RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 ZSWIM5Q9P217 1185 aa6.29□□□□□ -1.4
KTN1-222ENST00000555506 PRKAB1Q9Y478 270 aa6.29□□□□□ -1.4
KTN1-222ENST00000555506 GYS2P54840 703 aa6.28□□□□□ -1.4
KTN1-222ENST00000555506 TCEA2Q15560 299 aa6.28□□□□□ -1.4
KTN1-222ENST00000555506 PTPROQ16827 1216 aa6.28□□□□□ -1.4
KTN1-222ENST00000555506 ANKRD39Q53RE8 183 aa6.28□□□□□ -1.4
KTN1-222ENST00000555506 TAF7LQ5H9L4 462 aa6.28□□□□□ -1.4
KTN1-222ENST00000555506 TMEM67Q5HYA8 995 aa6.28□□□□□ -1.4
KTN1-222ENST00000555506 SLC23A3Q6PIS1 610 aa6.28□□□□□ -1.4
KTN1-222ENST00000555506 LRRN4CLQ8ND94 238 aa6.28□□□□□ -1.4
KTN1-222ENST00000555506 PIWIL2Q8TC59 973 aaKnown RBP6.28□□□□□ -1.4
KTN1-222ENST00000555506 RNF141Q8WVD5 230 aa6.28□□□□□ -1.4
KTN1-222ENST00000555506 GPATCH3Q96I76 525 aa6.28□□□□□ -1.4
KTN1-222ENST00000555506 ZNF512BQ96KM6 892 aaPredicted RBP6.28□□□□□ -1.4
KTN1-222ENST00000555506 KREMEN1Q96MU8 473 aa6.28□□□□□ -1.4
KTN1-222ENST00000555506 MKRN2Q9H000 416 aaKnown RBP6.28□□□□□ -1.4
KTN1-222ENST00000555506 DUSP15Q9H1R2 295 aaPredicted RBP6.28□□□□□ -1.4
KTN1-222ENST00000555506 CARS2Q9HA77 564 aaKnown RBP6.28□□□□□ -1.4
KTN1-222ENST00000555506 RNF4P78317 190 aa6.28□□□□□ -1.4
KTN1-222ENST00000555506 TKFCQ3LXA3 575 aa6.28□□□□□ -1.4
KTN1-222ENST00000555506 NBPF12Q5TAG4 269 aaPredicted RBP6.28□□□□□ -1.4
KTN1-222ENST00000555506 DCAF15Q66K64 600 aa6.28□□□□□ -1.4
KTN1-222ENST00000555506 THAP5Q7Z6K1 395 aa6.28□□□□□ -1.4
KTN1-222ENST00000555506 FILIP1Q7Z7B0 1213 aa6.28□□□□□ -1.4
KTN1-222ENST00000555506 KSR1Q8IVT5 923 aa6.28□□□□□ -1.4
KTN1-222ENST00000555506 DTWD2Q8NBA8 298 aa6.28□□□□□ -1.4
KTN1-222ENST00000555506 VWCEQ96DN2 955 aa6.28□□□□□ -1.4
KTN1-222ENST00000555506 KLHL25Q9H0H3 589 aa6.28□□□□□ -1.4
KTN1-222ENST00000555506 GBP3Q9H0R5 595 aa6.28□□□□□ -1.4
KTN1-222ENST00000555506 A0A1W2PQU0 124 aa6.27□□□□□ -1.41
KTN1-222ENST00000555506 PPP1R12AO14974 1030 aaPredicted RBP6.27□□□□□ -1.41
KTN1-222ENST00000555506 PAPLNO95428 1278 aa6.27□□□□□ -1.41
KTN1-222ENST00000555506 ASMTLO95671 621 aa6.27□□□□□ -1.41
KTN1-222ENST00000555506 SRFP11831 508 aa6.27□□□□□ -1.41
KTN1-222ENST00000555506 C7orf61Q8IZ16 206 aa6.27□□□□□ -1.41
KTN1-222ENST00000555506 ZCRB1Q8TBF4 217 aaKnown RBP6.27□□□□□ -1.41
KTN1-222ENST00000555506 SLC38A3Q99624 504 aa6.27□□□□□ -1.41
KTN1-222ENST00000555506 ASPNQ9BXN1 380 aa6.27□□□□□ -1.41
KTN1-222ENST00000555506 SPC25Q9HBM1 224 aa6.27□□□□□ -1.41
KTN1-222ENST00000555506 ARHGEF4Q9NR80 690 aa6.27□□□□□ -1.41
KTN1-222ENST00000555506 IFT57Q9NWB7 429 aa6.27□□□□□ -1.41
KTN1-222ENST00000555506 LMCD1Q9NZU5 365 aa6.27□□□□□ -1.41
KTN1-222ENST00000555506 LRP2BPQ9P2M1 347 aa6.27□□□□□ -1.41
KTN1-222ENST00000555506 APEX2Q9UBZ4 518 aa6.27□□□□□ -1.41
KTN1-222ENST00000555506 CCDC163A0A0D9SF12 145 aa6.26□□□□□ -1.41
KTN1-222ENST00000555506 SHOXO15266 292 aa6.26□□□□□ -1.41
KTN1-222ENST00000555506 DNAJC6O75061 913 aa6.26□□□□□ -1.41
KTN1-222ENST00000555506 CD247P20963 164 aa6.26□□□□□ -1.41
KTN1-222ENST00000555506 AUHQ13825 339 aaKnown RBP6.26□□□□□ -1.41
KTN1-222ENST00000555506 HSP90AA2PQ14568 343 aaPredicted RBP6.26□□□□□ -1.41
KTN1-222ENST00000555506 ADAT2Q7Z6V5 191 aaKnown RBP6.26□□□□□ -1.41
KTN1-222ENST00000555506 ZNF513Q8N8E2 541 aaPredicted RBP6.26□□□□□ -1.41
KTN1-222ENST00000555506 FGD4Q96M96 766 aa6.26□□□□□ -1.41
KTN1-222ENST00000555506 BRINP2Q9C0B6 783 aa6.26□□□□□ -1.41
KTN1-222ENST00000555506 WHRNQ9P202 907 aa6.26□□□□□ -1.41
KTN1-222ENST00000555506 ZNF451Q9Y4E5 1061 aa6.26□□□□□ -1.41
KTN1-222ENST00000555506 PPM1BO75688 479 aa6.25□□□□□ -1.41
KTN1-222ENST00000555506 ESR1P03372 595 aa6.25□□□□□ -1.41
KTN1-222ENST00000555506 ITGAVP06756 1048 aa6.25□□□□□ -1.41
KTN1-222ENST00000555506 IBSPP21815 317 aaPredicted RBP6.25□□□□□ -1.41
KTN1-222ENST00000555506 TPP2P29144 1249 aaPredicted RBP6.25□□□□□ -1.41
KTN1-222ENST00000555506 PPP2R2AP63151 447 aa6.25□□□□□ -1.41
KTN1-222ENST00000555506 ATG4DQ86TL0 474 aaPredicted RBP6.25□□□□□ -1.41
KTN1-222ENST00000555506 PPP1R14AQ96A00 147 aa6.25□□□□□ -1.41
KTN1-222ENST00000555506 GPR62Q9BZJ7 368 aa6.25□□□□□ -1.41
KTN1-222ENST00000555506 KCNH3Q9ULD8 1083 aa6.25□□□□□ -1.41
KTN1-222ENST00000555506 PLAAQ9Y263 795 aa6.25□□□□□ -1.41
KTN1-222ENST00000555506 CD2APQ9Y5K6 639 aa6.25□□□□□ -1.41
KTN1-222ENST00000555506 TRAV20A0A0B4J274 112 aa6.24□□□□□ -1.41
KTN1-222ENST00000555506 SHISA3A0PJX4 238 aa6.24□□□□□ -1.41
KTN1-222ENST00000555506 BIN1O00499 593 aa6.24□□□□□ -1.41
KTN1-222ENST00000555506 GAB4Q2WGN9 574 aa6.24□□□□□ -1.41
KTN1-222ENST00000555506 FOXB2Q5VYV0 432 aa6.24□□□□□ -1.41
KTN1-222ENST00000555506 ZNF227Q86WZ6 799 aa6.24□□□□□ -1.41
KTN1-222ENST00000555506 BVESQ8NE79 360 aa6.24□□□□□ -1.41
KTN1-222ENST00000555506 RCC1LQ96I51 464 aaKnown RBP6.24□□□□□ -1.41
KTN1-222ENST00000555506 CDC6Q99741 560 aa6.24□□□□□ -1.41
KTN1-222ENST00000555506 AARSD1Q9BTE6 412 aaKnown RBP6.24□□□□□ -1.41
KTN1-222ENST00000555506 GP6Q9HCN6 339 aa6.24□□□□□ -1.41
KTN1-222ENST00000555506 C19orf73Q9NVV2 129 aa6.24□□□□□ -1.41
KTN1-222ENST00000555506 SUGT1Q9Y2Z0 365 aa6.24□□□□□ -1.41
KTN1-222ENST00000555506 PCDHB12Q9Y5F1 795 aa6.24□□□□□ -1.41
KTN1-222ENST00000555506 hCG_2014768A0A024R1R8 64 aa6.23□□□□□ -1.41
KTN1-222ENST00000555506 ITGA4P13612 1032 aa6.23□□□□□ -1.41
KTN1-222ENST00000555506 NBPF9Q3BBW0 867 aa6.23□□□□□ -1.41
KTN1-222ENST00000555506 DALRD3Q5D0E6 543 aaKnown RBP6.23□□□□□ -1.41
KTN1-222ENST00000555506 TSPYL5Q86VY4 417 aaPredicted RBP6.23□□□□□ -1.41
KTN1-222ENST00000555506 CREG2Q8IUH2 290 aa6.23□□□□□ -1.41
KTN1-222ENST00000555506 KISS1RQ969F8 398 aaPredicted RBP6.23□□□□□ -1.41
KTN1-222ENST00000555506 EXOC2Q96KP1 924 aa6.23□□□□□ -1.41
KTN1-222ENST00000555506 IPO9Q96P70 1041 aaKnown RBP6.23□□□□□ -1.41
KTN1-222ENST00000555506 DHRS4Q9BTZ2 278 aa6.23□□□□□ -1.41
KTN1-222ENST00000555506 TRIT1Q9H3H1 467 aaKnown RBP6.23□□□□□ -1.41
KTN1-222ENST00000555506 GPATCH2Q9NW75 528 aa6.23□□□□□ -1.41
KTN1-222ENST00000555506 CTNND2Q9UQB3 1225 aa6.23□□□□□ -1.41
KTN1-222ENST00000555506 NOP58Q9Y2X3 529 aaKnown RBP6.23□□□□□ -1.41
KTN1-222ENST00000555506 COL4A3BPQ9Y5P4 624 aa6.23□□□□□ -1.41
KTN1-222ENST00000555506 CARMIL2Q6F5E8 1435 aa6.23□□□□□ -1.41
KTN1-222ENST00000555506 A0A087WZG4 1122 aa6.22□□□□□ -1.41
KTN1-222ENST00000555506 NOP56O00567 594 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms