□□ -1.29
TDP1-215ENST00000556498 CYP2E1P05181 493 aaPredicted RBP6.97□□□□□ -1.29
TDP1-215ENST00000556498 HSPA1AP0DMV8 641 aaKnown RBP6.97□□□□□ -1.29
TDP1-215ENST00000556498 HSPA1BP0DMV9 641 aaKnown RBP6.97□□□□□ -1.29
TDP1-215ENST00000556498 CES1P23141 567 aa6.97□□□□□ -1.29
TDP1-215ENST00000556498 EIF4BP23588 611 aaKnown RBP6.97□□□□□ -1.29
TDP1-215ENST00000556498 TCF7P36402 384 aaPredicted RBP6.97□□□□□ -1.29
TDP1-215ENST00000556498 ATP2B2Q01814 1243 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms