RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 FZD7O75084 574 aa6.39□□□□□ -1.39
SRP54-207ENST00000555535 FBLN1P23142 703 aa6.39□□□□□ -1.39
SRP54-207ENST00000555535 GNA15P30679 374 aa6.39□□□□□ -1.39
SRP54-207ENST00000555535 ACVRL1P37023 503 aa6.39□□□□□ -1.39
SRP54-207ENST00000555535 TMC3Q7Z5M5 1100 aa6.39□□□□□ -1.39
SRP54-207ENST00000555535 PLATP00750 562 aa6.38□□□□□ -1.39
SRP54-207ENST00000555535 NCAM1P13591 858 aa6.38□□□□□ -1.39
SRP54-207ENST00000555535 ZNF526Q8TF50 670 aaPredicted RBP6.38□□□□□ -1.39
SRP54-207ENST00000555535 ASB16Q96NS5 453 aa6.38□□□□□ -1.39
SRP54-207ENST00000555535 NOC4LQ9BVI4 516 aaKnown RBP6.38□□□□□ -1.39
SRP54-207ENST00000555535 IMPACTQ9P2X3 320 aa6.38□□□□□ -1.39
SRP54-207ENST00000555535 GTF3C3Q9Y5Q9 886 aa6.38□□□□□ -1.39
SRP54-207ENST00000555535 HTR3BO95264 441 aa6.37□□□□□ -1.39
SRP54-207ENST00000555535 PRAMEF1O95521 474 aa6.37□□□□□ -1.39
SRP54-207ENST00000555535 SLPIP03973 132 aa6.37□□□□□ -1.39
SRP54-207ENST00000555535 BMP8BP34820 402 aa6.37□□□□□ -1.39
SRP54-207ENST00000555535 GATAD2BQ8WXI9 593 aa6.37□□□□□ -1.39
SRP54-207ENST00000555535 CDADC1Q9BWV3 514 aa6.37□□□□□ -1.39
SRP54-207ENST00000555535 NTMQ9P121 344 aa6.37□□□□□ -1.39
SRP54-207ENST00000555535 GNEQ9Y223 722 aaKnown RBP6.37□□□□□ -1.39
SRP54-207ENST00000555535 A0A1W2PQJ5 194 aa6.36□□□□□ -1.39
SRP54-207ENST00000555535 FAM221AA4D161 298 aa6.36□□□□□ -1.39
SRP54-207ENST00000555535 NBPF12Q5TAG4 269 aaPredicted RBP6.36□□□□□ -1.39
SRP54-207ENST00000555535 CRIP3Q6Q6R5 217 aa6.36□□□□□ -1.39
SRP54-207ENST00000555535 KISS1RQ969F8 398 aaPredicted RBP6.36□□□□□ -1.39
SRP54-207ENST00000555535 PRDM14Q9GZV8 571 aa6.36□□□□□ -1.39
SRP54-207ENST00000555535 CHST7Q9NS84 486 aa6.36□□□□□ -1.39
SRP54-207ENST00000555535 ZNF205O95201 554 aa6.35□□□□□ -1.39
SRP54-207ENST00000555535 LDHBP07195 334 aaKnown RBP6.35□□□□□ -1.39
SRP54-207ENST00000555535 SARSP49591 514 aaKnown RBP6.35□□□□□ -1.39
SRP54-207ENST00000555535 DLX2Q07687 328 aaPredicted RBP6.35□□□□□ -1.39
SRP54-207ENST00000555535 CRB2Q5IJ48 1285 aa6.35□□□□□ -1.39
SRP54-207ENST00000555535 B3GNT8Q7Z7M8 397 aa6.35□□□□□ -1.39
SRP54-207ENST00000555535 PHC3Q8NDX5 983 aa6.35□□□□□ -1.39
SRP54-207ENST00000555535 AK5Q9Y6K8 562 aa6.35□□□□□ -1.39
SRP54-207ENST00000555535 DBHP09172 617 aa6.34□□□□□ -1.39
SRP54-207ENST00000555535 ATF2P15336 505 aa6.34□□□□□ -1.39
SRP54-207ENST00000555535 RAG1P15918 1043 aa6.34□□□□□ -1.39
SRP54-207ENST00000555535 LMNB2Q03252 620 aa6.34□□□□□ -1.39
SRP54-207ENST00000555535 HLA-DQA1Q5Y7H0 255 aa6.34□□□□□ -1.39
SRP54-207ENST00000555535 ZFPM1Q8IX07 1006 aa6.34□□□□□ -1.39
SRP54-207ENST00000555535 SH3RF3Q8TEJ3 882 aaPredicted RBP6.34□□□□□ -1.39
SRP54-207ENST00000555535 TLR6Q9Y2C9 796 aa6.34□□□□□ -1.39
SRP54-207ENST00000555535 TSC22D4Q9Y3Q8 395 aa6.34□□□□□ -1.39
SRP54-207ENST00000555535 MVKQ03426 396 aa6.33□□□□□ -1.4
SRP54-207ENST00000555535 KIAA2012Q0VF49 1180 aa6.33□□□□□ -1.4
SRP54-207ENST00000555535 BNC2Q6ZN30 1099 aaPredicted RBP6.33□□□□□ -1.4
SRP54-207ENST00000555535 TTLL7Q6ZT98 887 aa6.33□□□□□ -1.4
SRP54-207ENST00000555535 JAMLQ86YT9 394 aa6.33□□□□□ -1.4
SRP54-207ENST00000555535 JMJD8Q96S16 334 aa6.33□□□□□ -1.4
SRP54-207ENST00000555535 CDK5RAP1Q96SZ6 601 aaKnown RBP6.33□□□□□ -1.4
SRP54-207ENST00000555535 ANTXR1Q9H6X2 564 aa6.33□□□□□ -1.4
SRP54-207ENST00000555535 PRR13Q9NZ81 148 aa6.33□□□□□ -1.4
SRP54-207ENST00000555535 UBOX5O94941 541 aa6.32□□□□□ -1.4
SRP54-207ENST00000555535 ST13P50502 369 aaKnown RBP6.32□□□□□ -1.4
SRP54-207ENST00000555535 SNW1Q13573 536 aaKnown RBP6.32□□□□□ -1.4
SRP54-207ENST00000555535 TBC1D10BQ4KMP7 808 aaPredicted RBP6.32□□□□□ -1.4
SRP54-207ENST00000555535 ZNF761Q86XN6 746 aaPredicted RBP6.32□□□□□ -1.4
SRP54-207ENST00000555535 Q8N1X5 172 aa6.32□□□□□ -1.4
SRP54-207ENST00000555535 PDLIM7Q9NR12 457 aa6.32□□□□□ -1.4
SRP54-207ENST00000555535 DBR1Q9UK59 544 aaKnown RBP6.32□□□□□ -1.4
SRP54-207ENST00000555535 VAV1P15498 845 aa6.31□□□□□ -1.4
SRP54-207ENST00000555535 CCNFP41002 786 aa6.31□□□□□ -1.4
SRP54-207ENST00000555535 CORO7P57737 925 aa6.31□□□□□ -1.4
SRP54-207ENST00000555535 PRR5P85299 388 aa6.31□□□□□ -1.4
SRP54-207ENST00000555535 CAMK2GQ13555 558 aaPredicted RBP6.31□□□□□ -1.4
SRP54-207ENST00000555535 BICRALQ6AI39 1079 aa6.31□□□□□ -1.4
SRP54-207ENST00000555535 BORAQ6PGQ7 559 aa6.31□□□□□ -1.4
SRP54-207ENST00000555535 GLB1LQ6UWU2 654 aa6.31□□□□□ -1.4
SRP54-207ENST00000555535 FAM124AQ86V42 546 aa6.31□□□□□ -1.4
SRP54-207ENST00000555535 LGI4Q8N135 537 aa6.31□□□□□ -1.4
SRP54-207ENST00000555535 NAT16Q8N8M0 369 aa6.31□□□□□ -1.4
SRP54-207ENST00000555535 PRPF40AO75400 957 aaKnown RBP6.3□□□□□ -1.4
SRP54-207ENST00000555535 F13A1P00488 732 aa6.3□□□□□ -1.4
SRP54-207ENST00000555535 CEBPAP49715 358 aaPredicted RBP6.3□□□□□ -1.4
SRP54-207ENST00000555535 CYP2R1Q6VVX0 501 aa6.3□□□□□ -1.4
SRP54-207ENST00000555535 SPRED1Q7Z699 444 aa6.3□□□□□ -1.4
SRP54-207ENST00000555535 AP5S1Q9NUS5 200 aa6.3□□□□□ -1.4
SRP54-207ENST00000555535 POLR3KQ9Y2Y1 108 aaPredicted RBP6.3□□□□□ -1.4
SRP54-207ENST00000555535 F8W031 263 aaPredicted RBP6.29□□□□□ -1.4
SRP54-207ENST00000555535 DNAJA2O60884 412 aa6.29□□□□□ -1.4
SRP54-207ENST00000555535 CLEC3AO75596 197 aa6.29□□□□□ -1.4
SRP54-207ENST00000555535 P4HBP07237 508 aaKnown RBP6.29□□□□□ -1.4
SRP54-207ENST00000555535 ASGR2P07307 311 aa6.29□□□□□ -1.4
SRP54-207ENST00000555535 MPP2Q14168 576 aa6.29□□□□□ -1.4
SRP54-207ENST00000555535 ARSHQ5FYA8 562 aa6.29□□□□□ -1.4
SRP54-207ENST00000555535 TMEM52Q8NDY8 209 aa6.29□□□□□ -1.4
SRP54-207ENST00000555535 ALG3Q92685 438 aa6.29□□□□□ -1.4
SRP54-207ENST00000555535 PCED1AQ9H1Q7 454 aa6.29□□□□□ -1.4
SRP54-207ENST00000555535 GSNP06396 782 aa6.28□□□□□ -1.4
SRP54-207ENST00000555535 TAF1CQ15572 869 aaPredicted RBP6.28□□□□□ -1.4
SRP54-207ENST00000555535 ADAMTS17Q8TE56 1095 aa6.28□□□□□ -1.4
SRP54-207ENST00000555535 CPA5Q8WXQ8 436 aa6.28□□□□□ -1.4
SRP54-207ENST00000555535 VPS11Q9H270 941 aa6.28□□□□□ -1.4
SRP54-207ENST00000555535 GMIPQ9P107 970 aa6.28□□□□□ -1.4
SRP54-207ENST00000555535 PCDHB12Q9Y5F1 795 aa6.28□□□□□ -1.4
SRP54-207ENST00000555535 SMARCA5O60264 1052 aaPredicted RBP6.27□□□□□ -1.41
SRP54-207ENST00000555535 SURF1Q15526 300 aa6.27□□□□□ -1.41
SRP54-207ENST00000555535 REC114Q7Z4M0 266 aa6.27□□□□□ -1.41
SRP54-207ENST00000555535 RGS22Q8NE09 1264 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms