RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 KANSL2Q9H9L4 492 aa12.94□□□□□ -0.34
TDP1-212ENST00000555565 FBXO28Q9NVF7 368 aa12.94□□□□□ -0.34
TDP1-212ENST00000555565 DNAJC25-GNG10A0A024R161 153 aa12.93□□□□□ -0.34
TDP1-212ENST00000555565 ARVCFO00192 962 aa12.93□□□□□ -0.34
TDP1-212ENST00000555565 VWA5AO00534 786 aa12.93□□□□□ -0.34
TDP1-212ENST00000555565 WDR46O15213 610 aaKnown RBP12.93□□□□□ -0.34
TDP1-212ENST00000555565 GPAA1O43292 621 aa12.93□□□□□ -0.34
TDP1-212ENST00000555565 DUSP11O75319 330 aaKnown RBP12.93□□□□□ -0.34
TDP1-212ENST00000555565 ASGR1P07306 291 aa12.93□□□□□ -0.34
TDP1-212ENST00000555565 ZFYP08048 801 aaPredicted RBP12.93□□□□□ -0.34
TDP1-212ENST00000555565 CYP2C18P33260 490 aa12.93□□□□□ -0.34
TDP1-212ENST00000555565 STAT3P40763 770 aa12.93□□□□□ -0.34
TDP1-212ENST00000555565 RRP1P56182 461 aaKnown RBP12.93□□□□□ -0.34
TDP1-212ENST00000555565 KCTD2Q14681 263 aa12.93□□□□□ -0.34
TDP1-212ENST00000555565 GIMAP6Q6P9H5 292 aa12.93□□□□□ -0.34
TDP1-212ENST00000555565 CCDC174Q6PII3 467 aa12.93□□□□□ -0.34
TDP1-212ENST00000555565 MSL3Q8N5Y2 521 aaKnown RBP12.93□□□□□ -0.34
TDP1-212ENST00000555565 PI4K2BQ8TCG2 481 aa12.93□□□□□ -0.34
TDP1-212ENST00000555565 PPP1R12CQ9BZL4 782 aa12.93□□□□□ -0.34
TDP1-212ENST00000555565 SLC28A3Q9HAS3 691 aa12.93□□□□□ -0.34
TDP1-212ENST00000555565 EPB41L4AQ9HCS5 686 aaPredicted RBP12.93□□□□□ -0.34
TDP1-212ENST00000555565 IL23AQ9NPF7 189 aa12.93□□□□□ -0.34
TDP1-212ENST00000555565 C11orf16Q9NQ32 467 aa12.93□□□□□ -0.34
TDP1-212ENST00000555565 MSRAQ9UJ68 235 aa12.93□□□□□ -0.34
TDP1-212ENST00000555565 FAM184BQ9ULE4 1060 aa12.93□□□□□ -0.34
TDP1-212ENST00000555565 GREB1LQ9C091 1923 aaPredicted RBP12.93□□□□□ -0.34
TDP1-212ENST00000555565 MROH7Q68CQ1 1323 aa12.92□□□□□ -0.34
TDP1-212ENST00000555565 TTC41PQ6P2S7 1318 aa12.92□□□□□ -0.34
TDP1-212ENST00000555565 M0R2C6 588 aa12.92□□□□□ -0.34
TDP1-212ENST00000555565 ERC2O15083 957 aa12.92□□□□□ -0.34
TDP1-212ENST00000555565 MYOGP15173 224 aa12.92□□□□□ -0.34
TDP1-212ENST00000555565 POU3F3P20264 500 aaPredicted RBP12.92□□□□□ -0.34
TDP1-212ENST00000555565 RASA1P20936 1047 aa12.92□□□□□ -0.34
TDP1-212ENST00000555565 NKX3-2P78367 333 aa12.92□□□□□ -0.34
TDP1-212ENST00000555565 SLC43A3Q8NBI5 491 aa12.92□□□□□ -0.34
TDP1-212ENST00000555565 KHSRPQ92945 711 aaKnown RBP eCLIP12.92□□□□□ -0.34
TDP1-212ENST00000555565 GLT1D1Q96MS3 346 aa12.92□□□□□ -0.34
TDP1-212ENST00000555565 UPF3AQ9H1J1 476 aaKnown RBP12.92□□□□□ -0.34
TDP1-212ENST00000555565 CNPY2Q9Y2B0 182 aa12.92□□□□□ -0.34
TDP1-212ENST00000555565 RIPK3Q9Y572 518 aa12.92□□□□□ -0.34
TDP1-212ENST00000555565 UMODL1Q5DID0 1318 aa12.91□□□□□ -0.34
TDP1-212ENST00000555565 COL11A1P12107 1806 aaPredicted RBP12.91□□□□□ -0.34
TDP1-212ENST00000555565 MINDY4BA8MYZ0 360 aa12.91□□□□□ -0.34
TDP1-212ENST00000555565 TLL1O43897 1013 aa12.91□□□□□ -0.34
TDP1-212ENST00000555565 FGBP02675 491 aa12.91□□□□□ -0.34
TDP1-212ENST00000555565 RABGGTBP53611 331 aa12.91□□□□□ -0.34
TDP1-212ENST00000555565 GJA9P57773 515 aa12.91□□□□□ -0.34
TDP1-212ENST00000555565 SAMD1Q6SPF0 538 aaPredicted RBP12.91□□□□□ -0.34
TDP1-212ENST00000555565 STK11IPQ8N1F8 1099 aa12.91□□□□□ -0.34
TDP1-212ENST00000555565 IL27Q8NEV9 243 aa12.91□□□□□ -0.34
TDP1-212ENST00000555565 FGD4Q96M96 766 aa12.91□□□□□ -0.34
TDP1-212ENST00000555565 KATNBL1Q9H079 304 aa12.91□□□□□ -0.34
TDP1-212ENST00000555565 PPP1R9AQ9ULJ8 1098 aa12.91□□□□□ -0.34
TDP1-212ENST00000555565 TRANK1O15050 2925 aa12.91□□□□□ -0.34
TDP1-212ENST00000555565 A0A0U1RQG5 324 aaPredicted RBP12.9□□□□□ -0.34
TDP1-212ENST00000555565 C6orf222P0C671 652 aaPredicted RBP12.9□□□□□ -0.34
TDP1-212ENST00000555565 GNAT2P19087 354 aa12.9□□□□□ -0.34
TDP1-212ENST00000555565 TDO2P48775 406 aa12.9□□□□□ -0.34
TDP1-212ENST00000555565 ACVR2BQ13705 512 aa12.9□□□□□ -0.34
TDP1-212ENST00000555565 OTOP2Q7RTS6 562 aa12.9□□□□□ -0.34
TDP1-212ENST00000555565 PCSK9Q8NBP7 692 aaKnown RBP12.9□□□□□ -0.34
TDP1-212ENST00000555565 CRBNQ96SW2 442 aa12.9□□□□□ -0.34
TDP1-212ENST00000555565 SEC62Q99442 399 aaKnown RBP12.9□□□□□ -0.34
TDP1-212ENST00000555565 MKNK2Q9HBH9 465 aa12.9□□□□□ -0.34
TDP1-212ENST00000555565 GOPCQ9HD26 462 aa12.9□□□□□ -0.34
TDP1-212ENST00000555565 MTCH2Q9Y6C9 303 aa12.9□□□□□ -0.34
TDP1-212ENST00000555565 GRIN2DO15399 1336 aa12.89□□□□□ -0.35
TDP1-212ENST00000555565 SALL3Q9BXA9 1300 aa12.89□□□□□ -0.35
TDP1-212ENST00000555565 GBF1Q92538 1859 aa12.89□□□□□ -0.35
TDP1-212ENST00000555565 PIEZO1Q92508 2521 aa12.89□□□□□ -0.35
TDP1-212ENST00000555565 PATL2C9JE40 543 aaKnown RBP12.89□□□□□ -0.35
TDP1-212ENST00000555565 RFXAPO00287 272 aa12.89□□□□□ -0.35
TDP1-212ENST00000555565 APPP05067 770 aa12.89□□□□□ -0.35
TDP1-212ENST00000555565 MX1P20591 662 aa12.89□□□□□ -0.35
TDP1-212ENST00000555565 LRRFIP1Q32MZ4 808 aaKnown RBP12.89□□□□□ -0.35
TDP1-212ENST00000555565 CCDC144BQ3MJ40 725 aa12.89□□□□□ -0.35
TDP1-212ENST00000555565 GNASQ5JWF2 1037 aa12.89□□□□□ -0.35
TDP1-212ENST00000555565 FAM83BQ5T0W9 1011 aa12.89□□□□□ -0.35
TDP1-212ENST00000555565 ZNF467Q7Z7K2 595 aaPredicted RBP12.89□□□□□ -0.35
TDP1-212ENST00000555565 IFNL3Q8IZI9 196 aa12.89□□□□□ -0.35
TDP1-212ENST00000555565 TSPYL2Q9H2G4 693 aaPredicted RBP12.89□□□□□ -0.35
TDP1-212ENST00000555565 NYAP2Q9P242 653 aa12.89□□□□□ -0.35
TDP1-212ENST00000555565 ZHX1Q9UKY1 873 aaPredicted RBP12.89□□□□□ -0.35
TDP1-212ENST00000555565 MYH4Q9Y623 1939 aa12.88□□□□□ -0.35
TDP1-212ENST00000555565 PRRC2BQ5JSZ5 2229 aaKnown RBP12.88□□□□□ -0.35
TDP1-212ENST00000555565 IGKV6D-41A0A0C4DH26 115 aa12.88□□□□□ -0.35
TDP1-212ENST00000555565 RAD21O60216 631 aa12.88□□□□□ -0.35
TDP1-212ENST00000555565 GPR37L1O60883 481 aa12.88□□□□□ -0.35
TDP1-212ENST00000555565 PRDM1O75626 825 aa12.88□□□□□ -0.35
TDP1-212ENST00000555565 COPB2P35606 906 aa12.88□□□□□ -0.35
TDP1-212ENST00000555565 AAK1Q2M2I8 961 aa12.88□□□□□ -0.35
TDP1-212ENST00000555565 TMEM31Q5JXX7 168 aa12.88□□□□□ -0.35
TDP1-212ENST00000555565 ZMYM1Q5SVZ6 1142 aa12.88□□□□□ -0.35
TDP1-212ENST00000555565 MICALL1Q8N3F8 863 aa12.88□□□□□ -0.35
TDP1-212ENST00000555565 VTI1AQ96AJ9 217 aa12.88□□□□□ -0.35
TDP1-212ENST00000555565 NUP88Q99567 741 aaPredicted RBP12.88□□□□□ -0.35
TDP1-212ENST00000555565 FSD1Q9BTV5 496 aa12.88□□□□□ -0.35
TDP1-212ENST00000555565 WNT8AQ9H1J5 351 aa12.88□□□□□ -0.35
TDP1-212ENST00000555565 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.88□□□□□ -0.35
TDP1-212ENST00000555565 HCN4Q9Y3Q4 1203 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms