RNA–Protein interactions for RNA: ENST00000556054.5

APEX1-212, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-212ENST00000556054 OSBPP22059 807 aa13.84□□□□□ -0.19
APEX1-212ENST00000556054 TRIM29Q14134 588 aa13.84□□□□□ -0.19
APEX1-212ENST00000556054 CDC37Q16543 378 aaPredicted RBP13.84□□□□□ -0.19
APEX1-212ENST00000556054 CCL15Q16663 113 aa13.84□□□□□ -0.19
APEX1-212ENST00000556054 QRICH1Q2TAL8 776 aa13.84□□□□□ -0.19
APEX1-212ENST00000556054 TREML2Q5T2D2 321 aa13.84□□□□□ -0.19
APEX1-212ENST00000556054 CCDC148Q8NFR7 591 aa13.84□□□□□ -0.19
APEX1-212ENST00000556054 BRI3BPQ8WY22 251 aa13.84□□□□□ -0.19
APEX1-212ENST00000556054 AMNQ9BXJ7 453 aa13.84□□□□□ -0.19
APEX1-212ENST00000556054 CPVLQ9H3G5 476 aa13.84□□□□□ -0.19
APEX1-212ENST00000556054 VAT1LQ9HCJ6 419 aa13.84□□□□□ -0.19
APEX1-212ENST00000556054 FBXO28Q9NVF7 368 aa13.84□□□□□ -0.19
APEX1-212ENST00000556054 ISY1Q9ULR0 285 aaKnown RBP13.84□□□□□ -0.19
APEX1-212ENST00000556054 ABT1Q9ULW3 272 aaKnown RBP13.84□□□□□ -0.19
APEX1-212ENST00000556054 WDR33Q9C0J8 1336 aaKnown RBP13.84□□□□□ -0.19
APEX1-212ENST00000556054 A0A0G2JMZ2 1700 aa13.84□□□□□ -0.19
APEX1-212ENST00000556054 VWA5AO00534 786 aa13.83□□□□□ -0.2
APEX1-212ENST00000556054 CALML3P27482 149 aa13.83□□□□□ -0.2
APEX1-212ENST00000556054 DGKZQ13574 1117 aa13.83□□□□□ -0.2
APEX1-212ENST00000556054 FBXO11Q86XK2 927 aa13.83□□□□□ -0.2
APEX1-212ENST00000556054 SAMD3Q8N6K7 520 aa13.83□□□□□ -0.2
APEX1-212ENST00000556054 REPS2Q8NFH8 660 aa13.83□□□□□ -0.2
APEX1-212ENST00000556054 KIFC2Q96AC6 838 aa13.83□□□□□ -0.2
APEX1-212ENST00000556054 COL11A1P12107 1806 aaPredicted RBP13.83□□□□□ -0.2
APEX1-212ENST00000556054 SPDYE16A6NNV3 312 aaPredicted RBP13.82□□□□□ -0.2
APEX1-212ENST00000556054 STXBP3O00186 592 aa13.82□□□□□ -0.2
APEX1-212ENST00000556054 BRD1O95696 1058 aa13.82□□□□□ -0.2
APEX1-212ENST00000556054 ICAM1P05362 532 aa13.82□□□□□ -0.2
APEX1-212ENST00000556054 TM4SF4P48230 202 aa13.82□□□□□ -0.2
APEX1-212ENST00000556054 IRX3P78415 501 aaPredicted RBP13.82□□□□□ -0.2
APEX1-212ENST00000556054 DEFB115Q30KQ5 88 aa13.82□□□□□ -0.2
APEX1-212ENST00000556054 KRT40Q6A162 431 aa13.82□□□□□ -0.2
APEX1-212ENST00000556054 WWC2Q6AWC2 1192 aa13.82□□□□□ -0.2
APEX1-212ENST00000556054 MCTP2Q6DN12 878 aa13.82□□□□□ -0.2
APEX1-212ENST00000556054 HOMER1Q86YM7 354 aa13.82□□□□□ -0.2
APEX1-212ENST00000556054 DAGLBQ8NCG7 672 aa13.82□□□□□ -0.2
APEX1-212ENST00000556054 PHF20Q9BVI0 1012 aa13.82□□□□□ -0.2
APEX1-212ENST00000556054 ZMYND12Q9H0C1 365 aa13.82□□□□□ -0.2
APEX1-212ENST00000556054 ASCC2Q9H1I8 757 aaPredicted RBP13.82□□□□□ -0.2
APEX1-212ENST00000556054 MTMR6Q9Y217 621 aa13.82□□□□□ -0.2
APEX1-212ENST00000556054 BTBD19C9JJ37 291 aa13.81□□□□□ -0.2
APEX1-212ENST00000556054 H3BQV1 296 aa13.81□□□□□ -0.2
APEX1-212ENST00000556054 PPP1R11O60927 126 aaPredicted RBP13.81□□□□□ -0.2
APEX1-212ENST00000556054 MMP1P03956 469 aa13.81□□□□□ -0.2
APEX1-212ENST00000556054 GNA11P29992 359 aa13.81□□□□□ -0.2
APEX1-212ENST00000556054 HERVK_113P62684 666 aa13.81□□□□□ -0.2
APEX1-212ENST00000556054 GHRHRQ02643 423 aa13.81□□□□□ -0.2
APEX1-212ENST00000556054 SREBF2Q12772 1141 aa13.81□□□□□ -0.2
APEX1-212ENST00000556054 NOGQ13253 232 aa13.81□□□□□ -0.2
APEX1-212ENST00000556054 SAFBQ15424 915 aaKnown RBP eCLIP13.81□□□□□ -0.2
APEX1-212ENST00000556054 TKFCQ3LXA3 575 aa13.81□□□□□ -0.2
APEX1-212ENST00000556054 OTUD7BQ6GQQ9 843 aa13.81□□□□□ -0.2
APEX1-212ENST00000556054 BICD2Q8TD16 824 aa13.81□□□□□ -0.2
APEX1-212ENST00000556054 ATG4CQ96DT6 458 aa13.81□□□□□ -0.2
APEX1-212ENST00000556054 AIFM3Q96NN9 605 aa13.81□□□□□ -0.2
APEX1-212ENST00000556054 P2RX7Q99572 595 aaKnown RBP13.81□□□□□ -0.2
APEX1-212ENST00000556054 FOXP1Q9H334 677 aaPredicted RBP13.81□□□□□ -0.2
APEX1-212ENST00000556054 ZSCAN16Q9H4T2 348 aaPredicted RBP13.81□□□□□ -0.2
APEX1-212ENST00000556054 MAP3K20Q9NYL2 800 aaKnown RBP13.81□□□□□ -0.2
APEX1-212ENST00000556054 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.81□□□□□ -0.2
APEX1-212ENST00000556054 PCDHA1Q9Y5I3 950 aa13.81□□□□□ -0.2
APEX1-212ENST00000556054 ZNF536O15090 1300 aa13.81□□□□□ -0.2
APEX1-212ENST00000556054 ABCB11O95342 1321 aa13.81□□□□□ -0.2
APEX1-212ENST00000556054 SMCHD1A6NHR9 2005 aa13.81□□□□□ -0.2
APEX1-212ENST00000556054 hCG_1642624A0A1W2PR95 340 aa13.8□□□□□ -0.2
APEX1-212ENST00000556054 PDHXO00330 501 aa13.8□□□□□ -0.2
APEX1-212ENST00000556054 PPFIA3O75145 1194 aa13.8□□□□□ -0.2
APEX1-212ENST00000556054 ZSCAN22P10073 491 aaPredicted RBP13.8□□□□□ -0.2
APEX1-212ENST00000556054 U2AF2P26368 475 aaKnown RBP eCLIP13.8□□□□□ -0.26e-9■□□□□ 10.7
APEX1-212ENST00000556054 COPB2P35606 906 aa13.8□□□□□ -0.2
APEX1-212ENST00000556054 GCLCP48506 637 aaPredicted RBP13.8□□□□□ -0.2
APEX1-212ENST00000556054 HEATR3Q7Z4Q2 680 aa13.8□□□□□ -0.2
APEX1-212ENST00000556054 PTPN18Q99952 460 aa13.8□□□□□ -0.2
APEX1-212ENST00000556054 BRMS1Q9HCU9 246 aa13.8□□□□□ -0.2
APEX1-212ENST00000556054 C6orf50Q9HD87 102 aa13.8□□□□□ -0.2
APEX1-212ENST00000556054 VPS54Q9P1Q0 977 aa13.8□□□□□ -0.2
APEX1-212ENST00000556054 ZNF214Q9UL59 606 aaPredicted RBP13.8□□□□□ -0.2
APEX1-212ENST00000556054 MRPL11Q9Y3B7 192 aaKnown RBP13.8□□□□□ -0.2
APEX1-212ENST00000556054 RABGAP1Q9Y3P9 1069 aa13.8□□□□□ -0.2
APEX1-212ENST00000556054 CTDP1Q9Y5B0 961 aaPredicted RBP13.8□□□□□ -0.2
APEX1-212ENST00000556054 PIK3CDO00329 1044 aa13.79□□□□□ -0.2
APEX1-212ENST00000556054 MRPL12P52815 198 aaKnown RBP13.79□□□□□ -0.2
APEX1-212ENST00000556054 NAPAP54920 295 aa13.79□□□□□ -0.2
APEX1-212ENST00000556054 NLRP5P59047 1200 aa13.79□□□□□ -0.2
APEX1-212ENST00000556054 NPY5RQ15761 445 aa13.79□□□□□ -0.2
APEX1-212ENST00000556054 TYW1BQ6NUM6 668 aa13.79□□□□□ -0.2
APEX1-212ENST00000556054 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.79□□□□□ -0.2
APEX1-212ENST00000556054 BRAPQ7Z569 592 aa13.79□□□□□ -0.2
APEX1-212ENST00000556054 PIBF1Q8WXW3 757 aa13.79□□□□□ -0.2
APEX1-212ENST00000556054 GPKOWQ92917 476 aaPredicted RBP eCLIP13.79□□□□□ -0.29e-8■■■□□ 15.2
APEX1-212ENST00000556054 SHISA4Q96DD7 197 aa13.79□□□□□ -0.2
APEX1-212ENST00000556054 PARK7Q99497 189 aaKnown RBP13.79□□□□□ -0.2
APEX1-212ENST00000556054 TEX13BQ9BXU2 312 aa13.79□□□□□ -0.2
APEX1-212ENST00000556054 RIC8AQ9NPQ8 531 aa13.79□□□□□ -0.2
APEX1-212ENST00000556054 PCDHA4Q9UN74 947 aa13.79□□□□□ -0.2
APEX1-212ENST00000556054 ZDHHC9Q9Y397 364 aa13.79□□□□□ -0.2
APEX1-212ENST00000556054 VPS37CA5D8V6 355 aaPredicted RBP13.78□□□□□ -0.2
APEX1-212ENST00000556054 SMCO2A6NFE2 343 aa13.78□□□□□ -0.2
APEX1-212ENST00000556054 M0R2N6 131 aa13.78□□□□□ -0.2
APEX1-212ENST00000556054 DTNBO60941 627 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms