RNA–Protein interactions for RNA: ENST00000556296.1

APEX1-213, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 4

Gene APEX1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-213ENST00000556296 PTH1RQ03431 593 aa15□□□□□ -0.01
APEX1-213ENST00000556296 KLRC3Q07444 240 aa15□□□□□ -0.01
APEX1-213ENST00000556296 ZNF467Q7Z7K2 595 aaPredicted RBP15□□□□□ -0.01
APEX1-213ENST00000556296 LSG1Q9H089 658 aaKnown RBP15□□□□□ -0.01
APEX1-213ENST00000556296 TMEM39AQ9NV64 488 aa15□□□□□ -0.01
APEX1-213ENST00000556296 CLIP2Q9UDT6 1046 aa15□□□□□ -0.01
APEX1-213ENST00000556296 FEM1BQ9UK73 627 aa15□□□□□ -0.01
APEX1-213ENST00000556296 MROH7Q68CQ1 1323 aa14.99□□□□□ -0.01
APEX1-213ENST00000556296 COL6A3P12111 3177 aa14.99□□□□□ -0.01
APEX1-213ENST00000556296 IGKV6D-41A0A0C4DH26 115 aa14.99□□□□□ -0.01
APEX1-213ENST00000556296 PQBP1O60828 265 aaKnown RBP14.99□□□□□ -0.01
APEX1-213ENST00000556296 PGK1P00558 417 aa14.99□□□□□ -0.01
APEX1-213ENST00000556296 SLC4A3P48751 1232 aa14.99□□□□□ -0.01
APEX1-213ENST00000556296 PDE4BQ07343 736 aa14.99□□□□□ -0.01
APEX1-213ENST00000556296 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.99□□□□□ -0.01
APEX1-213ENST00000556296 ANKRD35Q8N283 1001 aa14.99□□□□□ -0.01
APEX1-213ENST00000556296 MAP4K1Q92918 833 aa14.99□□□□□ -0.01
APEX1-213ENST00000556296 FAM161BQ96MY7 647 aa14.99□□□□□ -0.01
APEX1-213ENST00000556296 TOX2Q96NM4 488 aa14.99□□□□□ -0.01
APEX1-213ENST00000556296 STARD7Q9NQZ5 370 aa14.99□□□□□ -0.01
APEX1-213ENST00000556296 ZHX1Q9UKY1 873 aaPredicted RBP14.99□□□□□ -0.01
APEX1-213ENST00000556296 TMEM265A0A087WTH1 108 aa14.98□□□□□ -0.01
APEX1-213ENST00000556296 A0A1W2PQ45 241 aaPredicted RBP14.98□□□□□ -0.01
APEX1-213ENST00000556296 A0A1W2PQY0 241 aa14.98□□□□□ -0.01
APEX1-213ENST00000556296 TRIM43BA6NCK2 446 aa14.98□□□□□ -0.01
APEX1-213ENST00000556296 ATP2A1O14983 1001 aa14.98□□□□□ -0.01
APEX1-213ENST00000556296 TTLL1O95922 423 aa14.98□□□□□ -0.01
APEX1-213ENST00000556296 NDUFB10O96000 172 aa14.98□□□□□ -0.01
APEX1-213ENST00000556296 ZNF865P0CJ78 1059 aaPredicted RBP14.98□□□□□ -0.01
APEX1-213ENST00000556296 OAZ1P54368 228 aa14.98□□□□□ -0.01
APEX1-213ENST00000556296 PPARAQ07869 468 aa14.98□□□□□ -0.01
APEX1-213ENST00000556296 IMMTQ16891 758 aaKnown RBP14.98□□□□□ -0.01
APEX1-213ENST00000556296 CPXCR1Q8N123 301 aa14.98□□□□□ -0.01
APEX1-213ENST00000556296 STK11IPQ8N1F8 1099 aa14.98□□□□□ -0.01
APEX1-213ENST00000556296 PCSK9Q8NBP7 692 aaKnown RBP14.98□□□□□ -0.01
APEX1-213ENST00000556296 CHST13Q8NET6 341 aa14.98□□□□□ -0.01
APEX1-213ENST00000556296 REPS2Q8NFH8 660 aa14.98□□□□□ -0.01
APEX1-213ENST00000556296 KIFC2Q96AC6 838 aa14.98□□□□□ -0.01
APEX1-213ENST00000556296 TRIM43Q96BQ3 446 aaPredicted RBP14.98□□□□□ -0.01
APEX1-213ENST00000556296 RNPC3Q96LT9 517 aaKnown RBP14.98□□□□□ -0.01
APEX1-213ENST00000556296 GLT1D1Q96MS3 346 aa14.98□□□□□ -0.01
APEX1-213ENST00000556296 GUCD1Q96NT3 240 aa14.98□□□□□ -0.01
APEX1-213ENST00000556296 RBM8AQ9Y5S9 174 aaKnown RBP14.98□□□□□ -0.01
APEX1-213ENST00000556296 A0A0C4DFX4 3053 aa14.97□□□□□ -0.01
APEX1-213ENST00000556296 DNAH12Q6ZR08 3092 aa14.97□□□□□ -0.01
APEX1-213ENST00000556296 LAMA4Q16363 1823 aa14.97□□□□□ -0.01
APEX1-213ENST00000556296 ZNF213O14771 459 aa14.97□□□□□ -0.01
APEX1-213ENST00000556296 KIAA0355O15063 1070 aa14.97□□□□□ -0.01
APEX1-213ENST00000556296 DUSP11O75319 330 aaKnown RBP14.97□□□□□ -0.01
APEX1-213ENST00000556296 TSPY3P0CV98 308 aa14.97□□□□□ -0.01
APEX1-213ENST00000556296 TSPY8P0CW00 308 aa14.97□□□□□ -0.01
APEX1-213ENST00000556296 ACLYP53396 1101 aa14.97□□□□□ -0.01
APEX1-213ENST00000556296 FPGSQ05932 587 aa14.97□□□□□ -0.01
APEX1-213ENST00000556296 RNF20Q5VTR2 975 aa14.97□□□□□ -0.01
APEX1-213ENST00000556296 MAMDC4Q6UXC1 1216 aa14.97□□□□□ -0.01
APEX1-213ENST00000556296 MKL1Q969V6 931 aa14.97□□□□□ -0.01
APEX1-213ENST00000556296 VTI1AQ96AJ9 217 aa14.97□□□□□ -0.01
APEX1-213ENST00000556296 SEMA6BQ9H3T3 888 aa14.97□□□□□ -0.01
APEX1-213ENST00000556296 ABHD16BQ9H3Z7 469 aa14.97□□□□□ -0.01
APEX1-213ENST00000556296 ISY1Q9ULR0 285 aaKnown RBP14.97□□□□□ -0.01
APEX1-213ENST00000556296 TAL1P17542 331 aaPredicted RBP14.96□□□□□ -0.01
APEX1-213ENST00000556296 ACVR2BQ13705 512 aa14.96□□□□□ -0.01
APEX1-213ENST00000556296 C9orf50Q5SZB4 431 aa14.96□□□□□ -0.01
APEX1-213ENST00000556296 ANKRD33Q7Z3H0 272 aa14.96□□□□□ -0.01
APEX1-213ENST00000556296 SH3RF1Q7Z6J0 888 aa14.96□□□□□ -0.01
APEX1-213ENST00000556296 GMCL1P1Q8NEA9 526 aa14.96□□□□□ -0.01
APEX1-213ENST00000556296 CHURC1Q8WUH1 139 aa14.96□□□□□ -0.01
APEX1-213ENST00000556296 NUP88Q99567 741 aaPredicted RBP14.96□□□□□ -0.01
APEX1-213ENST00000556296 CDX2Q99626 313 aaPredicted RBP14.96□□□□□ -0.01
APEX1-213ENST00000556296 SLC38A10Q9HBR0 1119 aa14.96□□□□□ -0.01
APEX1-213ENST00000556296 MTMR4Q9NYA4 1195 aa14.96□□□□□ -0.01
APEX1-213ENST00000556296 ANAPC4Q9UJX5 808 aa14.96□□□□□ -0.01
APEX1-213ENST00000556296 PLIN4Q96Q06 1357 aa14.96□□□□□ -0.02
APEX1-213ENST00000556296 ELP1O95163 1332 aa14.95□□□□□ -0.02
APEX1-213ENST00000556296 TLR3O15455 904 aaKnown RBP14.95□□□□□ -0.02
APEX1-213ENST00000556296 ADAMTS4O75173 837 aa14.95□□□□□ -0.02
APEX1-213ENST00000556296 PCP11498 1178 aaKnown RBP14.95□□□□□ -0.02
APEX1-213ENST00000556296 BMP3P12645 472 aa14.95□□□□□ -0.02
APEX1-213ENST00000556296 MCCP23508 829 aa14.95□□□□□ -0.02
APEX1-213ENST00000556296 HAND2P61296 217 aa14.95□□□□□ -0.02
APEX1-213ENST00000556296 IKQ13123 557 aaPredicted RBP14.95□□□□□ -0.02
APEX1-213ENST00000556296 KCNA10Q16322 511 aa14.95□□□□□ -0.02
APEX1-213ENST00000556296 SLFN13Q68D06 897 aa14.95□□□□□ -0.02
APEX1-213ENST00000556296 FAM160B2Q86V87 743 aa14.95□□□□□ -0.02
APEX1-213ENST00000556296 RNF41Q9H4P4 317 aaPredicted RBP14.95□□□□□ -0.02
APEX1-213ENST00000556296 UPF2Q9HAU5 1272 aaKnown RBP14.95□□□□□ -0.02
APEX1-213ENST00000556296 RAVER2Q9HCJ3 691 aaKnown RBP14.95□□□□□ -0.02
APEX1-213ENST00000556296 DNAJC25-GNG10A0A024R161 153 aa14.94□□□□□ -0.02
APEX1-213ENST00000556296 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.94□□□□□ -0.02
APEX1-213ENST00000556296 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.94□□□□□ -0.02
APEX1-213ENST00000556296 PRDM1O75626 825 aa14.94□□□□□ -0.02
APEX1-213ENST00000556296 SNAI1O95863 264 aaPredicted RBP14.94□□□□□ -0.02
APEX1-213ENST00000556296 C6orf222P0C671 652 aaPredicted RBP14.94□□□□□ -0.02
APEX1-213ENST00000556296 STAT2P52630 851 aa14.94□□□□□ -0.02
APEX1-213ENST00000556296 NECTIN1Q15223 517 aa14.94□□□□□ -0.02
APEX1-213ENST00000556296 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.94□□□□□ -0.02
APEX1-213ENST00000556296 KLHDC9Q8NEP7 349 aa14.94□□□□□ -0.02
APEX1-213ENST00000556296 MAFAQ8NHW3 353 aaPredicted RBP14.94□□□□□ -0.02
APEX1-213ENST00000556296 CEP95Q96GE4 821 aa14.94□□□□□ -0.02
APEX1-213ENST00000556296 USP26Q9BXU7 913 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms