RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 ATP2B1P20020 1258 aa26.82■■□□□ 1.88
STRN3-207ENST00000555358 TGFB2P61812 414 aa26.82■■□□□ 1.88
STRN3-207ENST00000555358 TAF3Q5VWG9 929 aa26.82■■□□□ 1.88
STRN3-207ENST00000555358 DGKHQ86XP1 1220 aa26.82■■□□□ 1.88
STRN3-207ENST00000555358 ZFPM1Q8IX07 1006 aa26.82■■□□□ 1.88
STRN3-207ENST00000555358 LARGE2Q8N3Y3 721 aa26.82■■□□□ 1.88
STRN3-207ENST00000555358 RSRC2Q7L4I2 434 aaKnown RBP26.81■■□□□ 1.88
STRN3-207ENST00000555358 DESI2Q9BSY9 194 aa26.81■■□□□ 1.88
STRN3-207ENST00000555358 MRIQ9BWK5 157 aa26.81■■□□□ 1.88
STRN3-207ENST00000555358 EPC1Q9H2F5 836 aa26.81■■□□□ 1.88
STRN3-207ENST00000555358 KAT14Q9H8E8 782 aa26.81■■□□□ 1.88
STRN3-207ENST00000555358 TCP11L1Q9NUJ3 509 aa26.81■■□□□ 1.88
STRN3-207ENST00000555358 MYH8P13535 1937 aa26.81■■□□□ 1.88
STRN3-207ENST00000555358 FAM205CA6NFA0 338 aa26.81■■□□□ 1.88
STRN3-207ENST00000555358 ANKS1AQ92625 1134 aa26.81■■□□□ 1.88
STRN3-207ENST00000555358 RNF26Q9BY78 433 aaPredicted RBP26.81■■□□□ 1.88
STRN3-207ENST00000555358 RBM28Q9NW13 759 aaKnown RBP26.81■■□□□ 1.88
STRN3-207ENST00000555358 RAD17O75943 681 aa26.8■■□□□ 1.88
STRN3-207ENST00000555358 SEC31AO94979 1220 aaKnown RBP26.8■■□□□ 1.88
STRN3-207ENST00000555358 NT5C2P49902 561 aa26.8■■□□□ 1.88
STRN3-207ENST00000555358 HDLBPQ00341 1268 aaKnown RBP26.8■■□□□ 1.88
STRN3-207ENST00000555358 PPP2R3AQ06190 1150 aa26.8■■□□□ 1.88
STRN3-207ENST00000555358 GABPAQ06546 454 aa26.8■■□□□ 1.88
STRN3-207ENST00000555358 TMTC3Q6ZXV5 915 aa26.8■■□□□ 1.88
STRN3-207ENST00000555358 PNMA1Q8ND90 353 aa26.8■■□□□ 1.88
STRN3-207ENST00000555358 MRPL44Q9H9J2 332 aaKnown RBP26.8■■□□□ 1.88
STRN3-207ENST00000555358 STX8Q9UNK0 236 aa26.8■■□□□ 1.88
STRN3-207ENST00000555358 TEX33O43247 280 aa26.8■■□□□ 1.88
STRN3-207ENST00000555358 SLURP2P0DP57 97 aa26.8■■□□□ 1.88
STRN3-207ENST00000555358 MTF1Q14872 753 aa26.8■■□□□ 1.88
STRN3-207ENST00000555358 CT47A1Q5JQC4 288 aaPredicted RBP26.8■■□□□ 1.88
STRN3-207ENST00000555358 SH3RF1Q7Z6J0 888 aa26.8■■□□□ 1.88
STRN3-207ENST00000555358 GPR161Q8N6U8 529 aaKnown RBP26.8■■□□□ 1.88
STRN3-207ENST00000555358 CTCFLQ8NI51 663 aaPredicted RBP26.8■■□□□ 1.88
STRN3-207ENST00000555358 PANX2Q96RD6 677 aa26.8■■□□□ 1.88
STRN3-207ENST00000555358 BRCA1P38398 1863 aaKnown RBP26.79■■□□□ 1.88
STRN3-207ENST00000555358 ATP8B1O43520 1251 aa26.79■■□□□ 1.88
STRN3-207ENST00000555358 CUL4BQ13620 913 aa26.79■■□□□ 1.88
STRN3-207ENST00000555358 SRBD1Q8N5C6 995 aaKnown RBP26.79■■□□□ 1.88
STRN3-207ENST00000555358 UBXN6Q9BZV1 441 aa26.79■■□□□ 1.88
STRN3-207ENST00000555358 AKR1B15C9JRZ8 316 aaPredicted RBP26.78■■□□□ 1.88
STRN3-207ENST00000555358 CD44P16070 742 aaKnown RBP26.78■■□□□ 1.88
STRN3-207ENST00000555358 TCP10Q12799 353 aa26.78■■□□□ 1.88
STRN3-207ENST00000555358 PKN1Q16512 942 aa26.78■■□□□ 1.88
STRN3-207ENST00000555358 EARS2Q5JPH6 523 aaKnown RBP26.78■■□□□ 1.88
STRN3-207ENST00000555358 NEDD1Q8NHV4 660 aa26.78■■□□□ 1.88
STRN3-207ENST00000555358 DHX58Q96C10 678 aa26.78■■□□□ 1.88
STRN3-207ENST00000555358 SERPINA10Q9UK55 444 aa26.78■■□□□ 1.88
STRN3-207ENST00000555358 V9GY48 417 aaPredicted RBP26.78■■□□□ 1.88
STRN3-207ENST00000555358 UTRNP46939 3433 aa26.78■■□□□ 1.88
STRN3-207ENST00000555358 TRIM75PA6NK02 468 aa26.78■■□□□ 1.88
STRN3-207ENST00000555358 PBX1P40424 430 aa26.78■■□□□ 1.88
STRN3-207ENST00000555358 SPATA1Q5VX52 437 aa26.78■■□□□ 1.88
STRN3-207ENST00000555358 EPSTI1Q96J88 318 aa26.78■■□□□ 1.88
STRN3-207ENST00000555358 TMEM47Q9BQJ4 181 aa26.78■■□□□ 1.88
STRN3-207ENST00000555358 SOWAHDA6NJG2 315 aa26.77■■□□□ 1.88
STRN3-207ENST00000555358 KARSQ15046 597 aaKnown RBP26.77■■□□□ 1.88
STRN3-207ENST00000555358 CC2D1AQ6P1N0 951 aaPredicted RBP26.77■■□□□ 1.88
STRN3-207ENST00000555358 PHF20Q9BVI0 1012 aa26.77■■□□□ 1.88
STRN3-207ENST00000555358 MTMR7Q9Y216 660 aa26.77■■□□□ 1.88
STRN3-207ENST00000555358 CNTNAP5Q8WYK1 1306 aa26.77■■□□□ 1.88
STRN3-207ENST00000555358 PSMD14O00487 310 aa26.77■■□□□ 1.88
STRN3-207ENST00000555358 SASH3O75995 380 aa26.77■■□□□ 1.88
STRN3-207ENST00000555358 TBC1D8O95759 1140 aa26.77■■□□□ 1.88
STRN3-207ENST00000555358 CDKAL1Q5VV42 579 aa26.77■■□□□ 1.88
STRN3-207ENST00000555358 PAGE5Q96GU1 130 aa26.77■■□□□ 1.88
STRN3-207ENST00000555358 VPS54Q9P1Q0 977 aa26.77■■□□□ 1.88
STRN3-207ENST00000555358 SERPINB13Q9UIV8 391 aa26.77■■□□□ 1.88
STRN3-207ENST00000555358 AKAP17AQ02040 695 aaKnown RBP26.76■■□□□ 1.87
STRN3-207ENST00000555358 CCDC178Q5BJE1 867 aa26.76■■□□□ 1.87
STRN3-207ENST00000555358 DALRD3Q5D0E6 543 aaKnown RBP26.76■■□□□ 1.87
STRN3-207ENST00000555358 CEP95Q96GE4 821 aa26.76■■□□□ 1.87
STRN3-207ENST00000555358 ADD3Q9UEY8 706 aaKnown RBP26.76■■□□□ 1.87
STRN3-207ENST00000555358 FAM198AQ9UFP1 575 aa26.76■■□□□ 1.87
STRN3-207ENST00000555358 SYNRGQ9UMZ2 1314 aa26.76■■□□□ 1.87
STRN3-207ENST00000555358 PRPF3O43395 683 aaKnown RBP26.75■■□□□ 1.87
STRN3-207ENST00000555358 CCDC175P0C221 793 aa26.75■■□□□ 1.87
STRN3-207ENST00000555358 RAD9BQ6WBX8 426 aa26.75■■□□□ 1.87
STRN3-207ENST00000555358 RASGRP2Q7LDG7 609 aa26.75■■□□□ 1.87
STRN3-207ENST00000555358 STAG2Q8N3U4 1231 aa26.75■■□□□ 1.87
STRN3-207ENST00000555358 SIPA1L1O43166 1804 aa26.75■■□□□ 1.87
STRN3-207ENST00000555358 CASP1P29466 404 aa26.75■■□□□ 1.87
STRN3-207ENST00000555358 CYP2C19P33261 490 aa26.75■■□□□ 1.87
STRN3-207ENST00000555358 AFMP43652 599 aa26.75■■□□□ 1.87
STRN3-207ENST00000555358 TEX35Q5T0J7 233 aa26.75■■□□□ 1.87
STRN3-207ENST00000555358 RSBN1LQ6PCB5 846 aaPredicted RBP26.75■■□□□ 1.87
STRN3-207ENST00000555358 UPF1Q92900 1129 aaKnown RBP eCLIP26.75■■□□□ 1.87
STRN3-207ENST00000555358 SGIP1Q9BQI5 828 aa26.75■■□□□ 1.87
STRN3-207ENST00000555358 TDRD3Q9H7E2 651 aaKnown RBP26.75■■□□□ 1.87
STRN3-207ENST00000555358 ZBTB12Q9Y330 459 aaPredicted RBP26.75■■□□□ 1.87
STRN3-207ENST00000555358 WNT7AO00755 349 aa26.74■■□□□ 1.87
STRN3-207ENST00000555358 KRT2P35908 639 aa26.74■■□□□ 1.87
STRN3-207ENST00000555358 RBL2Q08999 1139 aa26.74■■□□□ 1.87
STRN3-207ENST00000555358 DPYDQ12882 1025 aa26.74■■□□□ 1.87
STRN3-207ENST00000555358 IGSF22Q8N9C0 903 aa26.74■■□□□ 1.87
STRN3-207ENST00000555358 RABGGTAQ92696 567 aa26.74■■□□□ 1.87
STRN3-207ENST00000555358 SYMPKQ92797 1274 aaKnown RBP26.74■■□□□ 1.87
STRN3-207ENST00000555358 PRMT6Q96LA8 375 aaPredicted RBP26.74■■□□□ 1.87
STRN3-207ENST00000555358 IRX2Q9BZI1 471 aaPredicted RBP26.74■■□□□ 1.87
STRN3-207ENST00000555358 ADGRG1Q9Y653 693 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms