RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 LCTP09848 1927 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 NID2Q14112 1375 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 DOCK1Q14185 1865 aa6.92□□□□□ -1.3
ATXN3-230ENST00000554673 DDTLA6NHG4 134 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-230ENST00000554673 FRAT2O75474 233 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-230ENST00000554673 F12P00748 615 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-230ENST00000554673 LDHBP07195 334 aaKnown RBP6.92□□□□□ -1.3
ATXN3-230ENST00000554673 VIL1P09327 827 aaKnown RBP6.92□□□□□ -1.3
ATXN3-230ENST00000554673 RASA1P20936 1047 aa6.92□□□□□ -1.3
ATXN3-230ENST00000554673 PDIA3P30101 505 aaKnown RBP6.92□□□□□ -1.3
ATXN3-230ENST00000554673 GUCY1A2P33402 732 aa6.92□□□□□ -1.3
ATXN3-230ENST00000554673 SCNN1AP37088 669 aa6.92□□□□□ -1.3
ATXN3-230ENST00000554673 RAB3GAP1Q15042 981 aa6.92□□□□□ -1.3
ATXN3-230ENST00000554673 SBK1Q52WX2 424 aa6.92□□□□□ -1.3
ATXN3-230ENST00000554673 CASC1Q6TDU7 716 aa6.92□□□□□ -1.3
ATXN3-230ENST00000554673 NBPF11Q86T75 865 aa6.92□□□□□ -1.3
ATXN3-230ENST00000554673 SIAH1Q8IUQ4 282 aa6.92□□□□□ -1.3
ATXN3-230ENST00000554673 KIAA0825Q8IV33 1275 aa6.92□□□□□ -1.3
ATXN3-230ENST00000554673 MAPKAPK5Q8IW41 473 aa6.92□□□□□ -1.3
ATXN3-230ENST00000554673 CCDC83Q8IWF9 413 aa6.92□□□□□ -1.3
ATXN3-230ENST00000554673 VWA5B2Q8N398 1253 aa6.92□□□□□ -1.3
ATXN3-230ENST00000554673 NSUN7Q8NE18 718 aaKnown RBP6.92□□□□□ -1.3
ATXN3-230ENST00000554673 SMARCC2Q8TAQ2 1214 aa6.92□□□□□ -1.3
ATXN3-230ENST00000554673 BRF1Q92994 677 aa6.92□□□□□ -1.3
ATXN3-230ENST00000554673 SPATA32Q96LK8 384 aa6.92□□□□□ -1.3
ATXN3-230ENST00000554673 BIN2Q9UBW5 565 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-230ENST00000554673 CD2APQ9Y5K6 639 aa6.92□□□□□ -1.3
ATXN3-230ENST00000554673 LTBP3Q9NS15 1303 aa6.92□□□□□ -1.3
ATXN3-230ENST00000554673 RBBP6Q7Z6E9 1792 aaKnown RBP6.91□□□□□ -1.3
ATXN3-230ENST00000554673 IGKV6D-41A0A0C4DH26 115 aa6.91□□□□□ -1.3
ATXN3-230ENST00000554673 PPIP5K2O43314 1243 aa6.91□□□□□ -1.3
ATXN3-230ENST00000554673 PRC1O43663 620 aa6.91□□□□□ -1.3
ATXN3-230ENST00000554673 PFKFB2O60825 505 aa6.91□□□□□ -1.3
ATXN3-230ENST00000554673 IGHA1P01876 353 aa6.91□□□□□ -1.3
ATXN3-230ENST00000554673 SHMT1P34896 483 aa6.91□□□□□ -1.3
ATXN3-230ENST00000554673 IARSP41252 1262 aaKnown RBP6.91□□□□□ -1.3
ATXN3-230ENST00000554673 CRKP46108 304 aa6.91□□□□□ -1.3
ATXN3-230ENST00000554673 NOVP48745 357 aa6.91□□□□□ -1.3
ATXN3-230ENST00000554673 TAGLNQ01995 201 aaKnown RBP6.91□□□□□ -1.3
ATXN3-230ENST00000554673 NCOA4Q13772 614 aa6.91□□□□□ -1.3
ATXN3-230ENST00000554673 CCDC93Q567U6 631 aa6.91□□□□□ -1.3
ATXN3-230ENST00000554673 AKNAD1Q5T1N1 836 aa6.91□□□□□ -1.3
ATXN3-230ENST00000554673 STRIP1Q5VSL9 837 aa6.91□□□□□ -1.3
ATXN3-230ENST00000554673 BLOC1S2Q6QNY1 142 aa6.91□□□□□ -1.3
ATXN3-230ENST00000554673 KIAA1211Q6ZU35 1233 aa6.91□□□□□ -1.3
ATXN3-230ENST00000554673 DHX32Q7L7V1 743 aaKnown RBP6.91□□□□□ -1.3
ATXN3-230ENST00000554673 PHTF2Q8N3S3 785 aa6.91□□□□□ -1.3
ATXN3-230ENST00000554673 TGFBRAP1Q8WUH2 860 aa6.91□□□□□ -1.3
ATXN3-230ENST00000554673 TNPO1Q92973 898 aaKnown RBP6.91□□□□□ -1.3
ATXN3-230ENST00000554673 GTF3C6Q969F1 213 aa6.91□□□□□ -1.3
ATXN3-230ENST00000554673 AIDAQ96BJ3 306 aa6.91□□□□□ -1.3
ATXN3-230ENST00000554673 ZDHHC15Q96MV8 337 aa6.91□□□□□ -1.3
ATXN3-230ENST00000554673 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.91□□□□□ -1.3
ATXN3-230ENST00000554673 GNL3LQ9NVN8 582 aaKnown RBP6.91□□□□□ -1.3
ATXN3-230ENST00000554673 TTF2Q9UNY4 1162 aaKnown RBP6.91□□□□□ -1.3
ATXN3-230ENST00000554673 COL11A1P12107 1806 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-230ENST00000554673 ZC3H4Q9UPT8 1303 aaKnown RBP6.91□□□□□ -1.3
ATXN3-230ENST00000554673 SRCAPQ6ZRS2 3230 aa6.9□□□□□ -1.3
ATXN3-230ENST00000554673 UTRNP46939 3433 aa6.9□□□□□ -1.3
ATXN3-230ENST00000554673 FZD9O00144 591 aa6.9□□□□□ -1.3
ATXN3-230ENST00000554673 ORC4O43929 436 aa6.9□□□□□ -1.3
ATXN3-230ENST00000554673 LZTS3O60299 673 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-230ENST00000554673 ADD1P35611 737 aaKnown RBP6.9□□□□□ -1.3
ATXN3-230ENST00000554673 HIRAP54198 1017 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-230ENST00000554673 FKBP1AP62942 108 aaKnown RBP6.9□□□□□ -1.3
ATXN3-230ENST00000554673 STK3Q13188 491 aa6.9□□□□□ -1.3
ATXN3-230ENST00000554673 CBLBQ13191 982 aa6.9□□□□□ -1.3
ATXN3-230ENST00000554673 NFKBIBQ15653 356 aa6.9□□□□□ -1.3
ATXN3-230ENST00000554673 NPY5RQ15761 445 aa6.9□□□□□ -1.3
ATXN3-230ENST00000554673 FAM47AQ5JRC9 791 aa6.9□□□□□ -1.3
ATXN3-230ENST00000554673 KIAA1755Q5JYT7 1200 aa6.9□□□□□ -1.3
ATXN3-230ENST00000554673 OTUD7BQ6GQQ9 843 aa6.9□□□□□ -1.3
ATXN3-230ENST00000554673 FAM173BQ6P4H8 233 aa6.9□□□□□ -1.3
ATXN3-230ENST00000554673 TAS1R3Q7RTX0 852 aa6.9□□□□□ -1.3
ATXN3-230ENST00000554673 PODNQ7Z5L7 613 aa6.9□□□□□ -1.3
ATXN3-230ENST00000554673 VPS37DQ86XT2 251 aa6.9□□□□□ -1.3
ATXN3-230ENST00000554673 RNF135Q8IUD6 432 aa6.9□□□□□ -1.3
ATXN3-230ENST00000554673 CCDC116Q8IYX3 515 aa6.9□□□□□ -1.3
ATXN3-230ENST00000554673 ENAHQ8N8S7 591 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-230ENST00000554673 UBXN4Q92575 508 aa6.9□□□□□ -1.3
ATXN3-230ENST00000554673 SYT17Q9BSW7 474 aa6.9□□□□□ -1.3
ATXN3-230ENST00000554673 ZC3H12CQ9C0D7 883 aaKnown RBP6.9□□□□□ -1.3
ATXN3-230ENST00000554673 UPF2Q9HAU5 1272 aaKnown RBP6.9□□□□□ -1.3
ATXN3-230ENST00000554673 PIM2Q9P1W9 311 aa6.9□□□□□ -1.3
ATXN3-230ENST00000554673 FKBPLQ9UIM3 349 aa6.9□□□□□ -1.3
ATXN3-230ENST00000554673 LIMCH1Q9UPQ0 1083 aa6.9□□□□□ -1.3
ATXN3-230ENST00000554673 MTMR6Q9Y217 621 aa6.9□□□□□ -1.3
ATXN3-230ENST00000554673 CYP46A1Q9Y6A2 500 aa6.9□□□□□ -1.3
ATXN3-230ENST00000554673 LOC285556D6RIA3 1793 aa6.9□□□□□ -1.31
ATXN3-230ENST00000554673 MYH7BA7E2Y1 1941 aa6.89□□□□□ -1.31
ATXN3-230ENST00000554673 MINDY4BA8MYZ0 360 aa6.89□□□□□ -1.31
ATXN3-230ENST00000554673 KIF28PB7ZC32 967 aa6.89□□□□□ -1.31
ATXN3-230ENST00000554673 DKK1O94907 266 aa6.89□□□□□ -1.31
ATXN3-230ENST00000554673 ARHGEF15O94989 841 aa6.89□□□□□ -1.31
ATXN3-230ENST00000554673 AKR1B1P15121 316 aa6.89□□□□□ -1.31
ATXN3-230ENST00000554673 CCT2P78371 535 aaKnown RBP6.89□□□□□ -1.31
ATXN3-230ENST00000554673 DPYDQ12882 1025 aa6.89□□□□□ -1.31
ATXN3-230ENST00000554673 COL19A1Q14993 1142 aa6.89□□□□□ -1.31
ATXN3-230ENST00000554673 ECM1Q16610 540 aa6.89□□□□□ -1.31
ATXN3-230ENST00000554673 NBPF9Q3BBW0 867 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms