RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 IRX3P78415 501 aaPredicted RBP11.69□□□□□ -0.54
NEK9-205ENST00000555405 MYSM1Q5VVJ2 828 aa11.69□□□□□ -0.54
NEK9-205ENST00000555405 NT5C2P49902 561 aa11.69□□□□□ -0.54
NEK9-205ENST00000555405 LETM2Q2VYF4 491 aa11.69□□□□□ -0.54
NEK9-205ENST00000555405 TIAM2Q8IVF5 1701 aa11.69□□□□□ -0.54
NEK9-205ENST00000555405 NOSTRINQ8IVI9 506 aa11.69□□□□□ -0.54
NEK9-205ENST00000555405 WNK4Q96J92 1243 aa11.69□□□□□ -0.54
NEK9-205ENST00000555405 RIOX1Q9H6W3 641 aa11.69□□□□□ -0.54
NEK9-205ENST00000555405 PSTPIP2Q9H939 334 aa11.69□□□□□ -0.54
NEK9-205ENST00000555405 CCPG1Q9ULG6 757 aa11.69□□□□□ -0.54
NEK9-205ENST00000555405 PLIN4Q96Q06 1357 aa11.69□□□□□ -0.54
NEK9-205ENST00000555405 STXBP3O00186 592 aa11.68□□□□□ -0.54
NEK9-205ENST00000555405 TRAK2O60296 914 aa11.68□□□□□ -0.54
NEK9-205ENST00000555405 PPP1R11O60927 126 aaPredicted RBP11.68□□□□□ -0.54
NEK9-205ENST00000555405 USP14P54578 494 aa11.68□□□□□ -0.54
NEK9-205ENST00000555405 MAP3K10Q02779 954 aa11.68□□□□□ -0.54
NEK9-205ENST00000555405 CHADLQ6NUI6 762 aa11.68□□□□□ -0.54
NEK9-205ENST00000555405 GMCL1P1Q8NEA9 526 aa11.68□□□□□ -0.54
NEK9-205ENST00000555405 CCDC148Q8NFR7 591 aa11.68□□□□□ -0.54
NEK9-205ENST00000555405 AMNQ9BXJ7 453 aa11.68□□□□□ -0.54
NEK9-205ENST00000555405 KIAA1683Q9H0B3 1180 aa11.68□□□□□ -0.54
NEK9-205ENST00000555405 BARHL2Q9NY43 387 aa11.68□□□□□ -0.54
NEK9-205ENST00000555405 RBM27Q9P2N5 1060 aaKnown RBP11.68□□□□□ -0.54
NEK9-205ENST00000555405 MYH8P13535 1937 aa11.68□□□□□ -0.54
NEK9-205ENST00000555405 PSME4Q14997 1843 aa11.68□□□□□ -0.54
NEK9-205ENST00000555405 SNHG28P0DPA3 235 aa11.68□□□□□ -0.54
NEK9-205ENST00000555405 ADCY7P51828 1080 aa11.68□□□□□ -0.54
NEK9-205ENST00000555405 TREML2Q5T2D2 321 aa11.68□□□□□ -0.54
NEK9-205ENST00000555405 ERO1BQ86YB8 467 aa11.68□□□□□ -0.54
NEK9-205ENST00000555405 GMCL1Q96IK5 515 aa11.68□□□□□ -0.54
NEK9-205ENST00000555405 SLF1Q9BQI6 1058 aa11.68□□□□□ -0.54
NEK9-205ENST00000555405 STK36Q9NRP7 1315 aa11.68□□□□□ -0.54
NEK9-205ENST00000555405 YY1P25490 414 aa11.68□□□□□ -0.54
NEK9-205ENST00000555405 ZNF157P51786 506 aaPredicted RBP11.68□□□□□ -0.54
NEK9-205ENST00000555405 PRPF38AQ8NAV1 312 aaKnown RBP11.68□□□□□ -0.54
NEK9-205ENST00000555405 CCDC12Q8WUD4 166 aaPredicted RBP11.68□□□□□ -0.54
NEK9-205ENST00000555405 MAP3K14Q99558 947 aa11.68□□□□□ -0.54
NEK9-205ENST00000555405 ZNF112Q9UJU3 913 aa11.68□□□□□ -0.54
NEK9-205ENST00000555405 CFAP45Q9UL16 551 aa11.68□□□□□ -0.54
NEK9-205ENST00000555405 PCDHB6Q9Y5E3 794 aa11.68□□□□□ -0.54
NEK9-205ENST00000555405 DDX11L8A8MPP1 907 aa11.67□□□□□ -0.54
NEK9-205ENST00000555405 ZBED4O75132 1171 aa11.67□□□□□ -0.54
NEK9-205ENST00000555405 CALML3P27482 149 aa11.67□□□□□ -0.54
NEK9-205ENST00000555405 GNA11P29992 359 aa11.67□□□□□ -0.54
NEK9-205ENST00000555405 CAVIN1Q6NZI2 390 aaKnown RBP11.67□□□□□ -0.54
NEK9-205ENST00000555405 PHF20Q9BVI0 1012 aa11.67□□□□□ -0.54
NEK9-205ENST00000555405 DICER1Q9UPY3 1922 aaKnown RBP11.67□□□□□ -0.54
NEK9-205ENST00000555405 LAMB1P07942 1786 aa11.67□□□□□ -0.54
NEK9-205ENST00000555405 CCAR1Q8IX12 1150 aaKnown RBP11.67□□□□□ -0.54
NEK9-205ENST00000555405 REXO1Q8N1G1 1221 aaKnown RBP11.67□□□□□ -0.54
NEK9-205ENST00000555405 FEM1BQ9UK73 627 aa11.67□□□□□ -0.54
NEK9-205ENST00000555405 WDR46O15213 610 aaKnown RBP11.67□□□□□ -0.54
NEK9-205ENST00000555405 NOVP48745 357 aa11.67□□□□□ -0.54
NEK9-205ENST00000555405 LEO1Q8WVC0 666 aaPredicted RBP11.67□□□□□ -0.54
NEK9-205ENST00000555405 NOL7Q9UMY1 257 aaKnown RBP11.67□□□□□ -0.54
NEK9-205ENST00000555405 PCDHA4Q9UN74 947 aa11.67□□□□□ -0.54
NEK9-205ENST00000555405 AFG3L2Q9Y4W6 797 aa11.67□□□□□ -0.54
NEK9-205ENST00000555405 MRPL12P52815 198 aaKnown RBP11.66□□□□□ -0.54
NEK9-205ENST00000555405 SMCR8Q8TEV9 937 aaPredicted RBP11.66□□□□□ -0.54
NEK9-205ENST00000555405 CLIC6Q96NY7 704 aa11.66□□□□□ -0.54
NEK9-205ENST00000555405 CYP2C8P10632 490 aa11.66□□□□□ -0.54
NEK9-205ENST00000555405 ANO1Q5XXA6 986 aa11.66□□□□□ -0.54
NEK9-205ENST00000555405 BRAPQ7Z569 592 aa11.66□□□□□ -0.54
NEK9-205ENST00000555405 SSC5DA1L4H1 1573 aa11.65□□□□□ -0.54
NEK9-205ENST00000555405 ZNF76P36508 570 aa11.65□□□□□ -0.54
NEK9-205ENST00000555405 CST9Q5W186 159 aa11.65□□□□□ -0.54
NEK9-205ENST00000555405 TRMT1LQ7Z2T5 733 aaKnown RBP11.65□□□□□ -0.54
NEK9-205ENST00000555405 FAM160B2Q86V87 743 aa11.65□□□□□ -0.54
NEK9-205ENST00000555405 PDILTQ8N807 584 aa11.65□□□□□ -0.54
NEK9-205ENST00000555405 LPAR1Q92633 364 aa11.65□□□□□ -0.54
NEK9-205ENST00000555405 CUL5Q93034 780 aa11.65□□□□□ -0.54
NEK9-205ENST00000555405 P2RX7Q99572 595 aaKnown RBP11.65□□□□□ -0.54
NEK9-205ENST00000555405 WDR18Q9BV38 432 aa11.65□□□□□ -0.54
NEK9-205ENST00000555405 LMBRD1Q9NUN5 540 aa11.65□□□□□ -0.54
NEK9-205ENST00000555405 PKD2L1Q9P0L9 805 aa11.65□□□□□ -0.54
NEK9-205ENST00000555405 ZNF646O15015 1829 aaPredicted RBP11.65□□□□□ -0.54
NEK9-205ENST00000555405 C19orf81C9J6K1 198 aa11.65□□□□□ -0.54
NEK9-205ENST00000555405 WNT7AO00755 349 aa11.65□□□□□ -0.54
NEK9-205ENST00000555405 CCNT1O60563 726 aaKnown RBP11.65□□□□□ -0.54
NEK9-205ENST00000555405 COG2Q14746 738 aa11.65□□□□□ -0.54
NEK9-205ENST00000555405 CAMK4Q16566 473 aa11.65□□□□□ -0.54
NEK9-205ENST00000555405 SNRNP48Q6IEG0 339 aaKnown RBP11.65□□□□□ -0.54
NEK9-205ENST00000555405 RASSF8Q8NHQ8 419 aa11.65□□□□□ -0.54
NEK9-205ENST00000555405 TBCKQ8TEA7 893 aa11.65□□□□□ -0.54
NEK9-205ENST00000555405 SCAND2PQ9GZW5 306 aaPredicted RBP11.65□□□□□ -0.54
NEK9-205ENST00000555405 CCL15-CCL14A0A0B4J2E2 113 aa11.65□□□□□ -0.54
NEK9-205ENST00000555405 SPTLC2O15270 562 aa11.65□□□□□ -0.54
NEK9-205ENST00000555405 CCL15Q16663 113 aa11.65□□□□□ -0.54
NEK9-205ENST00000555405 NCAPG2Q86XI2 1143 aa11.65□□□□□ -0.54
NEK9-205ENST00000555405 GJA10Q969M2 543 aa11.65□□□□□ -0.54
NEK9-205ENST00000555405 PURBQ96QR8 312 aaKnown RBP11.65□□□□□ -0.54
NEK9-205ENST00000555405 PCDHA6Q9UN73 950 aa11.65□□□□□ -0.54
NEK9-205ENST00000555405 PCDHA8Q9Y5H6 950 aa11.65□□□□□ -0.54
NEK9-205ENST00000555405 SPDYE3A6NKU9 549 aa11.64□□□□□ -0.55
NEK9-205ENST00000555405 CDC25AP30304 524 aa11.64□□□□□ -0.55
NEK9-205ENST00000555405 TTC38Q5R3I4 469 aa11.64□□□□□ -0.55
NEK9-205ENST00000555405 FOXP1Q9H334 677 aaPredicted RBP11.64□□□□□ -0.55
NEK9-205ENST00000555405 MYH4Q9Y623 1939 aa11.64□□□□□ -0.55
NEK9-205ENST00000555405 GJA5P36382 358 aa11.64□□□□□ -0.55
NEK9-205ENST00000555405 HTRA3P83110 453 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms