RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 OSBPL3Q9H4L5 887 aa7.58□□□□□ -1.2
TMEM260-209ENST00000556079 KANSL2Q9H9L4 492 aa7.58□□□□□ -1.2
TMEM260-209ENST00000556079 CWC22Q9HCG8 908 aaKnown RBP7.58□□□□□ -1.2
TMEM260-209ENST00000556079 RAVER2Q9HCJ3 691 aaKnown RBP7.58□□□□□ -1.2
TMEM260-209ENST00000556079 TOMM22Q9NS69 142 aa7.58□□□□□ -1.2
TMEM260-209ENST00000556079 ISY1Q9ULR0 285 aaKnown RBP7.58□□□□□ -1.2
TMEM260-209ENST00000556079 FRMPD2Q68DX3 1309 aaPredicted RBP7.57□□□□□ -1.2
TMEM260-209ENST00000556079 VWA5AO00534 786 aa7.57□□□□□ -1.2
TMEM260-209ENST00000556079 ZKSCAN1P17029 563 aaPredicted RBP7.57□□□□□ -1.2
TMEM260-209ENST00000556079 SYN1P17600 705 aa7.57□□□□□ -1.2
TMEM260-209ENST00000556079 MCCP23508 829 aa7.57□□□□□ -1.2
TMEM260-209ENST00000556079 ADORA2AP29274 412 aa7.57□□□□□ -1.2
TMEM260-209ENST00000556079 MAPK4P31152 587 aa7.57□□□□□ -1.2
TMEM260-209ENST00000556079 SLC16A2P36021 539 aa7.57□□□□□ -1.2
TMEM260-209ENST00000556079 PTH1RQ03431 593 aa7.57□□□□□ -1.2
TMEM260-209ENST00000556079 MAP2K5Q13163 448 aa7.57□□□□□ -1.2
TMEM260-209ENST00000556079 GRB14Q14449 540 aa7.57□□□□□ -1.2
TMEM260-209ENST00000556079 MAP3K21Q5TCX8 1036 aa7.57□□□□□ -1.2
TMEM260-209ENST00000556079 SLFN13Q68D06 897 aa7.57□□□□□ -1.2
TMEM260-209ENST00000556079 TTBK2Q6IQ55 1244 aa7.57□□□□□ -1.2
TMEM260-209ENST00000556079 NECAB2Q7Z6G3 386 aa7.57□□□□□ -1.2
TMEM260-209ENST00000556079 CCAR1Q8IX12 1150 aaKnown RBP7.57□□□□□ -1.2
TMEM260-209ENST00000556079 ZNF444Q8N0Y2 327 aaPredicted RBP7.57□□□□□ -1.2
TMEM260-209ENST00000556079 CPXCR1Q8N123 301 aa7.57□□□□□ -1.2
TMEM260-209ENST00000556079 KIFC2Q96AC6 838 aa7.57□□□□□ -1.2
TMEM260-209ENST00000556079 APBA2Q99767 749 aa7.57□□□□□ -1.2
TMEM260-209ENST00000556079 GDF15Q99988 308 aa7.57□□□□□ -1.2
TMEM260-209ENST00000556079 NUDT12Q9BQG2 462 aa7.57□□□□□ -1.2
TMEM260-209ENST00000556079 SLF1Q9BQI6 1058 aa7.57□□□□□ -1.2
TMEM260-209ENST00000556079 NACAP1Q9BZK3 213 aa7.57□□□□□ -1.2
TMEM260-209ENST00000556079 GOPCQ9HD26 462 aa7.57□□□□□ -1.2
TMEM260-209ENST00000556079 HOMER2Q9NSB8 354 aa7.57□□□□□ -1.2
TMEM260-209ENST00000556079 DIAPH3Q9NSV4 1193 aa7.57□□□□□ -1.2
TMEM260-209ENST00000556079 RYDENQ9NUL5 291 aaKnown RBP7.57□□□□□ -1.2
TMEM260-209ENST00000556079 NYAP2Q9P242 653 aa7.57□□□□□ -1.2
TMEM260-209ENST00000556079 ZNF214Q9UL59 606 aaPredicted RBP7.57□□□□□ -1.2
TMEM260-209ENST00000556079 PPP1R9AQ9ULJ8 1098 aa7.57□□□□□ -1.2
TMEM260-209ENST00000556079 BAZ2BQ9UIF8 2168 aaKnown RBP7.56□□□□□ -1.2
TMEM260-209ENST00000556079 LRRC37A2A6NM11 1700 aa7.56□□□□□ -1.2
TMEM260-209ENST00000556079 A0A1W2PPC1 479 aa7.56□□□□□ -1.2
TMEM260-209ENST00000556079 SLC15A5A6NIM6 579 aa7.56□□□□□ -1.2
TMEM260-209ENST00000556079 TSPY2A6NKD2 308 aa7.56□□□□□ -1.2
TMEM260-209ENST00000556079 RGS2P41220 211 aa7.56□□□□□ -1.2
TMEM260-209ENST00000556079 ALX1Q15699 326 aa7.56□□□□□ -1.2
TMEM260-209ENST00000556079 RCSD1Q6JBY9 416 aa7.56□□□□□ -1.2
TMEM260-209ENST00000556079 CCDC174Q6PII3 467 aa7.56□□□□□ -1.2
TMEM260-209ENST00000556079 LPAR1Q92633 364 aa7.56□□□□□ -1.2
TMEM260-209ENST00000556079 FGD4Q96M96 766 aa7.56□□□□□ -1.2
TMEM260-209ENST00000556079 PURBQ96QR8 312 aaKnown RBP7.56□□□□□ -1.2
TMEM260-209ENST00000556079 SH2D4AQ9H788 454 aa7.56□□□□□ -1.2
TMEM260-209ENST00000556079 SENP2Q9HC62 589 aa7.56□□□□□ -1.2
TMEM260-209ENST00000556079 ANAPC4Q9UJX5 808 aa7.56□□□□□ -1.2
TMEM260-209ENST00000556079 ADAMTS5Q9UNA0 930 aa7.56□□□□□ -1.2
TMEM260-209ENST00000556079 STX8Q9UNK0 236 aa7.56□□□□□ -1.2
TMEM260-209ENST00000556079 MUC3AQ02505 3323 aa7.56□□□□□ -1.2
TMEM260-209ENST00000556079 B4E1Z4 1266 aa7.55□□□□□ -1.2
TMEM260-209ENST00000556079 TMEM232C9JQI7 657 aa7.55□□□□□ -1.2
TMEM260-209ENST00000556079 ORC4O43929 436 aa7.55□□□□□ -1.2
TMEM260-209ENST00000556079 TTLL1O95922 423 aa7.55□□□□□ -1.2
TMEM260-209ENST00000556079 IGHA2P01877 340 aa7.55□□□□□ -1.2
TMEM260-209ENST00000556079 NUDT7P0C024 238 aa7.55□□□□□ -1.2
TMEM260-209ENST00000556079 GOLGA8HP0CJ92 632 aa7.55□□□□□ -1.2
TMEM260-209ENST00000556079 CHMLP26374 656 aa7.55□□□□□ -1.2
TMEM260-209ENST00000556079 MAGEA10P43363 369 aaPredicted RBP7.55□□□□□ -1.2
TMEM260-209ENST00000556079 PDE4BQ07343 736 aa7.55□□□□□ -1.2
TMEM260-209ENST00000556079 AAMPQ13685 434 aa7.55□□□□□ -1.2
TMEM260-209ENST00000556079 CCDC96Q2M329 555 aa7.55□□□□□ -1.2
TMEM260-209ENST00000556079 LRRFIP1Q32MZ4 808 aaKnown RBP7.55□□□□□ -1.2
TMEM260-209ENST00000556079 SNRNP48Q6IEG0 339 aaKnown RBP7.55□□□□□ -1.2
TMEM260-209ENST00000556079 DEFB123Q8N688 67 aa7.55□□□□□ -1.2
TMEM260-209ENST00000556079 SOCS4Q8WXH5 440 aa7.55□□□□□ -1.2
TMEM260-209ENST00000556079 AGBL1Q96MI9 1066 aa7.55□□□□□ -1.2
TMEM260-209ENST00000556079 TMEM47Q9BQJ4 181 aa7.55□□□□□ -1.2
TMEM260-209ENST00000556079 KRTAP3-3Q9BYR6 98 aa7.55□□□□□ -1.2
TMEM260-209ENST00000556079 KRTAP3-2Q9BYR7 98 aa7.55□□□□□ -1.2
TMEM260-209ENST00000556079 GPCPD1Q9NPB8 672 aa7.55□□□□□ -1.2
TMEM260-209ENST00000556079 HOXC10Q9NYD6 342 aa7.55□□□□□ -1.2
TMEM260-209ENST00000556079 PFASO15067 1338 aa7.54□□□□□ -1.2
TMEM260-209ENST00000556079 ZNF536O15090 1300 aa7.54□□□□□ -1.2
TMEM260-209ENST00000556079 RPTORQ8N122 1335 aa7.54□□□□□ -1.2
TMEM260-209ENST00000556079 ADCY6O43306 1168 aa7.54□□□□□ -1.2
TMEM260-209ENST00000556079 KDM4AO75164 1064 aa7.54□□□□□ -1.2
TMEM260-209ENST00000556079 FGRP09769 529 aa7.54□□□□□ -1.2
TMEM260-209ENST00000556079 BMP3P12645 472 aa7.54□□□□□ -1.2
TMEM260-209ENST00000556079 CYBAP13498 195 aa7.54□□□□□ -1.2
TMEM260-209ENST00000556079 CNGA1P29973 690 aa7.54□□□□□ -1.2
TMEM260-209ENST00000556079 BMP8BP34820 402 aa7.54□□□□□ -1.2
TMEM260-209ENST00000556079 STAT3P40763 770 aa7.54□□□□□ -1.2
TMEM260-209ENST00000556079 CCNA1P78396 465 aa7.54□□□□□ -1.2
TMEM260-209ENST00000556079 CNTN2Q02246 1040 aa7.54□□□□□ -1.2
TMEM260-209ENST00000556079 MUM1L1Q5H9M0 696 aa7.54□□□□□ -1.2
TMEM260-209ENST00000556079 AKNAD1Q5T1N1 836 aa7.54□□□□□ -1.2
TMEM260-209ENST00000556079 STOX1Q6ZVD7 989 aa7.54□□□□□ -1.2
TMEM260-209ENST00000556079 CYB5R4Q7L1T6 521 aa7.54□□□□□ -1.2
TMEM260-209ENST00000556079 RIOX2Q8IUF8 465 aa7.54□□□□□ -1.2
TMEM260-209ENST00000556079 GMCL1P1Q8NEA9 526 aa7.54□□□□□ -1.2
TMEM260-209ENST00000556079 GTF3C2Q8WUA4 911 aaPredicted RBP7.54□□□□□ -1.2
TMEM260-209ENST00000556079 MKL1Q969V6 931 aa7.54□□□□□ -1.2
TMEM260-209ENST00000556079 MAML3Q96JK9 1138 aa7.54□□□□□ -1.2
TMEM260-209ENST00000556079 MMP19Q99542 508 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms