RNA–Protein interactions for RNA: ENST00000556249.1

SDR39U1-217, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-217ENST00000556249 TTF1Q15361 905 aaPredicted RBP18.99■□□□□ 0.63
SDR39U1-217ENST00000556249 RAB30Q15771 203 aa18.99■□□□□ 0.63
SDR39U1-217ENST00000556249 GNASQ5JWF2 1037 aa18.99■□□□□ 0.63
SDR39U1-217ENST00000556249 SNRNP48Q6IEG0 339 aaKnown RBP18.99■□□□□ 0.63
SDR39U1-217ENST00000556249 TMED8Q6PL24 325 aaPredicted RBP18.99■□□□□ 0.63
SDR39U1-217ENST00000556249 HERVK_113Q902F9 699 aa18.99■□□□□ 0.63
SDR39U1-217ENST00000556249 IL23AQ9NPF7 189 aa18.99■□□□□ 0.63
SDR39U1-217ENST00000556249 SYNGAP1Q96PV0 1343 aa18.99■□□□□ 0.63
SDR39U1-217ENST00000556249 A0A0U1RQG5 324 aaPredicted RBP18.98■□□□□ 0.63
SDR39U1-217ENST00000556249 USP17L12C9JPN9 530 aa18.98■□□□□ 0.63
SDR39U1-217ENST00000556249 USP17L21D6R901 530 aa18.98■□□□□ 0.63
SDR39U1-217ENST00000556249 MBD4O95243 580 aa18.98■□□□□ 0.63
SDR39U1-217ENST00000556249 BMP1P13497 986 aa18.98■□□□□ 0.63
SDR39U1-217ENST00000556249 CST5P28325 142 aaPredicted RBP18.98■□□□□ 0.63
SDR39U1-217ENST00000556249 KCNQ1P51787 676 aa18.98■□□□□ 0.63
SDR39U1-217ENST00000556249 BEX3Q00994 111 aa18.98■□□□□ 0.63
SDR39U1-217ENST00000556249 CCDC144BQ3MJ40 725 aa18.98■□□□□ 0.63
SDR39U1-217ENST00000556249 C12orf60Q5U649 245 aa18.98■□□□□ 0.63
SDR39U1-217ENST00000556249 MAMDC4Q6UXC1 1216 aa18.98■□□□□ 0.63
SDR39U1-217ENST00000556249 CPXCR1Q8N123 301 aa18.98■□□□□ 0.63
SDR39U1-217ENST00000556249 MSL3Q8N5Y2 521 aaKnown RBP18.98■□□□□ 0.63
SDR39U1-217ENST00000556249 PCSK9Q8NBP7 692 aaKnown RBP18.98■□□□□ 0.63
SDR39U1-217ENST00000556249 CCDC17Q96LX7 622 aa18.98■□□□□ 0.63
SDR39U1-217ENST00000556249 GOPCQ9HD26 462 aa18.98■□□□□ 0.63
SDR39U1-217ENST00000556249 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.98■□□□□ 0.63
SDR39U1-217ENST00000556249 GBF1Q92538 1859 aa18.98■□□□□ 0.63
SDR39U1-217ENST00000556249 BAZ2AQ9UIF9 1905 aaKnown RBP18.98■□□□□ 0.63
SDR39U1-217ENST00000556249 CHD9Q3L8U1 2897 aa18.97■□□□□ 0.63
SDR39U1-217ENST00000556249 DNAJC25-GNG10A0A024R161 153 aa18.97■□□□□ 0.63
SDR39U1-217ENST00000556249 FGBP02675 491 aa18.97■□□□□ 0.63
SDR39U1-217ENST00000556249 PTGS1P23219 599 aa18.97■□□□□ 0.63
SDR39U1-217ENST00000556249 CCL23P55773 120 aa18.97■□□□□ 0.63
SDR39U1-217ENST00000556249 TEX13BQ9BXU2 312 aa18.97■□□□□ 0.63
SDR39U1-217ENST00000556249 KANSL2Q9H9L4 492 aa18.97■□□□□ 0.63
SDR39U1-217ENST00000556249 XIRP2A4UGR9 3374 aa18.96■□□□□ 0.63
SDR39U1-217ENST00000556249 CTAGE5O15320 804 aa18.96■□□□□ 0.63
SDR39U1-217ENST00000556249 TLR3O15455 904 aaKnown RBP18.96■□□□□ 0.63
SDR39U1-217ENST00000556249 CD4P01730 458 aa18.96■□□□□ 0.63
SDR39U1-217ENST00000556249 IFIT2P09913 472 aaKnown RBP18.96■□□□□ 0.63
SDR39U1-217ENST00000556249 PDE4AP27815 886 aa18.96■□□□□ 0.63
SDR39U1-217ENST00000556249 COPB2P35606 906 aa18.96■□□□□ 0.63
SDR39U1-217ENST00000556249 GJA9P57773 515 aa18.96■□□□□ 0.63
SDR39U1-217ENST00000556249 SKIV2LQ15477 1246 aaKnown RBP18.96■□□□□ 0.63
SDR39U1-217ENST00000556249 C16orf86Q6ZW13 317 aa18.96■□□□□ 0.63
SDR39U1-217ENST00000556249 STK11IPQ8N1F8 1099 aa18.96■□□□□ 0.63
SDR39U1-217ENST00000556249 FGD4Q96M96 766 aa18.96■□□□□ 0.63
SDR39U1-217ENST00000556249 SLF1Q9BQI6 1058 aa18.96■□□□□ 0.63
SDR39U1-217ENST00000556249 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.96■□□□□ 0.63
SDR39U1-217ENST00000556249 SPC25Q9HBM1 224 aa18.96■□□□□ 0.63
SDR39U1-217ENST00000556249 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.95■□□□□ 0.62
SDR39U1-217ENST00000556249 RFXAPO00287 272 aa18.95■□□□□ 0.62
SDR39U1-217ENST00000556249 CXCL17Q6UXB2 119 aa18.95■□□□□ 0.62
SDR39U1-217ENST00000556249 UPF3AQ9H1J1 476 aaKnown RBP18.95■□□□□ 0.62
SDR39U1-217ENST00000556249 HIPK3Q9H422 1215 aa18.95■□□□□ 0.62
SDR39U1-217ENST00000556249 EPHX3Q9H6B9 360 aa18.95■□□□□ 0.62
SDR39U1-217ENST00000556249 RAVER2Q9HCJ3 691 aaKnown RBP18.95■□□□□ 0.62
SDR39U1-217ENST00000556249 ATP8A2Q9NTI2 1148 aa18.95■□□□□ 0.62
SDR39U1-217ENST00000556249 MCM3APO60318 1980 aa18.95■□□□□ 0.62
SDR39U1-217ENST00000556249 HOXD11P31277 338 aaPredicted RBP18.94■□□□□ 0.62
SDR39U1-217ENST00000556249 PPP2R2DQ66LE6 453 aa18.94■□□□□ 0.62
SDR39U1-217ENST00000556249 ARMCX2Q7L311 632 aa18.94■□□□□ 0.62
SDR39U1-217ENST00000556249 C1QTNF1Q9BXJ1 281 aa18.94■□□□□ 0.62
SDR39U1-217ENST00000556249 TSPYL2Q9H2G4 693 aaPredicted RBP18.94■□□□□ 0.62
SDR39U1-217ENST00000556249 ABHD16BQ9H3Z7 469 aa18.94■□□□□ 0.62
SDR39U1-217ENST00000556249 NCOR1O75376 2440 aa18.93■□□□□ 0.62
SDR39U1-217ENST00000556249 REV3LO60673 3130 aa18.93■□□□□ 0.62
SDR39U1-217ENST00000556249 NOL8Q76FK4 1167 aaKnown RBP18.93■□□□□ 0.62
SDR39U1-217ENST00000556249 ZNF467Q7Z7K2 595 aaPredicted RBP18.93■□□□□ 0.62
SDR39U1-217ENST00000556249 CCDC144CPQ8IYA2 1237 aa18.93■□□□□ 0.62
SDR39U1-217ENST00000556249 ANKRD35Q8N283 1001 aa18.93■□□□□ 0.62
SDR39U1-217ENST00000556249 GPATCH3Q96I76 525 aa18.93■□□□□ 0.62
SDR39U1-217ENST00000556249 TRPV6Q9H1D0 765 aa18.93■□□□□ 0.62
SDR39U1-217ENST00000556249 MTIF3Q9H2K0 278 aaKnown RBP18.93■□□□□ 0.62
SDR39U1-217ENST00000556249 CERS4Q9HA82 394 aa18.93■□□□□ 0.62
SDR39U1-217ENST00000556249 DDX49Q9Y6V7 483 aaKnown RBP18.93■□□□□ 0.62
SDR39U1-217ENST00000556249 SALL3Q9BXA9 1300 aa18.93■□□□□ 0.62
SDR39U1-217ENST00000556249 CHD7Q9P2D1 2997 aa18.93■□□□□ 0.62
SDR39U1-217ENST00000556249 F5H6K3 240 aa18.92■□□□□ 0.62
SDR39U1-217ENST00000556249 NDUFB10O96000 172 aa18.92■□□□□ 0.62
SDR39U1-217ENST00000556249 MX1P20591 662 aa18.92■□□□□ 0.62
SDR39U1-217ENST00000556249 ADD2P35612 726 aa18.92■□□□□ 0.62
SDR39U1-217ENST00000556249 KLRC3Q07444 240 aa18.92■□□□□ 0.62
SDR39U1-217ENST00000556249 CTR9Q6PD62 1173 aa18.92■□□□□ 0.62
SDR39U1-217ENST00000556249 SKAP1Q86WV1 359 aa18.92■□□□□ 0.62
SDR39U1-217ENST00000556249 PLEKHM2Q8IWE5 1019 aa18.92■□□□□ 0.62
SDR39U1-217ENST00000556249 AMOTL1Q8IY63 956 aa18.92■□□□□ 0.62
SDR39U1-217ENST00000556249 KIFC2Q96AC6 838 aa18.92■□□□□ 0.62
SDR39U1-217ENST00000556249 KATNBL1Q9H079 304 aa18.92■□□□□ 0.62
SDR39U1-217ENST00000556249 WNT8AQ9H1J5 351 aa18.92■□□□□ 0.62
SDR39U1-217ENST00000556249 BOLA2Q9H3K6 86 aa18.92■□□□□ 0.62
SDR39U1-217ENST00000556249 SLC4A4Q9Y6R1 1079 aa18.92■□□□□ 0.62
SDR39U1-217ENST00000556249 ASTN1O14525 1302 aa18.92■□□□□ 0.62
SDR39U1-217ENST00000556249 GRIN2DO15399 1336 aa18.92■□□□□ 0.62
SDR39U1-217ENST00000556249 ZBBXA8MT70 800 aa18.91■□□□□ 0.62
SDR39U1-217ENST00000556249 PSMC6P62333 389 aa18.91■□□□□ 0.62
SDR39U1-217ENST00000556249 CNTN2Q02246 1040 aa18.91■□□□□ 0.62
SDR39U1-217ENST00000556249 KRT40Q6A162 431 aa18.91■□□□□ 0.62
SDR39U1-217ENST00000556249 PRPF38AQ8NAV1 312 aaKnown RBP18.91■□□□□ 0.62
SDR39U1-217ENST00000556249 OTUD7AQ8TE49 926 aaPredicted RBP18.91■□□□□ 0.62
SDR39U1-217ENST00000556249 VWCEQ96DN2 955 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms