RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 FAM178BQ8IXR5 827 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 RPUSD2Q8IZ73 545 aaKnown RBP11.78□□□□□ -0.52
ACTN1-216ENST00000556083 SPZ1Q9BXG8 430 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 KANSL2Q9H9L4 492 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 TYW5A2RUC4 315 aaKnown RBP11.78□□□□□ -0.52
ACTN1-216ENST00000556083 A1BGP04217 495 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 H2AFZP0C0S5 128 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 SRGAP2BP0DMP2 458 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 PLCB4Q15147 1175 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 RINT1Q6NUQ1 792 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 H2AFVQ71UI9 128 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 FAM160B2Q86V87 743 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 VSIG1Q86XK7 387 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 TRIM50Q86XT4 487 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 MICALL1Q8N3F8 863 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 TGFBRAP1Q8WUH2 860 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 TTC1Q99614 292 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 CBX8Q9HC52 389 aa11.78□□□□□ -0.52
ACTN1-216ENST00000556083 KDM5AP29375 1690 aaKnown RBP11.78□□□□□ -0.52
ACTN1-216ENST00000556083 NCAPD2Q15021 1401 aa11.77□□□□□ -0.52
ACTN1-216ENST00000556083 ICA1Q05084 483 aa11.77□□□□□ -0.52
ACTN1-216ENST00000556083 PHLDB3Q6NSJ2 640 aa11.77□□□□□ -0.52
ACTN1-216ENST00000556083 CACTINQ8WUQ7 758 aaKnown RBP11.77□□□□□ -0.52
ACTN1-216ENST00000556083 RSAD2Q8WXG1 361 aa11.77□□□□□ -0.52
ACTN1-216ENST00000556083 MID2Q9UJV3 735 aa11.77□□□□□ -0.52
ACTN1-216ENST00000556083 GOLGA8KD6RF30 607 aa11.77□□□□□ -0.53
ACTN1-216ENST00000556083 PDE8BO95263 885 aa11.77□□□□□ -0.53
ACTN1-216ENST00000556083 HARSP12081 509 aaKnown RBP11.77□□□□□ -0.53
ACTN1-216ENST00000556083 OSBPP22059 807 aa11.77□□□□□ -0.53
ACTN1-216ENST00000556083 RCAN1P53805 252 aa11.77□□□□□ -0.53
ACTN1-216ENST00000556083 SP4Q02446 784 aa11.77□□□□□ -0.53
ACTN1-216ENST00000556083 BIRC2Q13490 618 aa11.77□□□□□ -0.53
ACTN1-216ENST00000556083 HSP90AA4PQ58FG1 418 aa11.77□□□□□ -0.53
ACTN1-216ENST00000556083 GPBP1Q86WP2 473 aa11.77□□□□□ -0.53
ACTN1-216ENST00000556083 USP17L12C9JPN9 530 aa11.77□□□□□ -0.53
ACTN1-216ENST00000556083 USP17L21D6R901 530 aa11.77□□□□□ -0.53
ACTN1-216ENST00000556083 RFX1P22670 979 aa11.77□□□□□ -0.53
ACTN1-216ENST00000556083 FAM26FQ5R3K3 315 aa11.77□□□□□ -0.53
ACTN1-216ENST00000556083 MAPKAPK5Q8IW41 473 aa11.77□□□□□ -0.53
ACTN1-216ENST00000556083 MED4Q9NPJ6 270 aa11.77□□□□□ -0.53
ACTN1-216ENST00000556083 PLEKHG2Q9H7P9 1386 aa11.77□□□□□ -0.53
ACTN1-216ENST00000556083 RGS12O14924 1447 aa11.77□□□□□ -0.53
ACTN1-216ENST00000556083 MFAP3P55082 362 aa11.77□□□□□ -0.53
ACTN1-216ENST00000556083 KLRF2D3W0D1 207 aa11.76□□□□□ -0.53
ACTN1-216ENST00000556083 STAM2O75886 525 aa11.76□□□□□ -0.53
ACTN1-216ENST00000556083 PTK2Q05397 1052 aa11.76□□□□□ -0.53
ACTN1-216ENST00000556083 PRPSAP1Q14558 356 aa11.76□□□□□ -0.53
ACTN1-216ENST00000556083 KCTD2Q14681 263 aa11.76□□□□□ -0.53
ACTN1-216ENST00000556083 PPP4R3CPQ6ZMV5 832 aa11.76□□□□□ -0.53
ACTN1-216ENST00000556083 CABS1Q96KC9 395 aa11.76□□□□□ -0.53
ACTN1-216ENST00000556083 FAM193BQ96PV7 902 aaPredicted RBP11.76□□□□□ -0.53
ACTN1-216ENST00000556083 PPP1R12CQ9BZL4 782 aa11.76□□□□□ -0.53
ACTN1-216ENST00000556083 NBPF3Q9H094 633 aa11.76□□□□□ -0.53
ACTN1-216ENST00000556083 TMEM191BP0C7N4 346 aa11.76□□□□□ -0.53
ACTN1-216ENST00000556083 KRT15P19012 456 aa11.76□□□□□ -0.53
ACTN1-216ENST00000556083 GKAP1Q5VSY0 366 aaPredicted RBP11.76□□□□□ -0.53
ACTN1-216ENST00000556083 ARMC9Q7Z3E5 817 aa11.76□□□□□ -0.53
ACTN1-216ENST00000556083 CCDC68Q9H2F9 335 aa11.76□□□□□ -0.53
ACTN1-216ENST00000556083 EFCAB6Q5THR3 1501 aa11.76□□□□□ -0.53
ACTN1-216ENST00000556083 APBA3O96018 575 aa11.76□□□□□ -0.53
ACTN1-216ENST00000556083 CEP85LQ5SZL2 805 aa11.76□□□□□ -0.53
ACTN1-216ENST00000556083 Q9H521 79 aa11.76□□□□□ -0.53
ACTN1-216ENST00000556083 ABCC12Q96J65 1359 aa11.76□□□□□ -0.53
ACTN1-216ENST00000556083 CCDC160A6NGH7 325 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 IKBKBO14920 756 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 FDX1P10109 184 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 RXRAP19793 462 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 SLFN13Q68D06 897 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 CLEC4GQ6UXB4 293 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 CPXCR1Q8N123 301 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 FAM227BQ96M60 508 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 MYO3BQ8WXR4 1341 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 DISP1Q96F81 1524 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 ZNF804BA4D1E1 1349 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 TNKSO95271 1327 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 OATP04181 439 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 CDC25BP30305 580 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 GTF2IP78347 998 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 BEND3Q5T5X7 828 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 EFCAB13Q8IY85 973 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 RASSF4Q9H2L5 321 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 JRKLQ9Y4A0 524 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 AFG3L2Q9Y4W6 797 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 KCNJ18B7U540 433 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 HMGB3O15347 200 aaKnown RBP11.75□□□□□ -0.53
ACTN1-216ENST00000556083 FBLN1P23142 703 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 GTF2A1P52655 376 aaPredicted RBP11.75□□□□□ -0.53
ACTN1-216ENST00000556083 KCNJ12Q14500 433 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 TPH2Q8IWU9 490 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 SRRM1Q8IYB3 904 aaKnown RBP11.75□□□□□ -0.53
ACTN1-216ENST00000556083 PASKQ96RG2 1323 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 CAPN9O14815 690 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 TLR3O15455 904 aaKnown RBP11.75□□□□□ -0.53
ACTN1-216ENST00000556083 ATP2C2O75185 946 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 INPP5BP32019 993 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 COPB2P35606 906 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 GABPAQ06546 454 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 UAP1Q16222 522 aaPredicted RBP11.75□□□□□ -0.53
ACTN1-216ENST00000556083 ABCB5Q2M3G0 1257 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 KRBA2Q6ZNG9 492 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms