RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 SAPCD2Q86UD0 394 aa10.6□□□□□ -0.71
ACTN1-218ENST00000556343 MB21D1Q8N884 522 aa10.6□□□□□ -0.71
ACTN1-218ENST00000556343 CUL5Q93034 780 aa10.6□□□□□ -0.71
ACTN1-218ENST00000556343 RANBP17Q9H2T7 1088 aaKnown RBP10.6□□□□□ -0.71
ACTN1-218ENST00000556343 FOXP1Q9H334 677 aaPredicted RBP10.6□□□□□ -0.71
ACTN1-218ENST00000556343 MTMR6Q9Y217 621 aa10.6□□□□□ -0.71
ACTN1-218ENST00000556343 SLC45A1Q9Y2W3 748 aa10.6□□□□□ -0.71
ACTN1-218ENST00000556343 MRPL11Q9Y3B7 192 aaKnown RBP10.6□□□□□ -0.71
ACTN1-218ENST00000556343 PCDHA1Q9Y5I3 950 aa10.6□□□□□ -0.71
ACTN1-218ENST00000556343 TLL2Q9Y6L7 1015 aa10.6□□□□□ -0.71
ACTN1-218ENST00000556343 CCL15-CCL14A0A0B4J2E2 113 aa10.59□□□□□ -0.71
ACTN1-218ENST00000556343 hCG_1642624A0A1W2PR95 340 aa10.59□□□□□ -0.71
ACTN1-218ENST00000556343 SMCO2A6NFE2 343 aa10.59□□□□□ -0.71
ACTN1-218ENST00000556343 GOLGA6L22H0YM25 854 aa10.59□□□□□ -0.71
ACTN1-218ENST00000556343 F13A1P00488 732 aa10.59□□□□□ -0.71
ACTN1-218ENST00000556343 MMP1P03956 469 aa10.59□□□□□ -0.71
ACTN1-218ENST00000556343 OAZ1P54368 228 aa10.59□□□□□ -0.71
ACTN1-218ENST00000556343 GUCY1B3Q02153 619 aa10.59□□□□□ -0.71
ACTN1-218ENST00000556343 CCL15Q16663 113 aa10.59□□□□□ -0.71
ACTN1-218ENST00000556343 CSPP1Q1MSJ5 1256 aa10.59□□□□□ -0.71
ACTN1-218ENST00000556343 CNKSR2Q8WXI2 1034 aa10.59□□□□□ -0.71
ACTN1-218ENST00000556343 ZNF396Q96N95 335 aaPredicted RBP10.59□□□□□ -0.71
ACTN1-218ENST00000556343 GBP4Q96PP9 640 aa10.59□□□□□ -0.71
ACTN1-218ENST00000556343 MAF1Q9H063 256 aa10.59□□□□□ -0.71
ACTN1-218ENST00000556343 CPVLQ9H3G5 476 aa10.59□□□□□ -0.71
ACTN1-218ENST00000556343 VPS54Q9P1Q0 977 aa10.59□□□□□ -0.71
ACTN1-218ENST00000556343 DOCK1Q14185 1865 aa10.59□□□□□ -0.71
ACTN1-218ENST00000556343 ABCB11O95342 1321 aa10.58□□□□□ -0.71
ACTN1-218ENST00000556343 ESYT2A0FGR8 921 aa10.58□□□□□ -0.72
ACTN1-218ENST00000556343 STXBP3O00186 592 aa10.58□□□□□ -0.72
ACTN1-218ENST00000556343 ICAM1P05362 532 aa10.58□□□□□ -0.72
ACTN1-218ENST00000556343 COPB2P35606 906 aa10.58□□□□□ -0.72
ACTN1-218ENST00000556343 ADCY7P51828 1080 aa10.58□□□□□ -0.72
ACTN1-218ENST00000556343 SREBF2Q12772 1141 aa10.58□□□□□ -0.72
ACTN1-218ENST00000556343 TKFCQ3LXA3 575 aa10.58□□□□□ -0.72
ACTN1-218ENST00000556343 WWC2Q6AWC2 1192 aa10.58□□□□□ -0.72
ACTN1-218ENST00000556343 ATL3Q6DD88 541 aa10.58□□□□□ -0.72
ACTN1-218ENST00000556343 CCDC174Q6PII3 467 aa10.58□□□□□ -0.72
ACTN1-218ENST00000556343 PAXIP1Q6ZW49 1069 aaPredicted RBP10.58□□□□□ -0.72
ACTN1-218ENST00000556343 RASGRP2Q7LDG7 609 aa10.58□□□□□ -0.72
ACTN1-218ENST00000556343 ANKRD23Q86SG2 305 aa10.58□□□□□ -0.72
ACTN1-218ENST00000556343 MCF2L2Q86YR7 1114 aa10.58□□□□□ -0.72
ACTN1-218ENST00000556343 REM2Q8IYK8 340 aaPredicted RBP10.58□□□□□ -0.72
ACTN1-218ENST00000556343 SAMD3Q8N6K7 520 aa10.58□□□□□ -0.72
ACTN1-218ENST00000556343 GPKOWQ92917 476 aaPredicted RBP eCLIP10.58□□□□□ -0.72
ACTN1-218ENST00000556343 COA7Q96BR5 231 aa10.58□□□□□ -0.72
ACTN1-218ENST00000556343 AIFM3Q96NN9 605 aa10.58□□□□□ -0.72
ACTN1-218ENST00000556343 PHF20Q9BVI0 1012 aa10.58□□□□□ -0.72
ACTN1-218ENST00000556343 ZMYND12Q9H0C1 365 aa10.58□□□□□ -0.72
ACTN1-218ENST00000556343 SLC38A10Q9HBR0 1119 aa10.58□□□□□ -0.72
ACTN1-218ENST00000556343 CFAP45Q9UL16 551 aa10.58□□□□□ -0.72
ACTN1-218ENST00000556343 CCPG1Q9ULG6 757 aa10.58□□□□□ -0.72
ACTN1-218ENST00000556343 NOL7Q9UMY1 257 aaKnown RBP10.58□□□□□ -0.72
ACTN1-218ENST00000556343 PCDHA4Q9UN74 947 aa10.58□□□□□ -0.72
ACTN1-218ENST00000556343 MYH4Q9Y623 1939 aa10.58□□□□□ -0.72
ACTN1-218ENST00000556343 CCDC194A0A1B0GVG4 234 aa10.57□□□□□ -0.72
ACTN1-218ENST00000556343 VWA5AO00534 786 aa10.57□□□□□ -0.72
ACTN1-218ENST00000556343 PTMSP20962 102 aa10.57□□□□□ -0.72
ACTN1-218ENST00000556343 GJA5P36382 358 aa10.57□□□□□ -0.72
ACTN1-218ENST00000556343 APLP1P51693 650 aa10.57□□□□□ -0.72
ACTN1-218ENST00000556343 MKRN3Q13064 507 aaKnown RBP10.57□□□□□ -0.72
ACTN1-218ENST00000556343 TREML2Q5T2D2 321 aa10.57□□□□□ -0.72
ACTN1-218ENST00000556343 FOXD4L5Q5VV16 416 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-218ENST00000556343 DIS3L2Q8IYB7 885 aaKnown RBP10.57□□□□□ -0.72
ACTN1-218ENST00000556343 BLIDQ8IZY5 108 aa10.57□□□□□ -0.72
ACTN1-218ENST00000556343 DAGLBQ8NCG7 672 aa10.57□□□□□ -0.72
ACTN1-218ENST00000556343 FOXD4L4Q8WXT5 416 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-218ENST00000556343 PSTPIP2Q9H939 334 aa10.57□□□□□ -0.72
ACTN1-218ENST00000556343 EHMT1Q9H9B1 1298 aa10.57□□□□□ -0.72
ACTN1-218ENST00000556343 ZCCHC17Q9NP64 241 aaKnown RBP10.57□□□□□ -0.72
ACTN1-218ENST00000556343 RIC8AQ9NPQ8 531 aa10.57□□□□□ -0.72
ACTN1-218ENST00000556343 CREBZFQ9NS37 354 aa10.57□□□□□ -0.72
ACTN1-218ENST00000556343 FBXO28Q9NVF7 368 aa10.57□□□□□ -0.72
ACTN1-218ENST00000556343 MAP3K20Q9NYL2 800 aaKnown RBP10.57□□□□□ -0.72
ACTN1-218ENST00000556343 KCNJ14Q9UNX9 436 aa10.57□□□□□ -0.72
ACTN1-218ENST00000556343 TESPA1A2RU30 521 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-218ENST00000556343 PDHXO00330 501 aa10.56□□□□□ -0.72
ACTN1-218ENST00000556343 DTNBO60941 627 aa10.56□□□□□ -0.72
ACTN1-218ENST00000556343 FOSP01100 380 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-218ENST00000556343 SLC10A3P09131 477 aa10.56□□□□□ -0.72
ACTN1-218ENST00000556343 U2AF2P26368 475 aaKnown RBP eCLIP10.56□□□□□ -0.72
ACTN1-218ENST00000556343 STAT3P40763 770 aa10.56□□□□□ -0.72
ACTN1-218ENST00000556343 SNAP25P60880 206 aa10.56□□□□□ -0.72
ACTN1-218ENST00000556343 KRT85P78386 507 aa10.56□□□□□ -0.72
ACTN1-218ENST00000556343 KIF23Q02241 960 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-218ENST00000556343 PLS1Q14651 629 aa10.56□□□□□ -0.72
ACTN1-218ENST00000556343 SLC35G1Q2M3R5 365 aa10.56□□□□□ -0.72
ACTN1-218ENST00000556343 DEFB115Q30KQ5 88 aa10.56□□□□□ -0.72
ACTN1-218ENST00000556343 USH1GQ495M9 461 aa10.56□□□□□ -0.72
ACTN1-218ENST00000556343 LBX2Q6XYB7 198 aa10.56□□□□□ -0.72
ACTN1-218ENST00000556343 KRT25Q7Z3Z0 450 aa10.56□□□□□ -0.72
ACTN1-218ENST00000556343 FERMT3Q86UX7 667 aa10.56□□□□□ -0.72
ACTN1-218ENST00000556343 RASAL3Q86YV0 1011 aa10.56□□□□□ -0.72
ACTN1-218ENST00000556343 NOSTRINQ8IVI9 506 aa10.56□□□□□ -0.72
ACTN1-218ENST00000556343 CPXCR1Q8N123 301 aa10.56□□□□□ -0.72
ACTN1-218ENST00000556343 REXO1Q8N1G1 1221 aaKnown RBP10.56□□□□□ -0.72
ACTN1-218ENST00000556343 TNPO1Q92973 898 aaKnown RBP10.56□□□□□ -0.72
ACTN1-218ENST00000556343 MS4A4AQ96JQ5 239 aa10.56□□□□□ -0.72
ACTN1-218ENST00000556343 PARK7Q99497 189 aaKnown RBP10.56□□□□□ -0.72
ACTN1-218ENST00000556343 TEX13BQ9BXU2 312 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms