RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 NEDD4P46934 1319 aa28.79■■■□□ 2.2
PRKCH-216ENST00000555542 DNAJC25-GNG10A0A024R161 153 aa28.79■■■□□ 2.2
PRKCH-216ENST00000555542 ALAS1P13196 640 aa28.79■■■□□ 2.2
PRKCH-216ENST00000555542 TAL1P17542 331 aaPredicted RBP28.79■■■□□ 2.2
PRKCH-216ENST00000555542 XPNPEP3Q9NQH7 507 aa28.79■■■□□ 2.2
PRKCH-216ENST00000555542 ZHX1Q9UKY1 873 aaPredicted RBP28.79■■■□□ 2.2
PRKCH-216ENST00000555542 FRMPD2Q68DX3 1309 aaPredicted RBP28.78■■■□□ 2.2
PRKCH-216ENST00000555542 SYNGAP1Q96PV0 1343 aa28.78■■■□□ 2.2
PRKCH-216ENST00000555542 AKR1A1P14550 325 aa28.78■■■□□ 2.2
PRKCH-216ENST00000555542 IMMTQ16891 758 aaKnown RBP28.78■■■□□ 2.2
PRKCH-216ENST00000555542 TKFCQ3LXA3 575 aa28.78■■■□□ 2.2
PRKCH-216ENST00000555542 DSCC1Q9BVC3 393 aa28.78■■■□□ 2.2
PRKCH-216ENST00000555542 CTNNA3Q9UI47 895 aa28.78■■■□□ 2.2
PRKCH-216ENST00000555542 ZNF536O15090 1300 aa28.77■■■□□ 2.2
PRKCH-216ENST00000555542 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.77■■■□□ 2.2
PRKCH-216ENST00000555542 ZNF467Q7Z7K2 595 aaPredicted RBP28.77■■■□□ 2.2
PRKCH-216ENST00000555542 TTC14Q96N46 770 aa28.77■■■□□ 2.2
PRKCH-216ENST00000555542 TRERF1Q96PN7 1200 aa28.77■■■□□ 2.2
PRKCH-216ENST00000555542 ZKSCAN3Q9BRR0 538 aa28.77■■■□□ 2.2
PRKCH-216ENST00000555542 GPCPD1Q9NPB8 672 aa28.77■■■□□ 2.2
PRKCH-216ENST00000555542 CCPG1Q9ULG6 757 aa28.77■■■□□ 2.2
PRKCH-216ENST00000555542 SMCHD1A6NHR9 2005 aa28.76■■■□□ 2.19
PRKCH-216ENST00000555542 ZNF865P0CJ78 1059 aaPredicted RBP28.76■■■□□ 2.19
PRKCH-216ENST00000555542 GSPT1P15170 499 aaKnown RBP28.76■■■□□ 2.19
PRKCH-216ENST00000555542 SLC16A2P36021 539 aa28.76■■■□□ 2.19
PRKCH-216ENST00000555542 LRRC41Q15345 812 aa28.76■■■□□ 2.19
PRKCH-216ENST00000555542 TTBK2Q6IQ55 1244 aa28.76■■■□□ 2.19
PRKCH-216ENST00000555542 IQCA1Q86XH1 822 aa28.76■■■□□ 2.19
PRKCH-216ENST00000555542 POTEB2H3BUK9 544 aa28.75■■■□□ 2.19
PRKCH-216ENST00000555542 SYDE2Q5VT97 1194 aa28.75■■■□□ 2.19
PRKCH-216ENST00000555542 MAMDC4Q6UXC1 1216 aa28.75■■■□□ 2.19
PRKCH-216ENST00000555542 RNF180Q86T96 592 aa28.75■■■□□ 2.19
PRKCH-216ENST00000555542 PRO3102Q9H379 93 aa28.75■■■□□ 2.19
PRKCH-216ENST00000555542 KDM4AO75164 1064 aa28.74■■■□□ 2.19
PRKCH-216ENST00000555542 SNAI1O95863 264 aaPredicted RBP28.74■■■□□ 2.19
PRKCH-216ENST00000555542 PGK1P00558 417 aa28.74■■■□□ 2.19
PRKCH-216ENST00000555542 FERMT2Q96AC1 680 aa28.74■■■□□ 2.19
PRKCH-216ENST00000555542 A1CFQ9NQ94 594 aaKnown RBP28.74■■■□□ 2.19
PRKCH-216ENST00000555542 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.74■■■□□ 2.19
PRKCH-216ENST00000555542 FAM184BQ9ULE4 1060 aa28.74■■■□□ 2.19
PRKCH-216ENST00000555542 PDHBP11177 359 aa28.73■■■□□ 2.19
PRKCH-216ENST00000555542 ADCYAP1R1P41586 468 aa28.73■■■□□ 2.19
PRKCH-216ENST00000555542 MAGEA10P43363 369 aaPredicted RBP28.73■■■□□ 2.19
PRKCH-216ENST00000555542 NT5C2P49902 561 aa28.73■■■□□ 2.19
PRKCH-216ENST00000555542 RTP1P59025 263 aa28.73■■■□□ 2.19
PRKCH-216ENST00000555542 CCDC178Q5BJE1 867 aa28.73■■■□□ 2.19
PRKCH-216ENST00000555542 RUFY2Q8WXA3 655 aa28.73■■■□□ 2.19
PRKCH-216ENST00000555542 LENG1Q96BZ8 264 aaPredicted RBP28.73■■■□□ 2.19
PRKCH-216ENST00000555542 PRKAG2Q9UGJ0 569 aa28.73■■■□□ 2.19
PRKCH-216ENST00000555542 ATP11BQ9Y2G3 1177 aa28.73■■■□□ 2.19
PRKCH-216ENST00000555542 TRIOBPQ9H2D6 2365 aa28.73■■■□□ 2.19
PRKCH-216ENST00000555542 A0A1W2PPC1 479 aa28.72■■■□□ 2.19
PRKCH-216ENST00000555542 B4E1Z4 1266 aa28.72■■■□□ 2.19
PRKCH-216ENST00000555542 ICAM1P05362 532 aa28.72■■■□□ 2.19
PRKCH-216ENST00000555542 CNTN2Q02246 1040 aa28.72■■■□□ 2.19
PRKCH-216ENST00000555542 ARMCX2Q7L311 632 aa28.72■■■□□ 2.19
PRKCH-216ENST00000555542 GDF15Q99988 308 aa28.72■■■□□ 2.19
PRKCH-216ENST00000555542 RANBP17Q9H2T7 1088 aaKnown RBP28.72■■■□□ 2.19
PRKCH-216ENST00000555542 MCM3APO60318 1980 aa28.71■■■□□ 2.19
PRKCH-216ENST00000555542 RAD50Q92878 1312 aa28.71■■■□□ 2.19
PRKCH-216ENST00000555542 ACVR2BQ13705 512 aa28.71■■■□□ 2.19
PRKCH-216ENST00000555542 BTNL9Q6UXG8 535 aa28.71■■■□□ 2.19
PRKCH-216ENST00000555542 NSMFQ6X4W1 530 aa28.71■■■□□ 2.19
PRKCH-216ENST00000555542 SLC39A5Q6ZMH5 540 aa28.71■■■□□ 2.19
PRKCH-216ENST00000555542 ABHD16BQ9H3Z7 469 aa28.71■■■□□ 2.19
PRKCH-216ENST00000555542 ZNF543Q08ER8 600 aa28.7■■■□□ 2.18
PRKCH-216ENST00000555542 MUM1L1Q5H9M0 696 aa28.7■■■□□ 2.18
PRKCH-216ENST00000555542 DGKHQ86XP1 1220 aa28.7■■■□□ 2.18
PRKCH-216ENST00000555542 CCDC144CPQ8IYA2 1237 aa28.7■■■□□ 2.18
PRKCH-216ENST00000555542 FGD4Q96M96 766 aa28.7■■■□□ 2.18
PRKCH-216ENST00000555542 KRT23Q9C075 422 aa28.7■■■□□ 2.18
PRKCH-216ENST00000555542 KAT14Q9H8E8 782 aa28.7■■■□□ 2.18
PRKCH-216ENST00000555542 CNNM2Q9H8M5 875 aa28.7■■■□□ 2.18
PRKCH-216ENST00000555542 BMP8BP34820 402 aa28.69■■■□□ 2.18
PRKCH-216ENST00000555542 FAM133AQ8N9E0 248 aa28.69■■■□□ 2.18
PRKCH-216ENST00000555542 LBHD1Q9BQE6 289 aaPredicted RBP28.69■■■□□ 2.18
PRKCH-216ENST00000555542 UBE2OQ9C0C9 1292 aaKnown RBP28.69■■■□□ 2.18
PRKCH-216ENST00000555542 IL25Q9H293 177 aa28.69■■■□□ 2.18
PRKCH-216ENST00000555542 MDM2Q00987 491 aaPredicted RBP28.68■■■□□ 2.18
PRKCH-216ENST00000555542 PNMA1Q8ND90 353 aa28.68■■■□□ 2.18
PRKCH-216ENST00000555542 ZSCAN10Q96SZ4 725 aaPredicted RBP28.68■■■□□ 2.18
PRKCH-216ENST00000555542 UBAC1Q9BSL1 405 aa28.68■■■□□ 2.18
PRKCH-216ENST00000555542 PCDH10Q9P2E7 1040 aa28.68■■■□□ 2.18
PRKCH-216ENST00000555542 PHF24Q9UPV7 400 aa28.68■■■□□ 2.18
PRKCH-216ENST00000555542 SYNRGQ9UMZ2 1314 aa28.68■■■□□ 2.18
PRKCH-216ENST00000555542 ASB14A6NK59 587 aa28.67■■■□□ 2.18
PRKCH-216ENST00000555542 CCDC144BQ3MJ40 725 aa28.67■■■□□ 2.18
PRKCH-216ENST00000555542 TRIM60Q495X7 471 aa28.67■■■□□ 2.18
PRKCH-216ENST00000555542 GPATCH4Q5T3I0 446 aaKnown RBP28.67■■■□□ 2.18
PRKCH-216ENST00000555542 SPC25Q9HBM1 224 aa28.67■■■□□ 2.18
PRKCH-216ENST00000555542 PRDM5Q9NQX1 630 aaPredicted RBP28.67■■■□□ 2.18
PRKCH-216ENST00000555542 CYP39A1Q9NYL5 469 aa28.67■■■□□ 2.18
PRKCH-216ENST00000555542 ZSWIM5Q9P217 1185 aa28.67■■■□□ 2.18
PRKCH-216ENST00000555542 SOWAHBA6NEL2 793 aa28.66■■■□□ 2.18
PRKCH-216ENST00000555542 DUSP11O75319 330 aaKnown RBP28.66■■■□□ 2.18
PRKCH-216ENST00000555542 GOLGA8HP0CJ92 632 aa28.66■■■□□ 2.18
PRKCH-216ENST00000555542 SNHG28P0DPA3 235 aa28.66■■■□□ 2.18
PRKCH-216ENST00000555542 CHMLP26374 656 aa28.66■■■□□ 2.18
PRKCH-216ENST00000555542 PNMA2Q9UL42 364 aa28.66■■■□□ 2.18
PRKCH-216ENST00000555542 TNKSO95271 1327 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms