RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 AKR1A1P14550 325 aa13.93□□□□□ -0.18
VRK1-204ENST00000555351 GSPT1P15170 499 aaKnown RBP13.93□□□□□ -0.18
VRK1-204ENST00000555351 BMP8BP34820 402 aa13.93□□□□□ -0.18
VRK1-204ENST00000555351 KCTD1Q719H9 257 aa13.93□□□□□ -0.18
VRK1-204ENST00000555351 RANBP17Q9H2T7 1088 aaKnown RBP13.93□□□□□ -0.18
VRK1-204ENST00000555351 CEP290O15078 2479 aa13.93□□□□□ -0.18
VRK1-204ENST00000555351 LOC102724159A0A0B4J2E5 919 aa13.92□□□□□ -0.18
VRK1-204ENST00000555351 ICAM1P05362 532 aa13.92□□□□□ -0.18
VRK1-204ENST00000555351 RARBP10826 455 aa13.92□□□□□ -0.18
VRK1-204ENST00000555351 PDHBP11177 359 aa13.92□□□□□ -0.18
VRK1-204ENST00000555351 PWP2Q15269 919 aaKnown RBP13.92□□□□□ -0.18
VRK1-204ENST00000555351 CCDC96Q2M329 555 aa13.92□□□□□ -0.18
VRK1-204ENST00000555351 GPATCH4Q5T3I0 446 aaKnown RBP13.92□□□□□ -0.18
VRK1-204ENST00000555351 C1orf53Q5VUE5 145 aa13.92□□□□□ -0.18
VRK1-204ENST00000555351 CHRDL2Q6WN34 429 aa13.92□□□□□ -0.18
VRK1-204ENST00000555351 C7orf61Q8IZ16 206 aa13.92□□□□□ -0.18
VRK1-204ENST00000555351 FAM133AQ8N9E0 248 aa13.92□□□□□ -0.18
VRK1-204ENST00000555351 KRT23Q9C075 422 aa13.92□□□□□ -0.18
VRK1-204ENST00000555351 MAF1Q9H063 256 aa13.92□□□□□ -0.18
VRK1-204ENST00000555351 ABHD16BQ9H3Z7 469 aa13.92□□□□□ -0.18
VRK1-204ENST00000555351 ISY1Q9ULR0 285 aaKnown RBP13.92□□□□□ -0.18
VRK1-204ENST00000555351 NEDD4P46934 1319 aa13.91□□□□□ -0.18
VRK1-204ENST00000555351 POTEB2H3BUK9 544 aa13.91□□□□□ -0.18
VRK1-204ENST00000555351 ZNF543Q08ER8 600 aa13.91□□□□□ -0.18
VRK1-204ENST00000555351 SNX17Q15036 470 aa13.91□□□□□ -0.18
VRK1-204ENST00000555351 LRRC41Q15345 812 aa13.91□□□□□ -0.18
VRK1-204ENST00000555351 PRAMEF19Q5SWL8 479 aa13.91□□□□□ -0.18
VRK1-204ENST00000555351 SYDE2Q5VT97 1194 aa13.91□□□□□ -0.18
VRK1-204ENST00000555351 RNF180Q86T96 592 aa13.91□□□□□ -0.18
VRK1-204ENST00000555351 AGBL1Q96MI9 1066 aa13.91□□□□□ -0.18
VRK1-204ENST00000555351 TRERF1Q96PN7 1200 aa13.91□□□□□ -0.18
VRK1-204ENST00000555351 GDF15Q99988 308 aa13.91□□□□□ -0.18
VRK1-204ENST00000555351 SENP6Q9GZR1 1112 aaPredicted RBP13.91□□□□□ -0.18
VRK1-204ENST00000555351 XPNPEP3Q9NQH7 507 aa13.91□□□□□ -0.18
VRK1-204ENST00000555351 RNF146Q9NTX7 359 aa13.91□□□□□ -0.18
VRK1-204ENST00000555351 RBM27Q9P2N5 1060 aaKnown RBP13.91□□□□□ -0.18
VRK1-204ENST00000555351 FAM184BQ9ULE4 1060 aa13.91□□□□□ -0.18
VRK1-204ENST00000555351 ASB14A6NK59 587 aa13.9□□□□□ -0.18
VRK1-204ENST00000555351 KDM4AO75164 1064 aa13.9□□□□□ -0.18
VRK1-204ENST00000555351 SNAI1O95863 264 aaPredicted RBP13.9□□□□□ -0.18
VRK1-204ENST00000555351 CHMLP26374 656 aa13.9□□□□□ -0.18
VRK1-204ENST00000555351 IRX6P78412 446 aaPredicted RBP13.9□□□□□ -0.18
VRK1-204ENST00000555351 LRRC26Q2I0M4 334 aa13.9□□□□□ -0.18
VRK1-204ENST00000555351 FGD4Q96M96 766 aa13.9□□□□□ -0.18
VRK1-204ENST00000555351 ZSCAN10Q96SZ4 725 aaPredicted RBP13.9□□□□□ -0.18
VRK1-204ENST00000555351 TSEN34Q9BSV6 310 aaKnown RBP13.9□□□□□ -0.18
VRK1-204ENST00000555351 A1CFQ9NQ94 594 aaKnown RBP13.9□□□□□ -0.18
VRK1-204ENST00000555351 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.9□□□□□ -0.18
VRK1-204ENST00000555351 PHF24Q9UPV7 400 aa13.9□□□□□ -0.18
VRK1-204ENST00000555351 WDR19Q8NEZ3 1342 aa13.9□□□□□ -0.19
VRK1-204ENST00000555351 DUSP11O75319 330 aaKnown RBP13.89□□□□□ -0.19
VRK1-204ENST00000555351 ALAS1P13196 640 aa13.89□□□□□ -0.19
VRK1-204ENST00000555351 SLC4A3P48751 1232 aa13.89□□□□□ -0.19
VRK1-204ENST00000555351 FXR1P51114 621 aaKnown RBP eCLIP13.89□□□□□ -0.19
VRK1-204ENST00000555351 ACVR2BQ13705 512 aa13.89□□□□□ -0.19
VRK1-204ENST00000555351 GJC2Q5T442 439 aaPredicted RBP13.89□□□□□ -0.19
VRK1-204ENST00000555351 HOMER2Q9NSB8 354 aa13.89□□□□□ -0.19
VRK1-204ENST00000555351 CYP39A1Q9NYL5 469 aa13.89□□□□□ -0.19
VRK1-204ENST00000555351 ZSWIM5Q9P217 1185 aa13.89□□□□□ -0.19
VRK1-204ENST00000555351 PCDH10Q9P2E7 1040 aa13.89□□□□□ -0.19
VRK1-204ENST00000555351 CCPG1Q9ULG6 757 aa13.89□□□□□ -0.19
VRK1-204ENST00000555351 U3KPZ7 1027 aaPredicted RBP13.89□□□□□ -0.19
VRK1-204ENST00000555351 B4E1Z4 1266 aa13.88□□□□□ -0.19
VRK1-204ENST00000555351 SGSM2O43147 1006 aa13.88□□□□□ -0.19
VRK1-204ENST00000555351 ADAMTS4O75173 837 aa13.88□□□□□ -0.19
VRK1-204ENST00000555351 TAL1P17542 331 aaPredicted RBP13.88□□□□□ -0.19
VRK1-204ENST00000555351 CST5P28325 142 aaPredicted RBP13.88□□□□□ -0.19
VRK1-204ENST00000555351 NKX3-2P78367 333 aa13.88□□□□□ -0.19
VRK1-204ENST00000555351 ASPRV1Q53RT3 343 aa13.88□□□□□ -0.19
VRK1-204ENST00000555351 TTBK2Q6IQ55 1244 aa13.88□□□□□ -0.19
VRK1-204ENST00000555351 CCDC174Q6PII3 467 aa13.88□□□□□ -0.19
VRK1-204ENST00000555351 SLC39A5Q6ZMH5 540 aa13.88□□□□□ -0.19
VRK1-204ENST00000555351 ARMCX2Q7L311 632 aa13.88□□□□□ -0.19
VRK1-204ENST00000555351 RASGRP2Q7LDG7 609 aa13.88□□□□□ -0.19
VRK1-204ENST00000555351 PNMA1Q8ND90 353 aa13.88□□□□□ -0.19
VRK1-204ENST00000555351 MORC4Q8TE76 937 aa13.88□□□□□ -0.19
VRK1-204ENST00000555351 IL25Q9H293 177 aa13.88□□□□□ -0.19
VRK1-204ENST00000555351 KAT14Q9H8E8 782 aa13.88□□□□□ -0.19
VRK1-204ENST00000555351 ADD3Q9UEY8 706 aaKnown RBP13.88□□□□□ -0.19
VRK1-204ENST00000555351 SMCHD1A6NHR9 2005 aa13.87□□□□□ -0.19
VRK1-204ENST00000555351 SOWAHBA6NEL2 793 aa13.87□□□□□ -0.19
VRK1-204ENST00000555351 MOXD2PA6NHM9 499 aa13.87□□□□□ -0.19
VRK1-204ENST00000555351 SLC16A2P36021 539 aa13.87□□□□□ -0.19
VRK1-204ENST00000555351 CNTN2Q02246 1040 aa13.87□□□□□ -0.19
VRK1-204ENST00000555351 TRDNQ13061 729 aa13.87□□□□□ -0.19
VRK1-204ENST00000555351 ANO1Q5XXA6 986 aa13.87□□□□□ -0.19
VRK1-204ENST00000555351 CCDC144CPQ8IYA2 1237 aa13.87□□□□□ -0.19
VRK1-204ENST00000555351 ENAHQ8N8S7 591 aaPredicted RBP13.87□□□□□ -0.19
VRK1-204ENST00000555351 RGS22Q8NE09 1264 aa13.87□□□□□ -0.19
VRK1-204ENST00000555351 KLHDC9Q8NEP7 349 aa13.87□□□□□ -0.19
VRK1-204ENST00000555351 UBAC1Q9BSL1 405 aa13.87□□□□□ -0.19
VRK1-204ENST00000555351 KATNBL1Q9H079 304 aa13.87□□□□□ -0.19
VRK1-204ENST00000555351 UPF3AQ9H1J1 476 aaKnown RBP13.87□□□□□ -0.19
VRK1-204ENST00000555351 SPC25Q9HBM1 224 aa13.87□□□□□ -0.19
VRK1-204ENST00000555351 GPCPD1Q9NPB8 672 aa13.87□□□□□ -0.19
VRK1-204ENST00000555351 MTMR7Q9Y216 660 aa13.87□□□□□ -0.19
VRK1-204ENST00000555351 TNKSO95271 1327 aa13.87□□□□□ -0.19
VRK1-204ENST00000555351 FRMPD2Q68DX3 1309 aaPredicted RBP13.87□□□□□ -0.19
VRK1-204ENST00000555351 ADCYAP1R1P41586 468 aa13.86□□□□□ -0.19
VRK1-204ENST00000555351 RTP1P59025 263 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms